Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5312

Experiment: Nalidixic 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.004 mg/ml
6,105,318	-				+0.8
6,105,333	+				+0.7
6,105,333	+				-2.3
6,105,334	-				-0.2
6,105,334	-				+1.7
6,105,334	-				+0.2
6,105,385	-				+1.1
6,105,422	+				+1.6
6,105,423	-				-1.5
6,105,491	+				-1.0
6,105,491	+				+0.3
6,105,491	+				-0.1
6,105,653	+		Pf6N2E2_5311	0.28	+1.1
6,105,653	+		Pf6N2E2_5311	0.28	-0.4
6,105,653	+		Pf6N2E2_5311	0.28	+0.0
6,105,654	-		Pf6N2E2_5311	0.29	+2.3
6,105,654	-		Pf6N2E2_5311	0.29	-1.2
6,105,654	-		Pf6N2E2_5311	0.29	+0.3
6,105,802	+		Pf6N2E2_5311	0.51	+0.4
6,105,802	+		Pf6N2E2_5311	0.51	+0.1
6,105,802	+		Pf6N2E2_5311	0.51	-0.8
6,105,802	+		Pf6N2E2_5311	0.51	+0.7
6,105,802	+		Pf6N2E2_5311	0.51	+0.9
6,105,803	-		Pf6N2E2_5311	0.51	-1.0
6,105,803	-		Pf6N2E2_5311	0.51	+0.1
6,105,803	-		Pf6N2E2_5311	0.51	+0.5
6,105,890	+		Pf6N2E2_5311	0.64	+0.1
6,105,890	+		Pf6N2E2_5311	0.64	+0.8
6,105,891	-		Pf6N2E2_5311	0.64	-1.6
6,105,891	-		Pf6N2E2_5311	0.64	-0.7
6,105,891	-		Pf6N2E2_5311	0.64	-0.3
6,105,891	-		Pf6N2E2_5311	0.64	+0.2
6,105,920	+		Pf6N2E2_5311	0.68	-0.5
6,105,920	+		Pf6N2E2_5311	0.68	-0.3
6,105,920	+		Pf6N2E2_5311	0.68	-0.1
6,105,920	+		Pf6N2E2_5311	0.68	+0.4
6,105,921	-		Pf6N2E2_5311	0.68	-3.2
6,105,921	-		Pf6N2E2_5311	0.68	-0.7
6,105,969	+		Pf6N2E2_5311	0.76	-0.3
6,105,970	-		Pf6N2E2_5311	0.76	+0.1
6,105,971	+		Pf6N2E2_5311	0.76	-0.2
6,105,971	+		Pf6N2E2_5311	0.76	-0.4
6,105,971	+		Pf6N2E2_5311	0.76	-1.6
6,105,971	+		Pf6N2E2_5311	0.76	-0.7
6,105,971	+		Pf6N2E2_5311	0.76	-1.0
6,105,971	+		Pf6N2E2_5311	0.76	-0.3
6,105,971	+		Pf6N2E2_5311	0.76	-0.8
6,105,971	+		Pf6N2E2_5311	0.76	-0.1
6,105,972	-		Pf6N2E2_5311	0.76	+1.2
6,105,972	-		Pf6N2E2_5311	0.76	-1.2
6,105,972	-		Pf6N2E2_5311	0.76	+1.2
6,106,190	-				+0.1
6,106,190	-				+1.2
6,106,230	+				+1.3
6,106,231	-				-1.4
6,106,231	-				-0.3
6,106,231	-				-0.1
6,106,282	+				+0.3
6,106,282	+				-1.0
6,106,282	+				-0.2
6,106,411	-		Pf6N2E2_5312	0.36	-1.2
6,106,534	-		Pf6N2E2_5312	0.73	-0.9
6,106,658	+				+0.8
6,106,658	+				-0.3
6,106,659	-				+0.7
6,106,659	-				+0.7
6,106,659	-				-1.2
6,106,659	-				-0.6
6,106,759	+				-1.5
6,106,760	-				-2.5
6,106,760	-				-1.9
6,106,867	+		Pf6N2E2_5313	0.17	+0.2
6,106,867	+		Pf6N2E2_5313	0.17	-1.0
6,106,867	+		Pf6N2E2_5313	0.17	-0.6
6,106,867	+		Pf6N2E2_5313	0.17	-0.4
6,106,867	+		Pf6N2E2_5313	0.17	-0.5
6,106,867	+		Pf6N2E2_5313	0.17	-0.5
6,106,868	-		Pf6N2E2_5313	0.17	-0.1
6,106,868	-		Pf6N2E2_5313	0.17	-0.1
6,106,868	-		Pf6N2E2_5313	0.17	+1.2
6,106,868	-		Pf6N2E2_5313	0.17	-0.3
6,106,868	-		Pf6N2E2_5313	0.17	-0.8
6,107,058	+		Pf6N2E2_5313	0.38	-4.1
6,107,570	+				+0.0
6,107,571	-				-0.3
6,107,618	+				-0.4
6,107,618	+				+1.2