Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2041

Experiment: Nalidixic 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.004 mg/ml
2,429,588	+		Pf6N2E2_2040	0.29	-0.2
2,429,588	+		Pf6N2E2_2040	0.29	+0.5
2,429,589	-		Pf6N2E2_2040	0.29	+0.1
2,429,589	-		Pf6N2E2_2040	0.29	+0.7
2,429,591	+		Pf6N2E2_2040	0.29	-1.5
2,429,591	+		Pf6N2E2_2040	0.29	-0.0
2,429,591	+		Pf6N2E2_2040	0.29	+1.1
2,429,591	+		Pf6N2E2_2040	0.29	-0.9
2,429,592	-		Pf6N2E2_2040	0.29	+0.1
2,429,592	-		Pf6N2E2_2040	0.29	+1.0
2,430,076	+		Pf6N2E2_2040	0.64	+0.3
2,430,214	+		Pf6N2E2_2040	0.74	+0.5
2,430,214	+		Pf6N2E2_2040	0.74	-1.0
2,430,452	+				+0.9
2,430,452	+				-0.1
2,430,453	-				-0.5
2,430,453	-				+0.1
2,430,512	+				-0.6
2,430,512	+				-0.4
2,430,513	-				+0.5
2,430,513	-				+0.1
2,430,559	-				-0.5
2,431,045	+		Pf6N2E2_2041	0.59	+0.7
2,431,046	-		Pf6N2E2_2041	0.59	-1.1
2,431,046	-		Pf6N2E2_2041	0.59	-1.7
2,431,046	-		Pf6N2E2_2041	0.59	-0.6
2,431,046	-		Pf6N2E2_2041	0.59	-1.3
2,431,046	-		Pf6N2E2_2041	0.59	+0.1
2,431,292	+				-0.9
2,431,293	-				-0.8
2,431,293	-				-1.6
2,431,293	-				+1.2
2,431,335	+				-0.0
2,431,336	-				+0.1
2,431,361	-				+0.4
2,431,498	+				-0.4
2,431,499	-				+0.3
2,431,502	+				+0.1
2,431,503	-				+0.2
2,431,503	-				-0.8
2,431,503	-				+0.9
2,431,503	-				-1.4
2,431,524	+				-1.0
2,431,524	+				+0.0
2,431,524	+				+1.9
2,431,525	-				-0.0
2,431,525	-				-1.7
2,431,525	-				-0.0
2,432,231	+		Pf6N2E2_2042	0.35	-1.1
2,432,232	-		Pf6N2E2_2042	0.35	+0.5
2,432,354	+		Pf6N2E2_2042	0.41	-0.8
2,432,354	+		Pf6N2E2_2042	0.41	+0.3
2,432,354	+		Pf6N2E2_2042	0.41	-0.6
2,432,354	+		Pf6N2E2_2042	0.41	+0.2
2,432,355	-		Pf6N2E2_2042	0.41	+0.0
2,432,355	-		Pf6N2E2_2042	0.41	-1.5
2,432,355	-		Pf6N2E2_2042	0.41	-0.1