Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1152

Experiment: Nalidixic 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.004 mg/ml
1,349,322	+		Pf6N2E2_1151	0.44	-0.4
1,349,323	-		Pf6N2E2_1151	0.44	-1.3
1,349,422	+		Pf6N2E2_1151	0.51	-1.9
1,349,460	+		Pf6N2E2_1151	0.54	+1.2
1,349,460	+		Pf6N2E2_1151	0.54	+1.4
1,349,460	+		Pf6N2E2_1151	0.54	+0.4
1,349,460	+		Pf6N2E2_1151	0.54	+0.4
1,349,576	+		Pf6N2E2_1151	0.63	-1.9
1,349,952	+		Pf6N2E2_1151	0.90	+0.7
1,349,952	+		Pf6N2E2_1151	0.90	+0.1
1,349,952	+		Pf6N2E2_1151	0.90	-1.3
1,350,060	-				+0.7
1,350,060	-				+0.5
1,350,060	-				-0.2
1,350,064	-				+0.7
1,350,064	-				-0.8
1,350,166	+				-0.8
1,350,191	+				+0.2
1,350,192	-				+0.2
1,350,230	-				+0.4
1,350,230	-				-0.7
1,350,406	+		Pf6N2E2_1152	0.30	-0.6
1,350,407	-		Pf6N2E2_1152	0.30	-1.4
1,350,667	+		Pf6N2E2_1152	0.65	-0.9
1,350,709	+		Pf6N2E2_1152	0.71	-1.2
1,350,709	+		Pf6N2E2_1152	0.71	-0.9
1,350,710	-		Pf6N2E2_1152	0.71	-0.3
1,350,871	+				+0.9
1,350,871	+				-0.7
1,350,871	+				-1.7
1,350,871	+				+0.9
1,350,872	-				-0.7
1,350,925	+				+0.1
1,350,925	+				-1.2
1,350,925	+				-0.5
1,350,925	+				+0.3
1,351,181	-		Pf6N2E2_1153	0.31	-0.4
1,351,270	+		Pf6N2E2_1153	0.42	-1.0
1,351,270	+		Pf6N2E2_1153	0.42	+1.2
1,351,271	-		Pf6N2E2_1153	0.43	+0.6
1,351,355	-		Pf6N2E2_1153	0.53	-0.6
1,351,447	+		Pf6N2E2_1153	0.64	+1.1
1,351,507	+		Pf6N2E2_1153	0.71	-0.4
1,351,514	-		Pf6N2E2_1153	0.72	+0.9
1,351,718	+				-0.5
1,351,743	+				+0.7
1,351,743	+				-0.3
1,351,744	-				-0.6
1,351,744	-				-1.3
1,351,744	-				+0.3
1,351,744	-				+0.2
1,351,744	-				+0.7
1,351,747	+				-0.6
1,351,748	-				-0.7
1,351,815	-				+0.3
1,351,904	+		Pf6N2E2_1154	0.15	+0.3
1,351,905	-		Pf6N2E2_1154	0.15	+0.4