Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2942

Experiment: Nalidixic 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.004 mg/ml
3,433,542	+		Pf6N2E2_2941	0.58	+0.9
3,433,543	-		Pf6N2E2_2941	0.58	+0.6
3,433,557	+		Pf6N2E2_2941	0.59	+1.1
3,433,558	-		Pf6N2E2_2941	0.59	+0.1
3,433,629	+		Pf6N2E2_2941	0.66	+0.7
3,433,629	+		Pf6N2E2_2941	0.66	-0.6
3,433,629	+		Pf6N2E2_2941	0.66	-0.1
3,433,629	+		Pf6N2E2_2941	0.66	+0.8
3,434,004	+				+0.1
3,434,004	+				+0.2
3,434,573	-		Pf6N2E2_2942	0.13	+2.2
3,435,010	+		Pf6N2E2_2942	0.33	+1.1
3,435,176	+		Pf6N2E2_2942	0.41	+1.9
3,435,176	+		Pf6N2E2_2942	0.41	+2.2
3,435,177	-		Pf6N2E2_2942	0.41	-0.6
3,435,215	-		Pf6N2E2_2942	0.43	+2.0
3,435,610	+		Pf6N2E2_2942	0.61	-0.3
3,435,610	+		Pf6N2E2_2942	0.61	+1.5
3,435,611	-		Pf6N2E2_2942	0.61	+1.1
3,435,611	-		Pf6N2E2_2942	0.61	+1.6
3,435,611	-		Pf6N2E2_2942	0.61	+2.2
3,435,667	+		Pf6N2E2_2942	0.64	+2.8
3,435,667	+		Pf6N2E2_2942	0.64	+2.2
3,435,667	+		Pf6N2E2_2942	0.64	+2.7
3,435,667	+		Pf6N2E2_2942	0.64	+0.5
3,435,667	+		Pf6N2E2_2942	0.64	+1.7
3,435,667	+		Pf6N2E2_2942	0.64	+1.6
3,435,667	+		Pf6N2E2_2942	0.64	+1.1
3,435,667	+		Pf6N2E2_2942	0.64	+1.7
3,435,667	+		Pf6N2E2_2942	0.64	+1.5
3,435,667	+		Pf6N2E2_2942	0.64	+2.1
3,435,668	-		Pf6N2E2_2942	0.64	+1.2
3,435,668	-		Pf6N2E2_2942	0.64	+0.9
3,435,668	-		Pf6N2E2_2942	0.64	+2.7
3,435,668	-		Pf6N2E2_2942	0.64	+1.6
3,435,668	-		Pf6N2E2_2942	0.64	+2.4
3,435,668	-		Pf6N2E2_2942	0.64	+2.5
3,435,784	+		Pf6N2E2_2942	0.69	+1.5
3,435,784	+		Pf6N2E2_2942	0.69	+1.5
3,435,784	+		Pf6N2E2_2942	0.69	+1.7
3,435,784	+		Pf6N2E2_2942	0.69	+1.1
3,435,784	+		Pf6N2E2_2942	0.69	+1.9
3,435,785	-		Pf6N2E2_2942	0.69	+2.5
3,435,785	-		Pf6N2E2_2942	0.69	+1.8
3,435,785	-		Pf6N2E2_2942	0.69	+1.8
3,435,833	+		Pf6N2E2_2942	0.72	+2.5
3,435,908	+		Pf6N2E2_2942	0.75	+2.1
3,435,909	-		Pf6N2E2_2942	0.75	+1.2
3,435,909	-		Pf6N2E2_2942	0.75	+1.7
3,436,060	+		Pf6N2E2_2942	0.82	+2.2
3,436,060	+		Pf6N2E2_2942	0.82	+1.6
3,436,060	+		Pf6N2E2_2942	0.82	+2.6
3,436,061	-		Pf6N2E2_2942	0.82	+1.8
3,436,061	-		Pf6N2E2_2942	0.82	+0.7
3,436,061	-		Pf6N2E2_2942	0.82	+2.3
3,436,136	-		Pf6N2E2_2942	0.86	+2.6
3,436,136	-		Pf6N2E2_2942	0.86	+1.7
3,436,136	-		Pf6N2E2_2942	0.86	+2.2
3,436,225	+				+1.6
3,436,399	+				+4.6
3,436,499	+				+1.6
3,436,499	+				+0.9
3,436,500	-				-3.0
3,436,500	-				-2.2
3,436,559	+				+0.3
3,436,560	-				-0.2
3,436,560	-				-2.8
3,436,560	-				-1.0
3,436,573	-				-0.4
3,436,573	-				-2.5
3,436,678	-		Pf6N2E2_2943	0.30	-1.6
3,436,743	+		Pf6N2E2_2943	0.44	+0.7
3,436,744	-		Pf6N2E2_2943	0.44	-0.6
3,436,790	+		Pf6N2E2_2943	0.54	+0.5
3,436,790	+		Pf6N2E2_2943	0.54	+0.4
3,436,790	+		Pf6N2E2_2943	0.54	-0.2
3,436,814	+		Pf6N2E2_2943	0.59	-0.2
3,436,814	+		Pf6N2E2_2943	0.59	+1.0
3,436,814	+		Pf6N2E2_2943	0.59	+0.3
3,436,814	+		Pf6N2E2_2943	0.59	+1.0
3,436,814	+		Pf6N2E2_2943	0.59	-0.6
3,436,814	+		Pf6N2E2_2943	0.59	-0.1
3,436,814	+		Pf6N2E2_2943	0.59	+0.3
3,436,814	+		Pf6N2E2_2943	0.59	+0.8
3,436,815	-		Pf6N2E2_2943	0.60	+0.4
3,436,815	-		Pf6N2E2_2943	0.60	-1.2
3,436,815	-		Pf6N2E2_2943	0.60	-1.7
3,436,815	-		Pf6N2E2_2943	0.60	+0.1
3,436,815	-		Pf6N2E2_2943	0.60	+0.7
3,436,815	-		Pf6N2E2_2943	0.60	-0.4
3,436,815	-		Pf6N2E2_2943	0.60	-1.4
3,436,815	-		Pf6N2E2_2943	0.60	-2.4
3,436,815	-		Pf6N2E2_2943	0.60	-3.3
3,436,873	+		Pf6N2E2_2943	0.72	-1.1
3,437,011	+				-0.7
3,437,011	+				-0.6
3,437,011	+				-0.5
3,437,011	+				-0.1
3,437,011	+				+0.7
3,437,011	+				-0.1
3,437,012	-				+0.4
3,437,012	-				+0.1
3,437,160	+		Pf6N2E2_2944	0.12	-0.1
3,437,160	+		Pf6N2E2_2944	0.12	-0.9
3,437,266	-		Pf6N2E2_2944	0.26	-0.4