Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_6058

Experiment: Nalidixic 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.004 mg/ml
6,876,834	-				-0.8
6,877,046	-		Pf6N2E2_6057	0.24	-0.7
6,877,066	+				-0.9
6,877,066	+		Pf6N2E2_6057	0.26	-2.6
6,877,067	-		Pf6N2E2_6057	0.26	-1.1
6,877,067	-		Pf6N2E2_6057	0.26	-1.7
6,877,067	-		Pf6N2E2_6057	0.26	-0.2
6,877,711	+				-0.6
6,877,711	+				-0.5
6,877,712	-				-2.2
6,877,712	-				-1.1
6,877,712	-				-1.2
6,877,712	-				-1.5
6,877,723	+				-0.9
6,877,723	+				-1.1
6,877,733	+				-1.8
6,877,926	+				-1.1
6,877,926	+				-0.6
6,877,927	-				-3.6
6,878,622	+		Pf6N2E2_6058	0.55	-1.3
6,878,623	-		Pf6N2E2_6058	0.55	-2.1
6,878,973	+		Pf6N2E2_6058	0.78	-2.4
6,878,998	-		Pf6N2E2_6058	0.80	-2.1
6,879,000	+		Pf6N2E2_6058	0.80	-0.3
6,879,001	-		Pf6N2E2_6058	0.80	-0.6
6,879,001	-		Pf6N2E2_6058	0.80	-1.9
6,879,001	-		Pf6N2E2_6058	0.80	-1.8
6,879,001	-		Pf6N2E2_6058	0.80	-2.0
6,879,117	+		Pf6N2E2_6058	0.88	-1.7
6,879,117	+		Pf6N2E2_6058	0.88	-3.1
6,879,118	-		Pf6N2E2_6058	0.88	-0.6
6,879,118	-		Pf6N2E2_6058	0.88	-1.6
6,879,118	-		Pf6N2E2_6058	0.88	-1.7
6,879,338	+				-1.8
6,879,338	+				-0.5
6,879,339	-				+0.4
6,879,386	+				-2.2
6,879,386	+				-1.6
6,879,390	+				-1.9
6,879,390	+				-1.6
6,879,390	+				-0.6
6,879,391	-		Pf6N2E2_6059	0.10	-1.2
6,879,391	-		Pf6N2E2_6059	0.10	-0.5
6,879,391	-		Pf6N2E2_6059	0.10	-0.0
6,879,391	-		Pf6N2E2_6059	0.10	-0.6
6,879,654	-		Pf6N2E2_6059	0.59	-0.1
6,879,779	+		Pf6N2E2_6059	0.82	-1.2
6,879,794	+		Pf6N2E2_6059	0.85	-2.1
6,879,795	-		Pf6N2E2_6059	0.85	-0.3
6,879,842	+				-2.0
6,879,842	+				+0.7
6,879,873	+				-1.8
6,879,873	+				-1.3
6,879,873	+				-0.2
6,879,873	+				-1.7
6,879,873	+				-0.6
6,879,874	-				+0.7
6,879,920	+				-0.8
6,879,920	+				+0.0
6,879,920	+				-1.3
6,879,950	+				-1.2
6,879,951	-				-0.2
6,879,952	+				-2.5
6,879,983	+				-3.0
6,879,984	-				+0.1
6,880,060	+				-0.1
6,880,229	-		Pf6N2E2_6060	0.11	-0.2
6,880,301	+		Pf6N2E2_6060	0.21	+0.2