Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2491

Experiment: Nalidixic 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.004 mg/ml
2,936,058	+				-0.7
2,936,059	-				-0.5
2,936,272	-				-0.0
2,936,388	+		Pf6N2E2_2490	0.17	+0.7
2,936,490	+		Pf6N2E2_2490	0.31	-0.3
2,936,668	-		Pf6N2E2_2490	0.57	-0.3
2,936,668	-		Pf6N2E2_2490	0.57	+0.2
2,936,883	+		Pf6N2E2_2490	0.88	-0.7
2,936,883	+		Pf6N2E2_2490	0.88	-0.5
2,936,883	+		Pf6N2E2_2490	0.88	-0.5
2,936,883	+		Pf6N2E2_2490	0.88	-0.6
2,936,883	+		Pf6N2E2_2490	0.88	+0.9
2,936,884	-		Pf6N2E2_2490	0.88	+0.4
2,937,009	-				-1.5
2,937,067	-				+0.1
2,937,214	+				-2.6
2,937,214	+				-0.4
2,937,214	+				-1.2
2,937,214	+				-0.8
2,937,214	+				+0.2
2,937,214	+				-0.8
2,937,215	-				+0.5
2,937,215	-				-0.6
2,937,215	-				+0.1
2,937,215	-				+0.3
2,937,400	+		Pf6N2E2_2491	0.14	-2.1
2,937,400	+		Pf6N2E2_2491	0.14	-0.1
2,937,401	-		Pf6N2E2_2491	0.14	-0.8
2,937,401	-		Pf6N2E2_2491	0.14	-1.1
2,937,401	-		Pf6N2E2_2491	0.14	+0.2
2,937,401	-		Pf6N2E2_2491	0.14	+2.8
2,937,401	-		Pf6N2E2_2491	0.14	-0.1
2,937,568	+		Pf6N2E2_2491	0.20	-0.1
2,937,569	-		Pf6N2E2_2491	0.20	-0.7
2,938,346	-		Pf6N2E2_2491	0.50	-0.8
2,938,439	+		Pf6N2E2_2491	0.53	+0.6
2,938,439	+		Pf6N2E2_2491	0.53	-1.6
2,938,516	+		Pf6N2E2_2491	0.56	-0.7
2,938,516	+		Pf6N2E2_2491	0.56	-0.3
2,938,516	+		Pf6N2E2_2491	0.56	-0.6
2,938,516	+		Pf6N2E2_2491	0.56	+0.7
2,938,516	+		Pf6N2E2_2491	0.56	-0.1
2,938,517	-		Pf6N2E2_2491	0.56	+1.3
2,938,517	-		Pf6N2E2_2491	0.56	-1.0
2,938,517	-		Pf6N2E2_2491	0.56	-1.1
2,938,517	-		Pf6N2E2_2491	0.56	-0.1
2,938,517	-		Pf6N2E2_2491	0.56	-0.5
2,938,687	-		Pf6N2E2_2491	0.62	-0.2
2,938,802	-		Pf6N2E2_2491	0.67	-0.2
2,938,839	+		Pf6N2E2_2491	0.68	-0.7
2,938,839	+		Pf6N2E2_2491	0.68	-1.9
2,938,840	-		Pf6N2E2_2491	0.68	-0.6
2,939,104	+		Pf6N2E2_2491	0.78	+0.0
2,939,104	+		Pf6N2E2_2491	0.78	+0.1
2,939,104	+		Pf6N2E2_2491	0.78	-0.6
2,939,104	+		Pf6N2E2_2491	0.78	+0.1
2,939,104	+		Pf6N2E2_2491	0.78	-0.7
2,939,104	+		Pf6N2E2_2491	0.78	+0.0
2,939,105	-		Pf6N2E2_2491	0.78	-0.1
2,939,105	-		Pf6N2E2_2491	0.78	-2.2
2,939,105	-		Pf6N2E2_2491	0.78	-0.2
2,939,105	-		Pf6N2E2_2491	0.78	-0.8
2,939,105	-		Pf6N2E2_2491	0.78	-0.9
2,939,279	-		Pf6N2E2_2491	0.85	-0.0
2,939,279	-		Pf6N2E2_2491	0.85	-1.8
2,939,279	-		Pf6N2E2_2491	0.85	+0.2
2,939,440	+				+0.5
2,939,441	-				+0.1
2,939,451	+				+0.0
2,939,451	+				-0.5
2,939,451	+				+1.0
2,939,451	+				-0.1
2,939,452	-				+0.2
2,939,578	+				-0.5
2,939,578	+				+0.6
2,939,578	+				+0.4
2,939,578	+				+0.1
2,939,579	-				-0.8
2,939,579	-				+0.3
2,939,579	-				+1.2
2,939,579	-				-0.7
2,939,708	+				-0.5
2,939,709	-				+0.3
2,939,753	-				-0.3
2,939,818	+				-0.4
2,939,818	+				-0.0
2,939,819	-				+0.0
2,939,819	-				-1.9
2,939,959	+		Pf6N2E2_2492	0.26	+2.8
2,940,324	+				-2.4
2,940,325	-				-0.2
2,940,325	-				+0.2
2,940,325	-				-1.2
2,940,327	+				+0.1
2,940,328	-				-0.1
2,940,356	+				+1.2
2,940,356	+				-0.9
2,940,356	+				+0.4
2,940,356	+				+0.3
2,940,357	-				+0.7
2,940,357	-				-0.2
2,940,357	-				-0.8
2,940,357	-				+0.6
2,940,385	+				-1.3
2,940,386	-				-0.7
2,940,406	+				+0.3
2,940,507	+				-1.1
2,940,533	-				+0.9
2,940,533	-				-0.9
2,940,536	+				+0.4
2,940,536	+				+1.3
2,940,536	+				-1.0
2,940,536	+				-1.0
2,940,537	-				+0.4
2,940,537	-				-3.8
2,940,537	-				-0.1
2,940,537	-				-0.2
2,940,582	-				-1.8
2,940,582	-				-1.6
2,940,631	+				-0.5
2,940,631	+				-0.9
2,940,631	+				-0.6
2,940,632	-				-2.2
2,940,632	-				-1.6