Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4650

Experiment: Nalidixic 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.004 mg/ml
5,378,219	+				-0.4
5,378,578	+		Pf6N2E2_4648	0.80	+1.1
5,378,578	+		Pf6N2E2_4648	0.80	+0.1
5,378,578	+		Pf6N2E2_4648	0.80	+0.5
5,378,579	-		Pf6N2E2_4648	0.81	+0.2
5,378,579	-		Pf6N2E2_4648	0.81	+0.5
5,378,579	-		Pf6N2E2_4648	0.81	+0.2
5,378,590	+		Pf6N2E2_4648	0.83	-0.7
5,378,590	+		Pf6N2E2_4648	0.83	+0.4
5,378,591	-		Pf6N2E2_4648	0.83	-0.9
5,378,591	-		Pf6N2E2_4648	0.83	+2.1
5,378,591	-		Pf6N2E2_4648	0.83	-1.2
5,378,591	-		Pf6N2E2_4648	0.83	-0.9
5,378,591	-		Pf6N2E2_4648	0.83	+0.5
5,378,640	+				-0.6
5,378,640	+				-0.6
5,378,641	-				+0.2
5,378,641	-				+0.5
5,378,725	+				+0.5
5,378,725	+				-0.9
5,378,726	-				-0.5
5,379,084	+				-0.5
5,379,084	+				-1.0
5,379,084	+				-1.3
5,379,084	+				-0.5
5,379,084	+				+0.5
5,379,084	+				-1.0
5,379,084	+				-0.2
5,379,085	-				-0.5
5,379,085	-				-0.3
5,379,085	-				-0.8
5,379,085	-				-0.6
5,379,119	+				-0.1
5,379,119	+				-1.0
5,379,120	-				-0.0
5,379,120	-				-1.5
5,379,152	-				-0.9
5,379,237	+				-0.5
5,379,237	+				-0.4
5,379,237	+				+0.8
5,379,238	-				-0.5
5,379,238	-				-3.0
5,379,238	-				+0.1
5,379,238	-				+0.0
5,379,238	-				+0.7
5,379,238	-				-1.2
5,379,240	+				+0.8
5,379,240	+				+1.2
5,379,240	+				-1.1
5,379,240	+				+0.7
5,379,240	+				-0.4
5,379,240	+				-1.5
5,379,240	+				-1.1
5,379,240	+				+0.1
5,379,240	+				-0.1
5,379,240	+				-0.8
5,379,241	-				+0.2
5,379,241	-				-0.0
5,379,241	-				+1.3
5,379,241	-				+0.6
5,379,241	-				-2.8
5,379,241	-				+0.1
5,379,241	-				-0.0
5,379,258	+				-0.3
5,379,259	-				-0.2
5,379,494	+		Pf6N2E2_4650	0.17	+0.0
5,379,494	+		Pf6N2E2_4650	0.17	-1.3
5,379,495	-		Pf6N2E2_4650	0.17	-1.2
5,379,498	-		Pf6N2E2_4650	0.17	-0.1
5,379,498	-		Pf6N2E2_4650	0.17	+0.6
5,379,498	-		Pf6N2E2_4650	0.17	-1.3
5,379,962	-		Pf6N2E2_4650	0.45	+0.3
5,379,962	-		Pf6N2E2_4650	0.45	-0.1
5,379,967	+		Pf6N2E2_4650	0.45	-0.6
5,379,968	-		Pf6N2E2_4650	0.45	+0.5
5,379,968	-		Pf6N2E2_4650	0.45	-0.1
5,379,968	-		Pf6N2E2_4650	0.45	-0.2
5,380,132	+		Pf6N2E2_4650	0.55	-0.7
5,380,132	+		Pf6N2E2_4650	0.55	-1.6
5,380,132	+		Pf6N2E2_4650	0.55	-0.1
5,380,133	-		Pf6N2E2_4650	0.55	+1.0
5,380,133	-		Pf6N2E2_4650	0.55	+0.3
5,380,340	-		Pf6N2E2_4650	0.68	+0.6
5,380,340	-		Pf6N2E2_4650	0.68	-1.2
5,380,340	-		Pf6N2E2_4650	0.68	-0.2
5,380,340	-		Pf6N2E2_4650	0.68	+0.2
5,380,340	-		Pf6N2E2_4650	0.68	+0.2
5,380,340	-		Pf6N2E2_4650	0.68	-0.2
5,380,340	-		Pf6N2E2_4650	0.68	-2.7
5,380,608	+		Pf6N2E2_4650	0.84	+1.6
5,380,609	-		Pf6N2E2_4650	0.84	+0.8
5,380,699	+		Pf6N2E2_4650	0.89	-0.7
5,380,699	+		Pf6N2E2_4650	0.89	-0.0
5,380,699	+		Pf6N2E2_4650	0.89	+0.0
5,380,699	+		Pf6N2E2_4650	0.89	+0.4
5,380,699	+		Pf6N2E2_4650	0.89	+0.5
5,380,700	-		Pf6N2E2_4650	0.89	-0.2
5,380,700	-		Pf6N2E2_4650	0.89	-1.6
5,380,700	-		Pf6N2E2_4650	0.89	+0.6
5,380,700	-		Pf6N2E2_4650	0.89	-0.3
5,380,700	-		Pf6N2E2_4650	0.89	+0.1
5,380,700	-		Pf6N2E2_4650	0.89	-2.3
5,380,700	-		Pf6N2E2_4650	0.89	+0.2
5,380,700	-		Pf6N2E2_4650	0.89	+0.6
5,380,700	-		Pf6N2E2_4650	0.89	-1.0
5,380,700	-		Pf6N2E2_4650	0.89	-0.5
5,380,700	-		Pf6N2E2_4650	0.89	-0.5
5,380,738	+				-0.7
5,380,738	+				+0.9
5,380,738	+				-0.2
5,380,738	+				-0.4
5,380,738	+				-0.0
5,380,738	+				-1.4
5,380,738	+				+0.0
5,380,738	+				-1.7
5,380,739	-				+0.4
5,380,867	+				-0.0
5,380,867	+				-1.3
5,380,868	-				+0.8
5,380,868	-				-0.6
5,380,868	-				-0.2
5,380,907	+				-0.3
5,380,908	-				+0.8
5,381,342	+		Pf6N2E2_4651	0.41	-0.1
5,381,342	+		Pf6N2E2_4651	0.41	+0.9
5,381,343	-		Pf6N2E2_4651	0.41	-0.3
5,381,343	-		Pf6N2E2_4651	0.41	-0.2
5,381,343	-		Pf6N2E2_4651	0.41	-0.6
5,381,343	-		Pf6N2E2_4651	0.41	-0.5
5,381,343	-		Pf6N2E2_4651	0.41	-1.1
5,381,499	+		Pf6N2E2_4651	0.66	-0.1
5,381,499	+		Pf6N2E2_4651	0.66	-0.8
5,381,582	+		Pf6N2E2_4651	0.79	+0.7
5,381,582	+		Pf6N2E2_4651	0.79	+0.6
5,381,582	+		Pf6N2E2_4651	0.79	-0.2
5,381,582	+		Pf6N2E2_4651	0.79	-1.5
5,381,582	+		Pf6N2E2_4651	0.79	-0.1
5,381,583	-		Pf6N2E2_4651	0.79	-0.1
5,381,583	-		Pf6N2E2_4651	0.79	-0.3
5,381,583	-		Pf6N2E2_4651	0.79	+0.4
5,381,583	-		Pf6N2E2_4651	0.79	+0.8
5,381,583	-		Pf6N2E2_4651	0.79	-0.0
5,381,583	-		Pf6N2E2_4651	0.79	+1.2
5,381,583	-		Pf6N2E2_4651	0.79	+0.6
5,381,588	+		Pf6N2E2_4651	0.80	+1.4
5,381,588	+		Pf6N2E2_4651	0.80	+0.1
5,381,588	+		Pf6N2E2_4651	0.80	+0.7
5,381,588	+		Pf6N2E2_4651	0.80	-0.9
5,381,588	+		Pf6N2E2_4651	0.80	+0.5
5,381,588	+		Pf6N2E2_4651	0.80	-1.4
5,381,588	+		Pf6N2E2_4651	0.80	-0.1
5,381,588	+		Pf6N2E2_4651	0.80	-0.3
5,381,588	+		Pf6N2E2_4651	0.80	-0.3
5,381,588	+		Pf6N2E2_4651	0.80	+0.8
5,381,588	+		Pf6N2E2_4651	0.80	+0.4
5,381,589	-		Pf6N2E2_4651	0.80	-0.5
5,381,589	-		Pf6N2E2_4651	0.80	+0.4
5,381,589	-		Pf6N2E2_4651	0.80	+0.0
5,381,589	-		Pf6N2E2_4651	0.80	-0.5
5,381,589	-		Pf6N2E2_4651	0.80	-0.5
5,381,589	-		Pf6N2E2_4651	0.80	-0.6
5,381,589	-		Pf6N2E2_4651	0.80	-0.8
5,381,589	-		Pf6N2E2_4651	0.80	+0.2
5,381,589	-		Pf6N2E2_4651	0.80	+0.0
5,381,589	-		Pf6N2E2_4651	0.80	+0.2
5,381,600	+		Pf6N2E2_4651	0.82	+1.0
5,381,601	-		Pf6N2E2_4651	0.82	-0.5
5,381,601	-		Pf6N2E2_4651	0.82	-1.6
5,381,708	+				+0.2
5,381,708	+				-2.9
5,381,708	+				-1.2
5,381,708	+				-0.3
5,381,708	+				+0.9
5,381,708	+				+0.3
5,381,708	+				+1.0
5,381,709	-				+0.8
5,381,709	-				+0.1
5,381,774	+				-1.7
5,381,774	+				-0.7
5,381,774	+				+0.1
5,381,774	+				-0.6
5,381,774	+				+0.6
5,381,794	+				+0.4
5,381,794	+				+0.0
5,381,861	-				-0.8