Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_6068

Experiment: Nalidixic 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.004 mg/ml
6,888,815	-		Pf6N2E2_6066	0.74	-1.0
6,888,904	-		Pf6N2E2_6066	0.84	-0.6
6,888,904	-		Pf6N2E2_6066	0.84	-0.1
6,889,042	+				+1.2
6,889,042	+				-0.8
6,889,042	+				-0.2
6,889,042	+				-0.0
6,889,043	-				+1.0
6,889,043	-				+0.5
6,889,043	-				-1.0
6,889,043	-				+0.4
6,889,043	-				+0.4
6,889,260	-		Pf6N2E2_6067	0.28	+0.3
6,889,260	-		Pf6N2E2_6067	0.28	+1.1
6,889,260	-		Pf6N2E2_6067	0.28	-1.1
6,889,443	+		Pf6N2E2_6067	0.52	-0.8
6,889,443	+		Pf6N2E2_6067	0.52	+0.4
6,889,444	-		Pf6N2E2_6067	0.52	-1.2
6,889,444	-		Pf6N2E2_6067	0.52	+0.0
6,889,551	+		Pf6N2E2_6067	0.67	+1.9
6,889,877	+				-1.0
6,889,878	-				-0.7
6,889,893	+		Pf6N2E2_6068	0.10	-1.1
6,889,893	+		Pf6N2E2_6068	0.10	-0.2
6,889,893	+		Pf6N2E2_6068	0.10	-0.6
6,889,893	+		Pf6N2E2_6068	0.10	-0.8
6,889,894	-		Pf6N2E2_6068	0.10	-0.9
6,889,894	-		Pf6N2E2_6068	0.10	-0.9
6,889,946	+		Pf6N2E2_6068	0.16	-0.1
6,889,946	+		Pf6N2E2_6068	0.16	+0.0
6,889,946	+		Pf6N2E2_6068	0.16	-0.2
6,889,946	+		Pf6N2E2_6068	0.16	+0.7
6,889,946	+		Pf6N2E2_6068	0.16	+0.1
6,889,947	-		Pf6N2E2_6068	0.16	-1.9
6,889,947	-		Pf6N2E2_6068	0.16	-0.1
6,889,947	-		Pf6N2E2_6068	0.16	-1.5
6,889,947	-		Pf6N2E2_6068	0.16	-0.3
6,890,222	+		Pf6N2E2_6068	0.46	-0.0
6,890,223	-		Pf6N2E2_6068	0.46	-0.3
6,890,223	-		Pf6N2E2_6068	0.46	-0.1
6,890,271	+		Pf6N2E2_6068	0.51	-0.2
6,890,272	-		Pf6N2E2_6068	0.51	+0.9
6,890,310	+		Pf6N2E2_6068	0.55	-0.8
6,890,310	+		Pf6N2E2_6068	0.55	+1.6
6,890,310	+		Pf6N2E2_6068	0.55	-1.9
6,890,310	+		Pf6N2E2_6068	0.55	-0.3
6,890,310	+		Pf6N2E2_6068	0.55	-0.6
6,890,392	+		Pf6N2E2_6068	0.64	+0.9
6,890,516	+		Pf6N2E2_6068	0.77	+0.4
6,890,517	-		Pf6N2E2_6068	0.77	-0.2
6,890,588	+		Pf6N2E2_6068	0.85	-0.7
6,890,588	+		Pf6N2E2_6068	0.85	+0.0
6,890,588	+		Pf6N2E2_6068	0.85	-1.5
6,890,588	+		Pf6N2E2_6068	0.85	-1.9
6,890,588	+		Pf6N2E2_6068	0.85	-1.1
6,890,588	+		Pf6N2E2_6068	0.85	+0.1
6,890,588	+		Pf6N2E2_6068	0.85	+0.4
6,890,588	+		Pf6N2E2_6068	0.85	-1.8
6,890,588	+		Pf6N2E2_6068	0.85	-0.8
6,890,588	+		Pf6N2E2_6068	0.85	-0.3
6,890,588	+		Pf6N2E2_6068	0.85	+1.2
6,890,588	+		Pf6N2E2_6068	0.85	-0.9
6,890,588	+		Pf6N2E2_6068	0.85	+1.2
6,890,589	-		Pf6N2E2_6068	0.85	-1.5
6,890,589	-		Pf6N2E2_6068	0.85	+1.2
6,890,589	-		Pf6N2E2_6068	0.85	-0.2
6,890,589	-		Pf6N2E2_6068	0.85	+0.0
6,890,589	-		Pf6N2E2_6068	0.85	-0.9
6,890,589	-		Pf6N2E2_6068	0.85	+0.2
6,890,589	-		Pf6N2E2_6068	0.85	-0.9
6,890,594	+		Pf6N2E2_6068	0.86	-1.0
6,890,594	+		Pf6N2E2_6068	0.86	-0.5
6,890,594	+		Pf6N2E2_6068	0.86	-1.8
6,890,594	+		Pf6N2E2_6068	0.86	-0.0
6,890,595	-		Pf6N2E2_6068	0.86	-0.7
6,890,595	-		Pf6N2E2_6068	0.86	-1.1
6,890,595	-		Pf6N2E2_6068	0.86	-1.5
6,890,595	-		Pf6N2E2_6068	0.86	-2.2
6,890,595	-		Pf6N2E2_6068	0.86	-1.0
6,890,598	-		Pf6N2E2_6068	0.86	+0.0
6,890,598	-		Pf6N2E2_6068	0.86	-0.6
6,890,721	+				-0.2
6,890,721	+				+0.1
6,890,721	+				+1.3
6,890,722	-				-0.9
6,890,972	-		Pf6N2E2_6069	0.36	-0.7
6,890,972	-		Pf6N2E2_6069	0.36	-0.0
6,891,139	+		Pf6N2E2_6069	0.65	-1.4
6,891,139	+		Pf6N2E2_6069	0.65	-2.4
6,891,140	-		Pf6N2E2_6069	0.65	+0.5
6,891,280	+		Pf6N2E2_6069	0.90	-3.1
6,891,280	+		Pf6N2E2_6069	0.90	+0.4
6,891,280	+		Pf6N2E2_6069	0.90	-0.0
6,891,280	+		Pf6N2E2_6069	0.90	+0.2
6,891,280	+		Pf6N2E2_6069	0.90	-0.4
6,891,281	-				-0.4
6,891,281	-				+0.5
6,891,402	+		Pf6N2E2_6070	0.20	-0.6
6,891,402	+		Pf6N2E2_6070	0.20	+0.4
6,891,403	-		Pf6N2E2_6070	0.21	-0.4
6,891,403	-		Pf6N2E2_6070	0.21	-0.2
6,891,403	-		Pf6N2E2_6070	0.21	+0.1