Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5768

Experiment: Nalidixic 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.004 mg/ml
6,582,274	-				-2.4
6,582,415	+		Pf6N2E2_5767	0.21	-2.1
6,582,416	-		Pf6N2E2_5767	0.21	-0.1
6,582,416	-		Pf6N2E2_5767	0.21	+0.9
6,582,416	-		Pf6N2E2_5767	0.21	+1.6
6,582,416	-		Pf6N2E2_5767	0.21	+0.5
6,582,416	-		Pf6N2E2_5767	0.21	+0.2
6,582,456	+		Pf6N2E2_5767	0.25	+0.2
6,582,457	-		Pf6N2E2_5767	0.25	-0.9
6,582,596	+		Pf6N2E2_5767	0.40	+0.4
6,582,597	-		Pf6N2E2_5767	0.40	-1.2
6,582,597	-		Pf6N2E2_5767	0.40	-0.5
6,582,597	-		Pf6N2E2_5767	0.40	-0.3
6,582,597	-		Pf6N2E2_5767	0.40	+1.1
6,582,597	-		Pf6N2E2_5767	0.40	-0.5
6,582,659	-		Pf6N2E2_5767	0.46	+0.1
6,583,138	+				+0.4
6,583,138	+				-0.4
6,583,139	-				-0.6
6,583,189	+				-0.1
6,583,189	+				-0.4
6,583,190	-				-1.0
6,583,190	-				-0.5
6,583,190	-				-0.8
6,583,190	-				-2.3
6,583,190	-				+0.4
6,583,190	-				-0.9
6,583,190	-				+1.0
6,583,190	-				-0.0
6,583,192	+				-1.9
6,583,192	+				-0.7
6,583,192	+				+0.3
6,583,192	+				+0.7
6,583,193	-				-3.2
6,583,193	-				-0.5
6,583,193	-				-0.7
6,583,193	-				+0.4
6,583,193	-				+0.9
6,583,195	+				-0.8
6,583,196	-				+0.3
6,583,209	-				+0.8
6,583,211	+				-0.4
6,583,211	+				-0.4
6,583,211	+				+0.1
6,583,211	+				+1.0
6,583,211	+				-0.8
6,583,211	+				+0.1
6,583,211	+				-1.3
6,583,211	+				-0.3
6,583,212	-				+0.1
6,583,212	-				+0.1
6,583,212	-				+0.2
6,583,212	-				-0.7
6,583,212	-				+0.4
6,583,212	-				+0.2
6,583,212	-				+0.3
6,583,255	-				-0.3
6,583,258	+				-1.3
6,583,258	+				-2.9
6,583,259	-				+0.3
6,583,686	-		Pf6N2E2_5768	0.47	+0.8
6,583,874	-		Pf6N2E2_5768	0.67	-0.5
6,583,875	+		Pf6N2E2_5768	0.68	-0.2
6,583,875	+		Pf6N2E2_5768	0.68	-2.3
6,583,875	+		Pf6N2E2_5768	0.68	-2.0
6,583,876	-		Pf6N2E2_5768	0.68	+0.9
6,584,049	+		Pf6N2E2_5768	0.86	-1.6
6,584,049	+		Pf6N2E2_5768	0.86	-3.4
6,584,050	-		Pf6N2E2_5768	0.87	+0.3
6,584,050	-		Pf6N2E2_5768	0.87	-0.8
6,584,148	+				-2.0
6,584,149	-				-1.7
6,584,152	+				-0.3
6,584,152	+				-1.0
6,584,152	+				-3.0
6,584,153	-				-1.6
6,584,153	-				-0.4
6,584,153	-				-0.4
6,584,193	+				+0.6
6,584,194	-				-1.0
6,584,194	-				+0.5
6,584,194	-				+0.8
6,584,194	-				-0.5
6,584,209	-				-0.3
6,584,228	-				-1.5
6,584,243	+				+0.6
6,584,243	+				-2.2
6,584,367	+		Pf6N2E2_6162	0.45	+1.2
6,584,715	+		Pf6N2E2_6164	0.45	+0.6
6,584,883	+				+0.3
6,584,883	+				-1.7
6,584,883	+				-0.5
6,584,883	+				-1.4
6,584,942	+				-1.0
6,584,942	+				-0.2
6,584,943	-				-1.3
6,584,987	+				-2.2
6,584,987	+				+0.9
6,584,987	+				-1.2
6,584,987	+				-0.0
6,584,988	-				+0.1
6,584,988	-				+0.3
6,584,988	-				-0.1
6,584,988	-				+0.3
6,584,988	-				-1.9
6,584,988	-				-1.1
6,584,988	-				-1.0
6,584,988	-				+1.0
6,584,998	-				-0.2
6,584,998	-				+0.3
6,585,165	+		Pf6N2E2_5769	0.20	-0.3