Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2772

Experiment: Nalidixic 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.004 mg/ml
3,259,647	+		Pf6N2E2_2771	0.40	-1.5
3,259,648	-		Pf6N2E2_2771	0.40	+0.1
3,259,648	-		Pf6N2E2_2771	0.40	+0.7
3,259,688	+		Pf6N2E2_2771	0.44	+0.3
3,259,689	-		Pf6N2E2_2771	0.44	-1.5
3,259,689	-		Pf6N2E2_2771	0.44	+0.3
3,259,717	+		Pf6N2E2_2771	0.47	+0.4
3,259,718	-		Pf6N2E2_2771	0.47	-1.4
3,259,718	-		Pf6N2E2_2771	0.47	+1.5
3,259,866	-		Pf6N2E2_2771	0.61	-0.4
3,259,866	-		Pf6N2E2_2771	0.61	-1.1
3,259,866	-		Pf6N2E2_2771	0.61	-2.1
3,259,866	-		Pf6N2E2_2771	0.61	-1.0
3,260,060	+		Pf6N2E2_2771	0.80	+0.5
3,260,090	+		Pf6N2E2_2771	0.83	-0.5
3,260,090	+		Pf6N2E2_2771	0.83	+0.1
3,260,091	-		Pf6N2E2_2771	0.83	+1.0
3,260,091	-		Pf6N2E2_2771	0.83	+0.7
3,260,091	-		Pf6N2E2_2771	0.83	-0.0
3,260,091	-		Pf6N2E2_2771	0.83	+0.7
3,260,091	-		Pf6N2E2_2771	0.83	-0.5
3,260,091	-		Pf6N2E2_2771	0.83	+0.0
3,260,109	+		Pf6N2E2_2771	0.84	+0.6
3,260,110	-		Pf6N2E2_2771	0.84	-0.5
3,260,267	+				-0.4
3,260,267	+				+0.1
3,260,267	+				+1.8
3,260,267	+				+0.0
3,260,268	-				-1.0
3,260,268	-				-0.3
3,260,269	+				+0.1
3,260,269	+				-1.7
3,260,270	-				-3.8
3,260,517	+				+0.1
3,260,517	+				-0.6
3,260,517	+				-0.1
3,260,517	+				+0.9
3,260,518	-				+0.3
3,260,705	+		Pf6N2E2_2772	0.27	-1.2
3,260,821	+		Pf6N2E2_2772	0.44	-0.5
3,260,821	+		Pf6N2E2_2772	0.44	-1.7
3,260,821	+		Pf6N2E2_2772	0.44	-1.5
3,260,822	-		Pf6N2E2_2772	0.44	-0.8
3,260,822	-		Pf6N2E2_2772	0.44	-1.5
3,260,913	+		Pf6N2E2_2772	0.57	-2.3
3,260,913	+		Pf6N2E2_2772	0.57	+0.0
3,260,913	+		Pf6N2E2_2772	0.57	-2.0
3,260,913	+		Pf6N2E2_2772	0.57	-3.5
3,260,914	-		Pf6N2E2_2772	0.57	+0.3
3,260,914	-		Pf6N2E2_2772	0.57	-1.3
3,260,914	-		Pf6N2E2_2772	0.57	-0.8
3,260,914	-		Pf6N2E2_2772	0.57	-0.4
3,260,917	+		Pf6N2E2_2772	0.58	-0.6
3,261,100	-		Pf6N2E2_2772	0.84	-3.1
3,261,100	-		Pf6N2E2_2772	0.84	-1.8
3,261,111	-		Pf6N2E2_2772	0.86	-0.1
3,261,135	+		Pf6N2E2_2772	0.89	-0.3
3,261,135	+		Pf6N2E2_2772	0.89	-2.4
3,261,135	+		Pf6N2E2_2772	0.89	+0.0
3,261,135	+		Pf6N2E2_2772	0.89	-1.2
3,261,135	+		Pf6N2E2_2772	0.89	-1.0
3,261,136	-		Pf6N2E2_2772	0.89	-1.2
3,261,136	-		Pf6N2E2_2772	0.89	-2.4
3,261,136	-		Pf6N2E2_2772	0.89	-2.2
3,261,136	-		Pf6N2E2_2772	0.89	-1.9
3,261,191	-				-1.8
3,261,251	+				-1.2
3,261,251	+				-1.8
3,261,251	+				-1.7
3,261,252	-				+0.6
3,261,252	-				+0.5
3,261,252	-				-1.2
3,261,252	-				-0.9
3,261,252	-				+0.5
3,261,307	+				-1.5
3,261,308	-				-0.7
3,261,314	+				-1.4
3,261,314	+				+0.0
3,261,315	-				+0.1
3,261,315	-				+0.8
3,261,315	-				+1.1
3,261,503	+		Pf6N2E2_2773	0.15	+0.6
3,261,503	+		Pf6N2E2_2773	0.15	-1.0
3,261,503	+		Pf6N2E2_2773	0.15	-1.1
3,261,561	-		Pf6N2E2_2773	0.20	-0.6
3,261,590	+		Pf6N2E2_2773	0.22	+0.5
3,261,625	+		Pf6N2E2_2773	0.26	+1.0
3,261,652	+		Pf6N2E2_2773	0.28	+0.1
3,261,653	-		Pf6N2E2_2773	0.28	+0.2
3,261,685	+		Pf6N2E2_2773	0.31	+0.0
3,261,685	+		Pf6N2E2_2773	0.31	+0.8
3,261,685	+		Pf6N2E2_2773	0.31	+0.7
3,261,685	+		Pf6N2E2_2773	0.31	+1.0
3,261,685	+		Pf6N2E2_2773	0.31	-0.0
3,261,685	+		Pf6N2E2_2773	0.31	-0.3
3,261,686	-		Pf6N2E2_2773	0.31	-3.5
3,261,686	-		Pf6N2E2_2773	0.31	-0.0
3,261,686	-		Pf6N2E2_2773	0.31	+0.1
3,261,689	+				+2.9
3,261,689	+		Pf6N2E2_2773	0.31	-0.5
3,261,689	+		Pf6N2E2_2773	0.31	-0.7
3,261,690	-		Pf6N2E2_2773	0.31	-0.7
3,261,690	-		Pf6N2E2_2773	0.31	+1.8
3,261,690	-		Pf6N2E2_2773	0.31	+0.4
3,261,727	-		Pf6N2E2_2773	0.35	-0.6
3,262,196	-		Pf6N2E2_2773	0.77	+0.7