Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5623

Experiment: Nalidixic 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.004 mg/ml
6,438,923	-		Pf6N2E2_5621	0.48	+0.3
6,438,977	+		Pf6N2E2_5621	0.56	-0.3
6,438,978	-		Pf6N2E2_5621	0.56	-0.6
6,439,124	-		Pf6N2E2_5621	0.78	+0.2
6,439,253	-				+0.6
6,439,253	-				+0.3
6,439,259	-				+0.3
6,439,259	-				+1.4
6,439,306	+				-0.6
6,439,306	+				+0.3
6,439,306	+				+0.0
6,439,306	+				+0.6
6,439,306	+				-0.2
6,439,327	+		Pf6N2E2_5622	0.11	-0.0
6,439,327	+		Pf6N2E2_5622	0.11	-0.6
6,439,347	-		Pf6N2E2_5622	0.16	+0.2
6,439,665	-				-0.1
6,439,665	-				-0.9
6,439,717	+				-0.1
6,439,718	-				+0.3
6,439,718	-				+1.1
6,439,718	-				-0.6
6,439,800	-				-0.4
6,439,841	+		Pf6N2E2_5623	0.14	-0.2
6,439,841	+		Pf6N2E2_5623	0.14	-0.3
6,439,842	-		Pf6N2E2_5623	0.15	-0.9
6,439,987	+		Pf6N2E2_5623	0.63	-1.6
6,440,090	+				-0.0
6,440,090	+				-1.0
6,440,120	-				-4.5
6,440,727	-				-1.8
6,440,729	+				-1.3
6,440,729	+				-1.4
6,440,730	-				+0.7
6,440,730	-				-0.7
6,440,772	-				-0.7
6,440,806	+				-2.7
6,440,806	+				-3.5
6,440,807	-				-0.2
6,440,980	+		Pf6N2E2_5625	0.23	-0.1