Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2101

Experiment: Nalidixic 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.004 mg/ml
2,500,204	+				-0.4
2,500,204	+				+0.0
2,500,204	+				+0.7
2,500,204	+				-0.7
2,500,205	-				+0.6
2,500,205	-				+0.6
2,500,205	-				+0.9
2,500,205	-				+0.8
2,500,205	-				+1.4
2,500,205	-				+1.2
2,500,205	-				-0.3
2,500,205	-				-0.6
2,500,205	-				-0.0
2,500,408	-				+0.8
2,500,408	-				-0.6
2,500,408	-				+0.2
2,500,408	-				-0.4
2,500,408	-				-0.7
2,500,411	+				+0.1
2,500,412	-				-1.0
2,500,412	-				-0.4
2,500,425	-				+0.6
2,500,432	-				+0.7
2,500,494	-				+0.2
2,500,699	+				+0.3
2,500,700	-				+1.6
2,500,713	-				+1.4
2,500,732	+				-0.1
2,500,732	+				-1.5
2,500,732	+				-0.6
2,500,732	+				-0.4
2,500,733	-				+0.8
2,500,733	-				+0.3
2,500,733	-				-2.4
2,500,805	+				+0.4
2,500,805	+				-0.0
2,500,806	-				-1.1
2,500,806	-				-0.8
2,500,806	-				-0.5
2,500,806	-				+0.0
2,500,806	-				-0.1
2,500,809	+				-0.4
2,500,809	+				+0.4
2,500,810	-				+0.8
2,500,810	-				+2.3
2,500,868	+				+0.3
2,500,868	+				-0.9
2,500,868	+				-0.1
2,500,868	+				+1.0
2,500,869	-				-1.5
2,500,869	-				+0.1
2,500,869	-				+0.2
2,500,869	-				+2.5
2,500,869	-				-0.0
2,500,896	+				-0.2
2,500,896	+				-1.0
2,500,896	+				-0.1
2,500,896	+				+0.5
2,500,896	+				+0.3
2,500,896	+				-1.8
2,500,896	+				-0.7
2,500,896	+				-1.1
2,500,896	+				-0.2
2,500,896	+				-2.6
2,500,897	-				-1.5
2,500,897	-				-0.0
2,500,897	-				-0.0
2,500,897	-				-2.6
2,500,897	-				-0.8
2,500,897	-				-1.8
2,500,897	-				+0.8
2,500,897	-				-0.3
2,500,897	-				+0.3
2,500,916	+				+0.8
2,500,917	-				-1.4
2,500,950	+				-0.7
2,500,983	+				+1.0
2,501,002	+				+0.5
2,501,062	+		Pf6N2E2_2101	0.36	+0.4
2,501,063	-		Pf6N2E2_2101	0.36	+0.2
2,501,080	+		Pf6N2E2_2101	0.44	-0.1
2,501,080	+		Pf6N2E2_2101	0.44	+0.4
2,501,081	-		Pf6N2E2_2101	0.44	+0.2
2,501,081	-		Pf6N2E2_2101	0.44	+1.3
2,501,081	-		Pf6N2E2_2101	0.44	-0.7
2,501,081	-		Pf6N2E2_2101	0.44	+0.5
2,501,081	-		Pf6N2E2_2101	0.44	+1.9
2,501,081	-		Pf6N2E2_2101	0.44	+0.4
2,501,266	+				+0.1
2,501,267	-				+0.9
2,501,462	-		Pf6N2E2_2102	0.22	+1.6
2,501,462	-		Pf6N2E2_2102	0.22	+0.1
2,501,462	-		Pf6N2E2_2102	0.22	-0.9
2,501,462	-		Pf6N2E2_2102	0.22	+1.3
2,501,617	+		Pf6N2E2_2102	0.39	+1.0
2,501,617	+		Pf6N2E2_2102	0.39	+0.9
2,501,674	+		Pf6N2E2_2102	0.45	-0.3
2,501,674	+		Pf6N2E2_2102	0.45	-1.2
2,501,675	-		Pf6N2E2_2102	0.45	-0.0
2,501,675	-		Pf6N2E2_2102	0.45	-0.6
2,501,757	+		Pf6N2E2_2102	0.54	-1.3
2,501,758	-		Pf6N2E2_2102	0.54	+1.3
2,501,847	-		Pf6N2E2_2102	0.64	+0.4
2,501,847	-		Pf6N2E2_2102	0.64	+0.5
2,501,991	-		Pf6N2E2_2102	0.80	+0.4
2,502,052	+		Pf6N2E2_2102	0.87	-0.1
2,502,173	+				-0.2
2,502,173	+				-0.1