Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2536

Experiment: Nalidixic 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.004 mg/ml
2,993,359	+		Pf6N2E2_2534	0.24	+0.3
2,993,360	-		Pf6N2E2_2534	0.25	-0.7
2,993,360	-		Pf6N2E2_2534	0.25	-0.2
2,993,413	+		Pf6N2E2_2534	0.42	+1.2
2,993,413	+		Pf6N2E2_2534	0.42	-0.4
2,993,414	-		Pf6N2E2_2534	0.43	+1.4
2,993,585	+				+0.1
2,993,585	+				+0.7
2,993,585	+				+0.3
2,993,585	+				+1.5
2,993,585	+				+1.3
2,993,585	+				+1.4
2,993,586	-				-0.1
2,993,586	-				+0.3
2,993,770	+		Pf6N2E2_2535	0.33	+0.4
2,993,771	-		Pf6N2E2_2535	0.33	+0.9
2,993,771	-		Pf6N2E2_2535	0.33	+0.8
2,993,818	+		Pf6N2E2_2535	0.42	-1.6
2,993,819	-		Pf6N2E2_2535	0.43	+0.3
2,993,819	-		Pf6N2E2_2535	0.43	+0.3
2,993,894	-		Pf6N2E2_2535	0.57	+0.1
2,993,974	+		Pf6N2E2_2535	0.72	+1.2
2,993,974	+		Pf6N2E2_2535	0.72	-1.1
2,993,974	+		Pf6N2E2_2535	0.72	+0.9
2,993,974	+		Pf6N2E2_2535	0.72	+0.5
2,993,974	+		Pf6N2E2_2535	0.72	-0.1
2,993,975	-		Pf6N2E2_2535	0.73	+0.8
2,993,975	-		Pf6N2E2_2535	0.73	+0.5
2,993,975	-		Pf6N2E2_2535	0.73	+1.1
2,993,975	-		Pf6N2E2_2535	0.73	+0.3
2,993,975	-		Pf6N2E2_2535	0.73	+0.5
2,993,975	-		Pf6N2E2_2535	0.73	-0.5
2,993,975	-		Pf6N2E2_2535	0.73	-1.2
2,994,132	+				-2.3
2,994,133	-				-0.9
2,994,284	-				+0.1
2,994,284	-				-1.0
2,994,303	+				+0.8
2,994,871	-		Pf6N2E2_2536	0.40	-0.1
2,994,941	-		Pf6N2E2_2536	0.45	-1.6
2,995,597	+				+0.1
2,995,643	-				+1.1
2,995,686	+				-1.0
2,995,686	+				+0.7
2,995,687	-				-0.3
2,995,687	-				-1.7
2,995,687	-				-0.2
2,995,780	+				+0.2
2,995,849	-				+1.4
2,995,986	+		Pf6N2E2_2537	0.14	+0.2
2,995,986	+		Pf6N2E2_2537	0.14	+0.3
2,995,987	-		Pf6N2E2_2537	0.14	-0.7
2,995,987	-		Pf6N2E2_2537	0.14	+1.8
2,995,987	-		Pf6N2E2_2537	0.14	-1.7
2,995,987	-		Pf6N2E2_2537	0.14	-0.5
2,995,987	-		Pf6N2E2_2537	0.14	-1.1
2,995,987	-		Pf6N2E2_2537	0.14	-1.2
2,996,221	-		Pf6N2E2_2537	0.38	+0.8
2,996,221	-		Pf6N2E2_2537	0.38	-0.8
2,996,221	-		Pf6N2E2_2537	0.38	-0.5
2,996,221	-		Pf6N2E2_2537	0.38	-1.6
2,996,283	+		Pf6N2E2_2537	0.44	-0.1
2,996,283	+		Pf6N2E2_2537	0.44	+0.3
2,996,283	+		Pf6N2E2_2537	0.44	-2.0
2,996,284	-		Pf6N2E2_2537	0.45	+0.5
2,996,284	-		Pf6N2E2_2537	0.45	-0.9
2,996,284	-		Pf6N2E2_2537	0.45	+0.5
2,996,284	-		Pf6N2E2_2537	0.45	-0.5
2,996,284	-		Pf6N2E2_2537	0.45	-1.6
2,996,334	+		Pf6N2E2_2537	0.50	+0.8
2,996,334	+		Pf6N2E2_2537	0.50	-1.7
2,996,335	-		Pf6N2E2_2537	0.50	+1.0
2,996,387	-		Pf6N2E2_2537	0.55	+0.4
2,996,538	+		Pf6N2E2_2537	0.70	-1.1
2,996,539	-		Pf6N2E2_2537	0.71	+1.0
2,996,547	+		Pf6N2E2_2537	0.71	-1.2
2,996,547	+		Pf6N2E2_2537	0.71	-0.4
2,996,547	+		Pf6N2E2_2537	0.71	-1.1
2,996,547	+		Pf6N2E2_2537	0.71	-0.2
2,996,548	-		Pf6N2E2_2537	0.71	+0.7
2,996,548	-		Pf6N2E2_2537	0.71	-0.8
2,996,548	-		Pf6N2E2_2537	0.71	+0.4
2,996,548	-		Pf6N2E2_2537	0.71	+0.6
2,996,548	-		Pf6N2E2_2537	0.71	-2.1
2,996,548	-		Pf6N2E2_2537	0.71	+0.1
2,996,548	-		Pf6N2E2_2537	0.71	+0.6
2,996,548	-		Pf6N2E2_2537	0.71	+0.3
2,996,548	-		Pf6N2E2_2537	0.71	+0.2
2,996,548	-		Pf6N2E2_2537	0.71	+0.4
2,996,548	-		Pf6N2E2_2537	0.71	+0.3
2,996,643	+		Pf6N2E2_2537	0.81	-1.3
2,996,643	+		Pf6N2E2_2537	0.81	-0.1
2,996,643	+		Pf6N2E2_2537	0.81	-1.1
2,996,644	-		Pf6N2E2_2537	0.81	+0.6