Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4531
Experiment: Nalidixic 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Nalidixic 0.004 mg/ml |
---|---|---|---|---|---|
remove | |||||
5,265,587 | - | Pf6N2E2_4530 | 0.83 | -0.8 | |
5,265,587 | - | Pf6N2E2_4530 | 0.83 | -1.6 | |
5,265,587 | - | Pf6N2E2_4530 | 0.83 | -0.4 | |
5,265,981 | + | -0.2 | |||
5,266,053 | - | -0.1 | |||
5,266,053 | - | +0.7 | |||
5,266,206 | - | Pf6N2E2_4531 | 0.12 | -0.9 | |
5,266,977 | - | +0.2 | |||
5,266,977 | - | +0.1 | |||
5,267,513 | + | Pf6N2E2_4532 | 0.38 | -0.8 | |
5,267,514 | - | Pf6N2E2_4532 | 0.38 | -0.2 | |
5,267,885 | - | Pf6N2E2_4532 | 0.66 | +0.2 | |
5,267,950 | + | Pf6N2E2_4532 | 0.70 | +0.3 | |
5,267,951 | - | Pf6N2E2_4532 | 0.70 | -0.2 | |
5,267,951 | - | Pf6N2E2_4532 | 0.70 | -0.2 | |
5,267,952 | + | Pf6N2E2_4532 | 0.71 | +1.1 | |
5,267,953 | - | Pf6N2E2_4532 | 0.71 | +0.0 | |
5,267,953 | - | Pf6N2E2_4532 | 0.71 | +0.1 | |
5,267,953 | - | Pf6N2E2_4532 | 0.71 | -1.6 | |
5,267,953 | - | Pf6N2E2_4532 | 0.71 | -2.8 |
Or see this region's nucleotide sequence