Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3436

Experiment: Nalidixic 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.004 mg/ml
3,999,326	+		Pf6N2E2_3435	0.83	-0.2
3,999,327	-		Pf6N2E2_3435	0.83	+0.1
3,999,350	-		Pf6N2E2_3435	0.83	+0.4
3,999,365	+		Pf6N2E2_3435	0.83	-2.4
3,999,399	-		Pf6N2E2_3435	0.84	-0.5
3,999,458	+		Pf6N2E2_3435	0.86	+1.3
3,999,515	+		Pf6N2E2_3435	0.87	-0.1
3,999,515	+		Pf6N2E2_3435	0.87	+0.1
3,999,515	+		Pf6N2E2_3435	0.87	+0.2
3,999,576	-		Pf6N2E2_3435	0.88	-0.4
3,999,576	-		Pf6N2E2_3435	0.88	+0.2
3,999,576	-		Pf6N2E2_3435	0.88	-0.3
3,999,661	+		Pf6N2E2_3435	0.90	-0.0
3,999,746	+				+0.1
3,999,747	-				-1.3
3,999,764	+				+0.5
3,999,765	-				-0.7
4,000,091	+				+0.8
4,000,234	+				+0.2
4,000,388	-				+0.0
4,000,388	-				+1.4
4,000,388	-				-1.4
4,000,389	+				-1.2
4,000,484	-				-0.2
4,000,510	+				+1.5
4,000,510	+				-0.6
4,000,525	+				-1.2
4,000,564	+				-0.4
4,000,564	+				+0.4
4,000,604	+		Pf6N2E2_3436	0.11	+0.2
4,000,604	+		Pf6N2E2_3436	0.11	-2.9
4,000,604	+		Pf6N2E2_3436	0.11	-2.8
4,000,605	-		Pf6N2E2_3436	0.11	+0.1
4,000,605	-		Pf6N2E2_3436	0.11	-1.8
4,000,605	-		Pf6N2E2_3436	0.11	+0.3
4,000,631	+		Pf6N2E2_3436	0.11	-0.6
4,000,744	+		Pf6N2E2_3436	0.14	-1.1
4,000,745	-		Pf6N2E2_3436	0.14	-0.4
4,000,789	+		Pf6N2E2_3436	0.15	-0.6
4,000,819	+		Pf6N2E2_3436	0.16	+2.0
4,000,900	+		Pf6N2E2_3436	0.17	+0.0
4,000,900	+		Pf6N2E2_3436	0.17	-0.1
4,000,918	+		Pf6N2E2_3436	0.18	-0.5
4,000,918	+		Pf6N2E2_3436	0.18	-1.4
4,000,918	+		Pf6N2E2_3436	0.18	-0.5
4,000,918	+		Pf6N2E2_3436	0.18	-0.5
4,000,918	+		Pf6N2E2_3436	0.18	-0.3
4,000,918	+		Pf6N2E2_3436	0.18	+0.6
4,000,918	+		Pf6N2E2_3436	0.18	-1.6
4,001,009	+		Pf6N2E2_3436	0.20	-0.1
4,001,010	-		Pf6N2E2_3436	0.20	-0.3
4,001,013	-		Pf6N2E2_3436	0.20	-0.4
4,001,013	-		Pf6N2E2_3436	0.20	-1.3
4,001,013	-		Pf6N2E2_3436	0.20	+0.3
4,001,304	-		Pf6N2E2_3436	0.26	-0.4
4,001,329	+		Pf6N2E2_3436	0.27	-0.0
4,001,329	+		Pf6N2E2_3436	0.27	+0.1
4,001,329	+		Pf6N2E2_3436	0.27	-0.1
4,001,330	-		Pf6N2E2_3436	0.27	-1.9
4,001,332	+		Pf6N2E2_3436	0.27	-0.5
4,001,659	+		Pf6N2E2_3436	0.34	-0.6
4,001,702	+		Pf6N2E2_3436	0.35	+0.7
4,001,805	-		Pf6N2E2_3436	0.38	-1.0
4,001,897	-		Pf6N2E2_3436	0.40	+0.1
4,001,965	+		Pf6N2E2_3436	0.41	+0.6
4,001,965	+		Pf6N2E2_3436	0.41	-0.7
4,001,966	-		Pf6N2E2_3436	0.41	-0.2
4,002,059	-		Pf6N2E2_3436	0.43	-0.2
4,002,059	-		Pf6N2E2_3436	0.43	-0.2
4,002,059	-		Pf6N2E2_3436	0.43	+0.3
4,002,182	-		Pf6N2E2_3436	0.46	-0.5
4,002,185	+		Pf6N2E2_3436	0.46	+0.4
4,002,186	-		Pf6N2E2_3436	0.46	+0.9
4,002,207	+		Pf6N2E2_3436	0.47	+1.2
4,002,207	+		Pf6N2E2_3436	0.47	+0.8
4,002,208	-		Pf6N2E2_3436	0.47	-0.8
4,002,226	-		Pf6N2E2_3436	0.47	+0.5
4,002,388	+		Pf6N2E2_3436	0.51	-0.1
4,002,389	-		Pf6N2E2_3436	0.51	-0.2
4,002,400	+		Pf6N2E2_3436	0.51	+0.3
4,002,403	+		Pf6N2E2_3436	0.51	-0.8
4,002,404	-		Pf6N2E2_3436	0.51	+0.6
4,002,404	-		Pf6N2E2_3436	0.51	-1.8
4,002,616	+		Pf6N2E2_3436	0.56	+0.2
4,002,617	-		Pf6N2E2_3436	0.56	+0.8
4,002,704	+		Pf6N2E2_3436	0.58	-0.1
4,002,705	-		Pf6N2E2_3436	0.58	+1.0
4,002,705	-		Pf6N2E2_3436	0.58	-1.5
4,002,720	-		Pf6N2E2_3436	0.58	-1.4
4,002,757	+		Pf6N2E2_3436	0.59	+0.0
4,002,859	+		Pf6N2E2_3436	0.61	-1.1
4,002,865	+		Pf6N2E2_3436	0.61	-0.9
4,002,866	-		Pf6N2E2_3436	0.61	-2.3
4,002,866	-		Pf6N2E2_3436	0.61	-0.0
4,002,916	+		Pf6N2E2_3436	0.62	-0.8
4,002,916	+		Pf6N2E2_3436	0.62	+0.9
4,002,917	-		Pf6N2E2_3436	0.62	+1.2
4,002,917	-		Pf6N2E2_3436	0.62	-0.4
4,002,948	-		Pf6N2E2_3436	0.63	+0.9
4,002,984	+		Pf6N2E2_3436	0.64	-0.1
4,003,057	+		Pf6N2E2_3436	0.65	-1.2
4,003,058	-		Pf6N2E2_3436	0.65	-0.4
4,003,081	+		Pf6N2E2_3436	0.66	+0.5
4,003,081	+		Pf6N2E2_3436	0.66	-0.9
4,003,082	-		Pf6N2E2_3436	0.66	-2.1
4,003,201	+		Pf6N2E2_3436	0.69	-1.5
4,003,201	+		Pf6N2E2_3436	0.69	-0.6
4,003,201	+		Pf6N2E2_3436	0.69	-0.1
4,003,202	-		Pf6N2E2_3436	0.69	-0.6
4,003,202	-		Pf6N2E2_3436	0.69	-0.3
4,003,202	-		Pf6N2E2_3436	0.69	+0.4
4,003,279	+		Pf6N2E2_3436	0.70	-0.2
4,003,279	+		Pf6N2E2_3436	0.70	+0.5
4,003,280	-		Pf6N2E2_3436	0.70	-0.2
4,003,523	-		Pf6N2E2_3436	0.76	-1.1
4,003,523	-		Pf6N2E2_3436	0.76	-0.3
4,003,523	-		Pf6N2E2_3436	0.76	+0.7
4,003,523	-		Pf6N2E2_3436	0.76	-1.0
4,003,543	+		Pf6N2E2_3436	0.76	-0.7
4,003,606	+		Pf6N2E2_3436	0.78	+0.8
4,003,606	+		Pf6N2E2_3436	0.78	+0.3
4,003,606	+		Pf6N2E2_3436	0.78	+0.3
4,003,607	-		Pf6N2E2_3436	0.78	-0.7
4,003,607	-		Pf6N2E2_3436	0.78	-0.6
4,003,607	-		Pf6N2E2_3436	0.78	+0.7
4,003,664	-		Pf6N2E2_3436	0.79	+0.5
4,003,748	+		Pf6N2E2_3436	0.81	-0.6
4,003,748	+		Pf6N2E2_3436	0.81	+0.4
4,003,748	+		Pf6N2E2_3436	0.81	+0.5
4,003,749	-		Pf6N2E2_3436	0.81	-1.1
4,003,749	-		Pf6N2E2_3436	0.81	+0.0
4,003,766	-		Pf6N2E2_3436	0.81	+0.3
4,003,784	+		Pf6N2E2_3436	0.82	-1.5
4,003,784	+		Pf6N2E2_3436	0.82	-0.1
4,003,784	+		Pf6N2E2_3436	0.82	+0.2
4,003,785	-		Pf6N2E2_3436	0.82	-1.0
4,003,785	-		Pf6N2E2_3436	0.82	-1.0
4,003,894	+		Pf6N2E2_3436	0.84	-0.4
4,003,894	+		Pf6N2E2_3436	0.84	-0.6
4,003,894	+		Pf6N2E2_3436	0.84	-0.6
4,003,894	+		Pf6N2E2_3436	0.84	+1.1
4,003,895	-		Pf6N2E2_3436	0.84	-0.9
4,003,895	-		Pf6N2E2_3436	0.84	+0.3
4,003,895	-		Pf6N2E2_3436	0.84	+0.6
4,004,001	+		Pf6N2E2_3436	0.86	-1.6
4,004,001	+		Pf6N2E2_3436	0.86	+0.3
4,004,002	-		Pf6N2E2_3436	0.86	-1.0
4,004,234	-				+0.0
4,004,329	+				-2.5
4,004,329	+				-0.1
4,004,330	-				-0.9
4,004,359	+				+0.2
4,004,369	-				-0.2
4,004,389	+				-1.1
4,004,389	+				-0.7
4,004,389	+				+0.4
4,004,440	+				-1.0
4,004,441	-				+0.1
4,004,441	-				-0.7
4,004,441	-				+0.7
4,004,498	-				+1.0
4,004,498	-				+1.0
4,004,498	-				-0.6
4,004,498	-				-0.3
4,004,498	-				-0.4
4,004,528	-				+1.1
4,004,528	-				+0.2
4,004,682	+				+0.0
4,004,818	-				-0.3
4,005,249	+		Pf6N2E2_3437	0.23	+0.0
4,005,352	+		Pf6N2E2_3437	0.27	-0.5
4,005,353	-		Pf6N2E2_3437	0.27	+0.5
4,005,362	+		Pf6N2E2_3437	0.27	-0.2
4,005,396	+		Pf6N2E2_3437	0.28	+0.3