Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1691
Experiment: Nalidixic 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Nalidixic 0.004 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,000,619 | + | -0.0 | |||
2,000,712 | - | +0.1 | |||
2,000,712 | - | +0.2 | |||
2,000,750 | - | +0.6 | |||
2,000,969 | - | +0.6 | |||
2,001,017 | + | +0.4 | |||
2,001,088 | + | +0.8 | |||
2,001,089 | - | -0.2 | |||
2,001,094 | + | +0.6 | |||
2,001,094 | + | +0.7 | |||
2,001,094 | + | -0.9 | |||
2,001,094 | + | -0.1 | |||
2,001,094 | + | +0.5 | |||
2,001,095 | - | -1.1 | |||
2,001,125 | + | Pf6N2E2_1691 | 0.13 | -0.5 | |
2,001,126 | - | Pf6N2E2_1691 | 0.14 | -2.6 | |
2,001,158 | + | Pf6N2E2_1691 | 0.27 | -2.0 | |
2,001,202 | + | Pf6N2E2_1691 | 0.45 | +1.4 | |
2,001,348 | + | -0.1 | |||
2,001,349 | - | -1.3 | |||
2,001,351 | + | -0.9 | |||
2,001,351 | + | -0.2 | |||
2,001,351 | + | -0.6 | |||
2,001,395 | - | +1.0 | |||
2,001,512 | + | -1.5 | |||
2,001,603 | + | +0.7 | |||
2,001,924 | - | Pf6N2E2_1692 | 0.54 | +1.2 | |
2,001,924 | - | Pf6N2E2_1692 | 0.54 | -0.5 | |
2,001,924 | - | Pf6N2E2_1692 | 0.54 | -0.2 | |
2,001,925 | + | Pf6N2E2_1692 | 0.54 | -0.9 | |
2,001,926 | - | Pf6N2E2_1692 | 0.54 | -1.8 | |
2,002,084 | + | Pf6N2E2_1692 | 0.79 | +1.7 | |
2,002,085 | - | Pf6N2E2_1692 | 0.79 | -1.4 |
Or see this region's nucleotide sequence