Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3337

Experiment: Nalidixic 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.004 mg/ml
3,859,735	+		Pf6N2E2_3336	0.57	-2.5
3,859,736	-		Pf6N2E2_3336	0.57	-0.2
3,859,742	-		Pf6N2E2_3336	0.57	-0.1
3,859,858	+		Pf6N2E2_3336	0.65	-1.0
3,859,858	+		Pf6N2E2_3336	0.65	-0.6
3,859,858	+		Pf6N2E2_3336	0.65	+0.1
3,859,859	-		Pf6N2E2_3336	0.65	-0.1
3,859,859	-		Pf6N2E2_3336	0.65	-0.5
3,859,859	-		Pf6N2E2_3336	0.65	-1.7
3,859,915	+		Pf6N2E2_3336	0.68	-0.0
3,859,915	+		Pf6N2E2_3336	0.68	-0.9
3,859,916	-		Pf6N2E2_3336	0.68	+0.3
3,859,916	-		Pf6N2E2_3336	0.68	-0.0
3,859,916	-		Pf6N2E2_3336	0.68	-0.2
3,859,916	-		Pf6N2E2_3336	0.68	+0.6
3,860,246	+		Pf6N2E2_3336	0.90	+0.1
3,860,246	+		Pf6N2E2_3336	0.90	-0.8
3,860,246	+		Pf6N2E2_3336	0.90	-0.8
3,860,246	+		Pf6N2E2_3336	0.90	+0.6
3,860,430	+				+0.8
3,860,430	+				-0.8
3,860,431	-				-1.1
3,860,431	-				-0.1
3,860,431	-				-0.4
3,860,489	+				-0.8
3,860,490	-				-0.8
3,860,490	-				+0.1
3,860,490	-				-0.3
3,860,490	-				+0.5
3,860,610	+				-0.0
3,860,683	+				+0.6
3,860,683	+				+0.5
3,860,684	-				-2.1
3,860,684	-				+0.6
3,860,747	+				-0.5
3,860,820	+				-0.0
3,860,820	+				-0.2
3,860,821	-				-1.9
3,860,821	-				-1.1
3,860,821	-				-1.2
3,860,821	-				-0.8
3,860,821	-				-3.7
3,860,901	+		Pf6N2E2_3337	0.11	-1.1
3,861,321	+		Pf6N2E2_3337	0.35	-1.0
3,861,321	+		Pf6N2E2_3337	0.35	-0.7
3,861,321	+		Pf6N2E2_3337	0.35	-0.3
3,861,321	+		Pf6N2E2_3337	0.35	-1.7
3,861,321	+		Pf6N2E2_3337	0.35	-0.9
3,861,322	-		Pf6N2E2_3337	0.35	-2.8
3,861,322	-		Pf6N2E2_3337	0.35	-0.4
3,861,322	-		Pf6N2E2_3337	0.35	-1.8
3,861,322	-		Pf6N2E2_3337	0.35	-0.5
3,861,322	-		Pf6N2E2_3337	0.35	-0.1
3,861,546	+		Pf6N2E2_3337	0.48	-2.8
3,861,546	+		Pf6N2E2_3337	0.48	-1.2
3,861,555	+		Pf6N2E2_3337	0.48	-1.6
3,861,555	+		Pf6N2E2_3337	0.48	-0.6
3,861,556	-		Pf6N2E2_3337	0.49	-0.2
3,861,738	+		Pf6N2E2_3337	0.59	-0.7
3,861,738	+		Pf6N2E2_3337	0.59	-2.2
3,861,739	-		Pf6N2E2_3337	0.59	-2.0
3,861,868	-		Pf6N2E2_3337	0.67	-0.9
3,862,451	+				-0.0
3,862,452	-				-1.1
3,862,474	+				-1.7
3,862,474	+				-0.1
3,862,474	+				+0.1
3,862,474	+				-1.0
3,862,474	+				-1.3
3,862,474	+				+0.1
3,862,474	+				-0.1
3,862,474	+				+1.0
3,862,475	-				-0.1
3,862,475	-				-0.2
3,862,475	-				-0.9
3,862,475	-				+0.1
3,862,475	-				-0.0
3,862,475	-				-1.1
3,862,475	-				+1.0
3,862,475	-				-0.4
3,862,475	-				-0.4
3,863,168	+		Pf6N2E2_3338	0.74	+1.7
3,863,168	+		Pf6N2E2_3338	0.74	+2.1
3,863,168	+		Pf6N2E2_3338	0.74	+0.1
3,863,415	+				+1.5
3,863,429	+				-3.1
3,863,430	-				+0.5