Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2658

Experiment: Nalidixic 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.004 mg/ml
3,129,972	-		Pf6N2E2_2657	0.47	+0.6
3,129,972	-		Pf6N2E2_2657	0.47	-1.0
3,130,097	+		Pf6N2E2_2657	0.55	+0.4
3,130,097	+		Pf6N2E2_2657	0.55	-0.9
3,130,115	+		Pf6N2E2_2657	0.57	+1.5
3,130,115	+		Pf6N2E2_2657	0.57	+1.7
3,130,115	+		Pf6N2E2_2657	0.57	-0.4
3,130,115	+		Pf6N2E2_2657	0.57	+0.2
3,130,116	-		Pf6N2E2_2657	0.57	+1.5
3,130,433	+		Pf6N2E2_2657	0.78	-1.1
3,130,433	+		Pf6N2E2_2657	0.78	-0.0
3,130,433	+		Pf6N2E2_2657	0.78	+0.5
3,130,655	+				-0.1
3,130,655	+				-0.5
3,130,656	-				+1.3
3,130,656	-				+0.4
3,130,656	-				-1.2
3,130,656	-				-0.8
3,130,675	-				+0.5
3,130,697	+				+0.1
3,130,936	+				-0.8
3,130,936	+				-0.1
3,130,979	+				-0.5
3,130,979	+				-0.2
3,130,980	-				-0.8
3,130,996	+				-1.0
3,130,997	-				-1.0
3,131,060	-				-0.7
3,131,060	-				+0.1
3,131,095	+				+0.0
3,131,096	-				+0.6
3,131,161	+		Pf6N2E2_2658	0.14	-0.9
3,131,161	+		Pf6N2E2_2658	0.14	-0.7
3,131,162	-		Pf6N2E2_2658	0.14	-0.2
3,131,162	-		Pf6N2E2_2658	0.14	-0.6
3,131,167	+		Pf6N2E2_2658	0.14	-1.4
3,131,167	+		Pf6N2E2_2658	0.14	-1.8
3,131,167	+		Pf6N2E2_2658	0.14	-0.1
3,131,168	-		Pf6N2E2_2658	0.15	-0.3
3,131,168	-		Pf6N2E2_2658	0.15	-0.9
3,131,263	+		Pf6N2E2_2658	0.21	-0.2
3,131,263	+		Pf6N2E2_2658	0.21	+0.7
3,131,263	+		Pf6N2E2_2658	0.21	+0.7
3,131,293	+		Pf6N2E2_2658	0.24	-0.9
3,131,293	+		Pf6N2E2_2658	0.24	+0.1
3,131,293	+		Pf6N2E2_2658	0.24	-0.3
3,131,294	-		Pf6N2E2_2658	0.24	+0.3
3,131,294	-		Pf6N2E2_2658	0.24	-0.9
3,131,453	-		Pf6N2E2_2658	0.35	+0.8
3,131,453	-		Pf6N2E2_2658	0.35	+0.2
3,131,453	-		Pf6N2E2_2658	0.35	+0.6
3,131,453	-		Pf6N2E2_2658	0.35	+0.2
3,131,602	+		Pf6N2E2_2658	0.46	-0.8
3,131,602	+		Pf6N2E2_2658	0.46	-2.5
3,131,644	+		Pf6N2E2_2658	0.49	-0.8
3,131,644	+		Pf6N2E2_2658	0.49	-1.4
3,131,644	+		Pf6N2E2_2658	0.49	+0.8
3,131,645	-		Pf6N2E2_2658	0.49	-0.4
3,131,645	-		Pf6N2E2_2658	0.49	-0.8
3,131,656	+		Pf6N2E2_2658	0.50	-0.1
3,131,656	+		Pf6N2E2_2658	0.50	-1.9
3,131,657	-		Pf6N2E2_2658	0.50	+0.2
3,131,657	-		Pf6N2E2_2658	0.50	-0.3
3,131,657	-		Pf6N2E2_2658	0.50	-0.2
3,131,755	+		Pf6N2E2_2658	0.57	-0.2
3,131,807	+		Pf6N2E2_2658	0.61	+0.3
3,131,808	-		Pf6N2E2_2658	0.61	-0.0
3,132,112	+		Pf6N2E2_2658	0.83	+1.3
3,132,112	+		Pf6N2E2_2658	0.83	+0.1
3,132,112	+		Pf6N2E2_2658	0.83	+0.3
3,132,112	+		Pf6N2E2_2658	0.83	-1.0
3,132,112	+		Pf6N2E2_2658	0.83	+0.2
3,132,160	+		Pf6N2E2_2658	0.86	-1.0
3,132,160	+		Pf6N2E2_2658	0.86	+0.2
3,132,268	+				+1.5
3,132,268	+				-0.3
3,132,268	+				+0.7
3,132,269	-				+0.5
3,132,269	-				-0.1
3,132,271	+				-1.3
3,132,271	+				+0.1
3,132,272	-				+0.0
3,132,352	+				+0.1
3,132,353	-				-0.9
3,132,511	+				-1.2
3,132,512	-				+1.6
3,132,519	-				+0.3
3,132,589	+				+1.0
3,132,589	+				-2.2
3,132,590	-				+1.0
3,132,590	-				-0.3
3,132,590	-				-0.7
3,132,590	-				+0.6
3,132,590	-				-1.1
3,132,590	-				-0.7
3,132,756	+		Pf6N2E2_2659	0.87	-1.0
3,132,756	+		Pf6N2E2_2659	0.87	-0.6
3,132,778	+				+0.6
3,132,779	-				+0.2
3,132,782	-				+0.8
3,132,782	-				+0.3
3,132,782	-				+0.5
3,132,794	+				+1.6
3,133,101	+		Pf6N2E2_2660	0.27	+0.7
3,133,101	+		Pf6N2E2_2660	0.27	-0.5
3,133,102	-		Pf6N2E2_2660	0.27	-0.2
3,133,102	-		Pf6N2E2_2660	0.27	-0.2
3,133,262	+		Pf6N2E2_2660	0.45	-0.9
3,133,263	-		Pf6N2E2_2660	0.45	-0.3