Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2068

Experiment: Nalidixic 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.004 mg/ml
2,459,648	+		Pf6N2E2_2067	0.64	-0.4
2,459,648	+		Pf6N2E2_2067	0.64	-1.1
2,459,648	+		Pf6N2E2_2067	0.64	-1.9
2,459,648	+		Pf6N2E2_2067	0.64	-0.9
2,459,649	-		Pf6N2E2_2067	0.64	-1.6
2,459,649	-		Pf6N2E2_2067	0.64	-1.1
2,459,649	-		Pf6N2E2_2067	0.64	-1.0
2,459,649	-		Pf6N2E2_2067	0.64	-1.0
2,459,768	+		Pf6N2E2_2067	0.69	-1.0
2,459,768	+		Pf6N2E2_2067	0.69	-3.0
2,459,768	+		Pf6N2E2_2067	0.69	-0.2
2,459,768	+		Pf6N2E2_2067	0.69	-0.0
2,459,768	+		Pf6N2E2_2067	0.69	+0.4
2,459,768	+		Pf6N2E2_2067	0.69	-0.8
2,459,768	+		Pf6N2E2_2067	0.69	-1.3
2,459,769	-		Pf6N2E2_2067	0.69	+0.1
2,459,769	-		Pf6N2E2_2067	0.69	-0.0
2,459,769	-		Pf6N2E2_2067	0.69	-0.9
2,459,769	-		Pf6N2E2_2067	0.69	-0.6
2,459,769	-		Pf6N2E2_2067	0.69	-0.8
2,459,769	-		Pf6N2E2_2067	0.69	-0.3
2,459,945	+		Pf6N2E2_2067	0.77	-0.8
2,459,945	+		Pf6N2E2_2067	0.77	-2.3
2,459,946	-		Pf6N2E2_2067	0.77	-0.7
2,460,171	-		Pf6N2E2_2067	0.87	-0.8
2,460,171	-		Pf6N2E2_2067	0.87	-1.0
2,460,212	+		Pf6N2E2_2067	0.89	-0.2
2,460,212	+		Pf6N2E2_2067	0.89	-0.3
2,460,212	+		Pf6N2E2_2067	0.89	-0.0
2,460,212	+		Pf6N2E2_2067	0.89	-1.4
2,460,212	+		Pf6N2E2_2067	0.89	-0.7
2,460,212	+		Pf6N2E2_2067	0.89	-0.9
2,460,212	+		Pf6N2E2_2067	0.89	-1.0
2,460,213	-		Pf6N2E2_2067	0.89	+0.1
2,460,213	-		Pf6N2E2_2067	0.89	-0.7
2,460,213	-		Pf6N2E2_2067	0.89	-0.9
2,460,213	-		Pf6N2E2_2067	0.89	-0.3
2,460,213	-		Pf6N2E2_2067	0.89	-0.7
2,460,213	-		Pf6N2E2_2067	0.89	-1.4
2,460,213	-		Pf6N2E2_2067	0.89	-0.6
2,460,258	-				-1.5
2,460,258	-				-1.2
2,460,258	-				+0.7
2,460,330	-				-1.5
2,460,330	-				-0.1
2,460,387	-				+0.6
2,460,387	-				-0.1
2,460,454	+				-1.0
2,460,454	+				+1.0
2,460,484	+				-0.8
2,460,485	-				-1.4
2,460,485	-				-3.3
2,460,491	+				+1.5
2,460,491	+				-0.2
2,460,601	+				+0.2
2,460,622	-				-0.5
2,460,627	+				-1.1
2,460,653	-				-0.3
2,460,724	+				-1.4
2,460,937	+				-1.5
2,461,123	+		Pf6N2E2_2068	0.13	-0.6
2,461,123	+		Pf6N2E2_2068	0.13	-2.3
2,461,774	+		Pf6N2E2_2068	0.31	-0.3
2,461,774	+		Pf6N2E2_2068	0.31	-1.4
2,461,775	-		Pf6N2E2_2068	0.31	-1.6
2,462,248	+		Pf6N2E2_2068	0.44	-2.7
2,462,248	+		Pf6N2E2_2068	0.44	-1.5
2,462,249	-		Pf6N2E2_2068	0.44	-0.5
2,462,249	-		Pf6N2E2_2068	0.44	-1.7
2,462,249	-		Pf6N2E2_2068	0.44	-1.8
2,462,249	-		Pf6N2E2_2068	0.44	-0.9
2,462,279	-		Pf6N2E2_2068	0.44	+0.0
2,462,449	+		Pf6N2E2_2068	0.49	-0.5
2,462,449	+		Pf6N2E2_2068	0.49	-1.6
2,462,450	-		Pf6N2E2_2068	0.49	+0.3
2,462,548	+		Pf6N2E2_2068	0.52	-1.8
2,462,548	+		Pf6N2E2_2068	0.52	-1.0
2,462,548	+		Pf6N2E2_2068	0.52	+0.5
2,462,548	+		Pf6N2E2_2068	0.52	-0.0
2,462,549	-		Pf6N2E2_2068	0.52	-1.5
2,463,182	-		Pf6N2E2_2068	0.69	-1.6
2,463,202	+		Pf6N2E2_2068	0.69	-0.6
2,463,202	+		Pf6N2E2_2068	0.69	-1.0
2,463,203	-		Pf6N2E2_2068	0.69	-0.1
2,463,203	-		Pf6N2E2_2068	0.69	-1.0
2,463,295	+		Pf6N2E2_2068	0.72	-1.5
2,463,353	-		Pf6N2E2_2068	0.73	+0.5
2,463,353	-		Pf6N2E2_2068	0.73	-3.0
2,463,469	+		Pf6N2E2_2068	0.77	-0.6
2,463,569	-		Pf6N2E2_2068	0.79	+0.4
2,463,632	+		Pf6N2E2_2068	0.81	-1.9
2,463,808	+		Pf6N2E2_2068	0.86	+0.1
2,463,809	-		Pf6N2E2_2068	0.86	-0.7
2,463,865	+		Pf6N2E2_2068	0.87	-1.1
2,463,886	+		Pf6N2E2_2068	0.88	-2.4
2,463,886	+		Pf6N2E2_2068	0.88	+0.7
2,464,027	+				+1.0
2,464,027	+				-2.4
2,464,027	+				-2.1
2,464,027	+				-0.9
2,464,027	+				+0.1
2,464,028	-				-3.2
2,464,028	-				-2.2
2,464,198	+				-0.0
2,464,222	+				-0.2
2,464,223	-				-0.3
2,464,336	+				+0.0
2,464,336	+				-1.4
2,464,336	+				-1.1
2,464,336	+				-1.8
2,464,336	+				-0.1
2,464,336	+				-0.8
2,464,355	+				+0.3
2,464,355	+				-0.5
2,464,356	-				-0.3
2,464,368	+				-0.3
2,464,368	+				-1.1
2,464,368	+				+0.9
2,464,368	+				-0.2
2,464,369	-				-0.2
2,464,369	-				-3.1
2,464,380	+				-0.1
2,464,381	-				-0.6
2,464,381	-				+0.4
2,464,381	-				+1.4
2,464,381	-				+0.3
2,464,381	-				+0.1
2,464,414	-				-0.1
2,464,545	+		Pf6N2E2_2069	0.69	-0.5
2,464,545	+		Pf6N2E2_2069	0.69	+0.2
2,464,546	-		Pf6N2E2_2069	0.70	+0.3
2,464,570	+		Pf6N2E2_2069	0.81	-1.1
2,464,594	+				+0.5
2,464,594	+				+0.3
2,464,595	-				-0.6
2,464,595	-				-0.1
2,464,595	-				-0.4
2,464,607	+				-3.5
2,464,609	+				-0.5
2,464,609	+				-0.5
2,464,610	-				-1.5
2,464,610	-				-1.1
2,464,610	-				+1.4
2,464,610	-				+0.9
2,464,610	-				+0.3
2,464,610	-				-2.4
2,464,610	-				+0.4
2,464,616	+				-0.3
2,464,616	+				-0.0
2,464,616	+				+1.7
2,464,622	+				-0.6
2,464,623	-				-1.3
2,464,623	-				-1.9
2,464,623	-				-0.7
2,464,661	+				-0.3
2,464,662	-				+0.6
2,464,721	+				+1.0
2,464,776	-				+0.6
2,464,904	-		Pf6N2E2_2070	0.21	-0.3
2,464,904	-		Pf6N2E2_2070	0.21	+0.1
2,464,904	-		Pf6N2E2_2070	0.21	+0.1
2,465,141	+		Pf6N2E2_2070	0.45	+0.3
2,465,168	+		Pf6N2E2_2070	0.47	-1.7
2,465,169	-		Pf6N2E2_2070	0.47	-0.3
2,465,169	-		Pf6N2E2_2070	0.47	-2.0
2,465,188	+		Pf6N2E2_2070	0.49	+0.9
2,465,189	-		Pf6N2E2_2070	0.49	+0.9
2,465,189	-		Pf6N2E2_2070	0.49	+0.6
2,465,217	-		Pf6N2E2_2070	0.52	-0.2