Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1343

Experiment: Nalidixic 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.004 mg/ml
1,578,512	+		Pf6N2E2_1342	0.80	-0.2
1,578,513	-		Pf6N2E2_1342	0.80	+0.3
1,578,800	+				+0.1
1,578,800	+				+0.5
1,578,800	+				+0.6
1,579,015	+				+0.1
1,579,072	+				+0.6
1,579,072	+				-0.2
1,579,111	-				+0.4
1,579,153	+				-1.1
1,579,153	+				-0.2
1,579,154	-				+0.6
1,579,341	-		Pf6N2E2_1343	0.14	-2.0
1,579,610	+		Pf6N2E2_1343	0.44	-0.5
1,579,610	+		Pf6N2E2_1343	0.44	-1.2
1,579,611	-		Pf6N2E2_1343	0.44	-1.8
1,579,668	-		Pf6N2E2_1343	0.50	-0.3
1,579,928	+		Pf6N2E2_1343	0.78	+0.8
1,579,928	+		Pf6N2E2_1343	0.78	-1.4
1,580,169	+				+1.2
1,580,199	+				-1.2
1,580,200	-				+1.0
1,580,200	-				-0.9
1,580,200	-				+0.7
1,580,453	+		Pf6N2E2_1344	0.25	-1.2
1,580,453	+		Pf6N2E2_1344	0.25	-1.1
1,580,453	+		Pf6N2E2_1344	0.25	+0.1
1,580,453	+		Pf6N2E2_1344	0.25	+0.6
1,580,453	+		Pf6N2E2_1344	0.25	-0.3
1,580,453	+		Pf6N2E2_1344	0.25	+0.8
1,580,454	-		Pf6N2E2_1344	0.25	+0.1
1,580,506	-		Pf6N2E2_1344	0.31	+0.2
1,580,550	+		Pf6N2E2_1344	0.36	-0.7
1,580,651	+		Pf6N2E2_1344	0.48	+0.1
1,580,709	-		Pf6N2E2_1344	0.55	+0.3
1,580,709	-		Pf6N2E2_1344	0.55	-0.0
1,580,753	+		Pf6N2E2_1344	0.60	+1.0
1,580,753	+		Pf6N2E2_1344	0.60	-0.9
1,580,753	+		Pf6N2E2_1344	0.60	-0.1
1,580,753	+		Pf6N2E2_1344	0.60	+0.7
1,580,754	-		Pf6N2E2_1344	0.60	-0.6
1,580,793	-		Pf6N2E2_1344	0.65	+0.2
1,580,794	+		Pf6N2E2_1344	0.65	-2.7
1,580,794	+		Pf6N2E2_1344	0.65	-0.1
1,580,795	-		Pf6N2E2_1344	0.65	-0.7
1,580,987	+		Pf6N2E2_1344	0.88	-0.1
1,580,987	+		Pf6N2E2_1344	0.88	-0.4
1,580,987	+		Pf6N2E2_1344	0.88	+0.1
1,580,991	-		Pf6N2E2_1344	0.89	+0.3
1,580,991	-		Pf6N2E2_1344	0.89	+1.1
1,581,107	-				-0.3