Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS27010

Experiment: Growth at pH9 and (C) Trisodium citrate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Growth at pH9 and (C) Trisodium citrate
6,026,022	+		PFLU_RS27000	0.86	+1.0
6,026,022	+		PFLU_RS27000	0.86	+1.2
6,026,022	+		PFLU_RS27000	0.86	-1.6
6,026,022	+		PFLU_RS27000	0.86	+3.6
6,026,022	+		PFLU_RS27000	0.86	+0.0
6,026,022	+		PFLU_RS27000	0.86	+2.2
6,026,022	+		PFLU_RS27000	0.86	-0.2
6,026,022	+		PFLU_RS27000	0.86	-0.9
6,026,022	+		PFLU_RS27000	0.86	+0.9
6,026,022	+		PFLU_RS27000	0.86	+0.2
6,026,022	+		PFLU_RS27000	0.86	+1.8
6,026,022	+		PFLU_RS27000	0.86	+3.4
6,026,022	+		PFLU_RS27000	0.86	-1.3
6,026,022	+		PFLU_RS27000	0.86	-1.2
6,026,022	+		PFLU_RS27000	0.86	+0.3
6,026,022	+		PFLU_RS27000	0.86	+2.2
6,026,022	+		PFLU_RS27000	0.86	+0.7
6,026,022	+		PFLU_RS27000	0.86	-0.9
6,026,022	+		PFLU_RS27000	0.86	+1.9
6,026,022	+		PFLU_RS27000	0.86	+0.9
6,026,022	+		PFLU_RS27000	0.86	-1.0
6,026,022	+		PFLU_RS27000	0.86	-1.7
6,026,022	+		PFLU_RS27000	0.86	-0.9
6,026,022	+		PFLU_RS27000	0.86	+0.7
6,026,022	+		PFLU_RS27000	0.86	+3.2
6,026,022	+		PFLU_RS27000	0.86	-2.3
6,026,022	+		PFLU_RS27000	0.86	+0.5
6,026,022	+		PFLU_RS27000	0.86	-1.7
6,026,022	+		PFLU_RS27000	0.86	-0.9
6,026,022	+		PFLU_RS27000	0.86	+2.1
6,026,022	+		PFLU_RS27000	0.86	-0.8
6,026,022	+		PFLU_RS27000	0.86	-0.1
6,026,022	+		PFLU_RS27000	0.86	+2.1
6,026,022	+		PFLU_RS27000	0.86	-0.6
6,026,022	+		PFLU_RS27000	0.86	-0.9
6,026,022	+		PFLU_RS27000	0.86	+0.8
6,026,023	-		PFLU_RS27000	0.86	-1.5
6,026,023	-		PFLU_RS27000	0.86	-0.2
6,026,023	-		PFLU_RS27000	0.86	+1.9
6,026,023	-		PFLU_RS27000	0.86	-0.5
6,026,023	-		PFLU_RS27000	0.86	-0.1
6,026,023	-		PFLU_RS27000	0.86	-1.2
6,026,023	-		PFLU_RS27000	0.86	-0.2
6,026,023	-		PFLU_RS27000	0.86	-1.0
6,026,023	-		PFLU_RS27000	0.86	-0.3
6,026,023	-		PFLU_RS27000	0.86	-2.0
6,026,023	-		PFLU_RS27000	0.86	-0.5
6,026,023	-		PFLU_RS27000	0.86	+0.2
6,026,023	-		PFLU_RS27000	0.86	-0.6
6,026,023	-		PFLU_RS27000	0.86	+2.8
6,026,023	-		PFLU_RS27000	0.86	-0.6
6,026,023	-		PFLU_RS27000	0.86	+2.6
6,026,023	-		PFLU_RS27000	0.86	-0.5
6,026,023	-		PFLU_RS27000	0.86	+1.3
6,026,023	-		PFLU_RS27000	0.86	+0.2
6,026,023	-		PFLU_RS27000	0.86	+2.1
6,026,023	-		PFLU_RS27000	0.86	+1.1
6,026,023	-		PFLU_RS27000	0.86	-1.5
6,026,023	-		PFLU_RS27000	0.86	-0.3
6,026,023	-		PFLU_RS27000	0.86	-1.4
6,026,023	-		PFLU_RS27000	0.86	-0.1
6,026,023	-		PFLU_RS27000	0.86	-0.6
6,026,023	-		PFLU_RS27000	0.86	-1.2
6,026,023	-		PFLU_RS27000	0.86	+2.0
6,026,023	-		PFLU_RS27000	0.86	+0.2
6,026,023	-		PFLU_RS27000	0.86	+1.7
6,026,023	-		PFLU_RS27000	0.86	-1.4
6,026,024	+		PFLU_RS27000	0.86	-1.4
6,026,024	+		PFLU_RS27000	0.86	+0.3
6,026,024	+		PFLU_RS27000	0.86	-0.6
6,026,024	+		PFLU_RS27000	0.86	-2.2
6,026,024	+		PFLU_RS27000	0.86	-0.3
6,026,024	+		PFLU_RS27000	0.86	-1.3
6,026,024	+		PFLU_RS27000	0.86	+0.2
6,026,024	+		PFLU_RS27000	0.86	-0.3
6,026,024	+		PFLU_RS27000	0.86	-1.3
6,026,025	-		PFLU_RS27000	0.87	+0.9
6,026,025	-		PFLU_RS27000	0.87	-2.2
6,026,025	-		PFLU_RS27000	0.87	+3.5
6,026,025	-		PFLU_RS27000	0.87	-0.3
6,026,025	-		PFLU_RS27000	0.87	+3.1
6,026,025	-		PFLU_RS27000	0.87	-1.0
6,026,025	-		PFLU_RS27000	0.87	+3.0
6,026,025	-		PFLU_RS27000	0.87	+0.8
6,026,025	-		PFLU_RS27000	0.87	-0.6
6,026,025	-		PFLU_RS27000	0.87	-1.8
6,026,025	-		PFLU_RS27000	0.87	+3.3
6,026,073	+				-0.4
6,026,073	+				+0.4
6,026,073	+				+0.5
6,026,073	+				-1.3
6,026,073	+				+1.4
6,026,074	-				+0.6
6,026,074	-				+1.2
6,026,074	-				-1.1
6,026,074	-				-1.4
6,026,074	-				-1.0
6,026,074	-				-0.4
6,026,119	+				+2.1
6,026,119	+				-0.8
6,026,120	-				-2.4
6,026,120	-				+1.4
6,026,120	-				-2.0
6,026,120	-				-0.3
6,026,163	+				-2.5
6,026,163	+				+3.6
6,026,164	-				-1.4
6,026,164	-				+2.1
6,026,164	-				+0.2
6,026,164	-				+2.8
6,026,212	+		PFLU_RS27005	0.12	-0.4
6,026,212	+		PFLU_RS27005	0.12	+2.1
6,026,212	+		PFLU_RS27005	0.12	+4.4
6,026,212	+		PFLU_RS27005	0.12	+0.9
6,026,212	+		PFLU_RS27005	0.12	-2.2
6,026,212	+		PFLU_RS27005	0.12	+1.5
6,026,212	+		PFLU_RS27005	0.12	+4.5
6,026,213	-		PFLU_RS27005	0.12	-2.1
6,026,213	-		PFLU_RS27005	0.12	+0.6
6,026,213	-		PFLU_RS27005	0.12	-0.1
6,026,213	-		PFLU_RS27005	0.12	+1.1
6,026,213	-		PFLU_RS27005	0.12	-0.5
6,026,213	-		PFLU_RS27005	0.12	+0.5
6,026,213	-		PFLU_RS27005	0.12	-1.6
6,026,213	-		PFLU_RS27005	0.12	+0.2
6,026,213	-		PFLU_RS27005	0.12	-0.3
6,026,213	-		PFLU_RS27005	0.12	-0.8
6,026,268	+		PFLU_RS27005	0.19	+0.0
6,026,268	+		PFLU_RS27005	0.19	+1.2
6,026,269	-		PFLU_RS27005	0.19	+2.6
6,026,269	-		PFLU_RS27005	0.19	+0.0
6,026,269	-		PFLU_RS27005	0.19	+2.1
6,026,269	-		PFLU_RS27005	0.19	+0.7
6,026,326	+		PFLU_RS27005	0.27	+1.4
6,026,326	+		PFLU_RS27005	0.27	-0.2
6,026,326	+		PFLU_RS27005	0.27	+0.9
6,026,326	+		PFLU_RS27005	0.27	+0.5
6,026,326	+		PFLU_RS27005	0.27	-1.6
6,026,326	+		PFLU_RS27005	0.27	+1.0
6,026,326	+		PFLU_RS27005	0.27	-0.4
6,026,326	+		PFLU_RS27005	0.27	-1.9
6,026,327	-		PFLU_RS27005	0.27	-1.8
6,026,327	-		PFLU_RS27005	0.27	-1.0
6,026,327	-		PFLU_RS27005	0.27	+3.0
6,026,327	-		PFLU_RS27005	0.27	+4.2
6,026,327	-		PFLU_RS27005	0.27	-1.4
6,026,377	+		PFLU_RS27005	0.34	-1.0
6,026,377	+		PFLU_RS27005	0.34	+0.5
6,026,377	+		PFLU_RS27005	0.34	+0.0
6,026,377	+		PFLU_RS27005	0.34	+2.7
6,026,377	+		PFLU_RS27005	0.34	-1.6
6,026,377	+		PFLU_RS27005	0.34	+1.5
6,026,377	+		PFLU_RS27005	0.34	-2.7
6,026,377	+		PFLU_RS27005	0.34	-0.4
6,026,377	+		PFLU_RS27005	0.34	+0.6
6,026,377	+		PFLU_RS27005	0.34	+3.2
6,026,378	-		PFLU_RS27005	0.34	-2.3
6,026,378	-		PFLU_RS27005	0.34	+1.7
6,026,378	-		PFLU_RS27005	0.34	+2.6
6,026,378	-		PFLU_RS27005	0.34	+3.3
6,026,378	-		PFLU_RS27005	0.34	-1.5
6,026,378	-		PFLU_RS27005	0.34	-2.1
6,026,378	-		PFLU_RS27005	0.34	+0.9
6,026,380	+		PFLU_RS27005	0.34	-1.0
6,026,380	+		PFLU_RS27005	0.34	-1.0
6,026,380	+		PFLU_RS27005	0.34	-0.9
6,026,380	+		PFLU_RS27005	0.34	+2.0
6,026,381	-		PFLU_RS27005	0.34	-0.3
6,026,381	-		PFLU_RS27005	0.34	-0.1
6,026,381	-		PFLU_RS27005	0.34	-2.3
6,026,549	-		PFLU_RS27005	0.56	-1.1
6,026,549	-		PFLU_RS27005	0.56	+1.2
6,026,670	-		PFLU_RS27005	0.72	+0.8
6,026,860	+				+3.0
6,026,860	+				-0.3
6,026,861	-				+2.4
6,026,861	-				+1.5
6,026,861	-				+0.0
6,026,861	-				-0.5
6,026,861	-				+2.0
6,026,861	-				+1.7
6,026,861	-				+0.3
6,026,918	+				+1.4
6,026,918	+				+1.2
6,026,918	+				-1.7
6,026,919	-				+1.3
6,026,919	-				-0.7
6,026,919	-				+3.9
6,026,919	-				+0.8
6,026,989	+				+1.6
6,026,989	+				-0.8
6,026,989	+				-1.3
6,026,989	+				-0.0
6,026,990	-				+0.2
6,026,990	-				+0.9
6,026,990	-				+1.0
6,026,990	-				+0.0
6,026,990	-				+0.1
6,026,990	-				+1.8
6,026,990	-				+0.8
6,026,990	-				-1.7
6,026,990	-				+1.8
6,026,990	-				+2.7
6,027,115	-		PFLU_RS27010	0.17	+5.1
6,027,115	-		PFLU_RS27010	0.17	-0.6
6,027,133	-		PFLU_RS27010	0.19	-1.9
6,027,133	-		PFLU_RS27010	0.19	+1.7
6,027,163	+		PFLU_RS27010	0.23	-1.0
6,027,201	+		PFLU_RS27010	0.28	-1.5
6,027,201	+		PFLU_RS27010	0.28	-1.2
6,027,202	-		PFLU_RS27010	0.28	+0.9
6,027,202	-		PFLU_RS27010	0.28	-2.0
6,027,209	+		PFLU_RS27010	0.29	-1.0
6,027,209	+		PFLU_RS27010	0.29	+0.0
6,027,209	+		PFLU_RS27010	0.29	+3.4
6,027,210	-		PFLU_RS27010	0.29	-1.0
6,027,210	-		PFLU_RS27010	0.29	+4.6
6,027,210	-		PFLU_RS27010	0.29	-1.0
6,027,292	+		PFLU_RS27010	0.40	+1.2
6,027,292	+		PFLU_RS27010	0.40	+1.0
6,027,292	+		PFLU_RS27010	0.40	-1.3
6,027,292	+		PFLU_RS27010	0.40	+0.2
6,027,293	-		PFLU_RS27010	0.40	-1.3
6,027,293	-		PFLU_RS27010	0.40	-0.8
6,027,293	-		PFLU_RS27010	0.40	+2.9
6,027,293	-		PFLU_RS27010	0.40	+0.0
6,027,293	-		PFLU_RS27010	0.40	-1.0
6,027,293	-		PFLU_RS27010	0.40	+0.1
6,027,293	-		PFLU_RS27010	0.40	-0.9
6,027,293	-		PFLU_RS27010	0.40	+1.8
6,027,293	-		PFLU_RS27010	0.40	-2.1
6,027,293	-		PFLU_RS27010	0.40	+1.4
6,027,306	+		PFLU_RS27010	0.42	+5.2
6,027,307	-		PFLU_RS27010	0.42	+2.7
6,027,307	-		PFLU_RS27010	0.42	+1.2
6,027,390	-		PFLU_RS27010	0.53	-1.4
6,027,488	+		PFLU_RS27010	0.66	+3.4
6,027,488	+		PFLU_RS27010	0.66	+2.7
6,027,488	+		PFLU_RS27010	0.66	+0.0
6,027,489	-		PFLU_RS27010	0.66	-0.3
6,027,489	-		PFLU_RS27010	0.66	+1.0
6,027,496	+		PFLU_RS27010	0.67	+1.0
6,027,496	+		PFLU_RS27010	0.67	+0.3
6,027,496	+		PFLU_RS27010	0.67	-1.8
6,027,496	+		PFLU_RS27010	0.67	-1.9
6,027,497	-		PFLU_RS27010	0.67	+0.7
6,027,497	-		PFLU_RS27010	0.67	-1.5
6,027,497	-		PFLU_RS27010	0.67	-2.0
6,027,497	-		PFLU_RS27010	0.67	+1.7
6,027,531	+		PFLU_RS27010	0.72	+1.4
6,027,531	+		PFLU_RS27010	0.72	-1.4
6,027,531	+		PFLU_RS27010	0.72	-0.1
6,027,531	+		PFLU_RS27010	0.72	+0.4
6,027,531	+		PFLU_RS27010	0.72	-1.0
6,027,531	+		PFLU_RS27010	0.72	-0.8
6,027,531	+		PFLU_RS27010	0.72	+3.4
6,027,531	+		PFLU_RS27010	0.72	+1.5
6,027,531	+		PFLU_RS27010	0.72	-1.0
6,027,531	+		PFLU_RS27010	0.72	-1.6
6,027,532	-		PFLU_RS27010	0.72	+1.2
6,027,532	-		PFLU_RS27010	0.72	-1.3
6,027,532	-		PFLU_RS27010	0.72	-1.0
6,027,532	-		PFLU_RS27010	0.72	+0.8
6,027,532	-		PFLU_RS27010	0.72	+1.6
6,027,532	-		PFLU_RS27010	0.72	-1.5
6,027,532	-		PFLU_RS27010	0.72	+3.6
6,027,601	-		PFLU_RS27010	0.81	-2.6
6,027,601	-		PFLU_RS27010	0.81	-0.2
6,027,601	-		PFLU_RS27010	0.81	+1.8
6,027,601	-		PFLU_RS27010	0.81	-0.3
6,027,601	-		PFLU_RS27010	0.81	+2.6
6,027,601	-		PFLU_RS27010	0.81	+1.5
6,027,625	+		PFLU_RS27010	0.84	-0.6
6,027,625	+		PFLU_RS27010	0.84	+0.0
6,027,625	+		PFLU_RS27010	0.84	-1.9
6,027,625	+		PFLU_RS27010	0.84	+0.2
6,027,625	+		PFLU_RS27010	0.84	-0.6
6,027,625	+		PFLU_RS27010	0.84	+0.6
6,027,632	+		PFLU_RS27010	0.85	+2.2
6,027,632	+		PFLU_RS27010	0.85	-0.2
6,027,632	+		PFLU_RS27010	0.85	+2.5
6,027,633	-		PFLU_RS27010	0.85	-0.2
6,027,633	-		PFLU_RS27010	0.85	+0.1
6,027,633	-		PFLU_RS27010	0.85	-1.6
6,027,633	-		PFLU_RS27010	0.85	-0.3
6,027,653	-		PFLU_RS27010	0.88	+4.8
6,027,653	-		PFLU_RS27010	0.88	-1.3
6,027,674	+				+2.6
6,027,674	+				+0.2
6,027,675	-				-0.8
6,027,675	-				+1.1
6,027,685	-				+2.3
6,027,685	-				+0.4
6,027,708	+				-1.8
6,027,708	+				-0.8
6,027,709	-				+1.7
6,027,709	-				+0.1
6,027,709	-				-1.3
6,027,731	+				-1.1
6,027,731	+				+0.9
6,027,732	-				-0.8
6,027,735	+				-0.8
6,027,735	+				+1.0
6,027,735	+				-0.9
6,027,735	+				-1.7
6,027,735	+				-2.1
6,027,735	+				-0.3
6,027,735	+				-1.5
6,027,736	-				-1.6
6,027,736	-				+0.0
6,027,750	+				+2.4
6,027,750	+				-0.1
6,027,750	+				+2.1
6,027,750	+				-1.1
6,027,750	+				-1.1
6,027,750	+				+0.2
6,027,751	-				+4.1
6,027,751	-				+2.7
6,027,751	-				+1.3
6,027,751	-				-1.1
6,027,754	+				-0.8
6,027,754	+				+0.5
6,027,754	+				+2.5
6,027,754	+				+3.8
6,027,754	+				-2.2
6,027,754	+				+1.7
6,027,754	+				+1.9
6,027,755	-				-0.3
6,027,755	-				-0.2
6,027,755	-				+1.3
6,027,775	+				+0.5
6,027,775	+				+2.6
6,027,775	+				-2.0
6,027,775	+				-0.3
6,027,775	+				-1.9
6,027,775	+				-1.6
6,027,775	+				+1.8
6,027,775	+				-0.7
6,027,776	-				+3.5
6,027,776	-				+1.8
6,027,776	-				-1.8
6,027,776	-				+0.1
6,027,776	-				-0.3
6,027,776	-				-1.0
6,027,776	-				+3.0
6,027,776	-				+3.6
6,027,776	-				-0.9
6,027,776	-				-0.6
6,027,776	-				+3.6
6,027,776	-				+4.3
6,027,776	-				+0.8
6,027,776	-				-0.2
6,027,776	-				-1.6
6,027,801	+				+1.7
6,027,801	+				+0.6
6,027,801	+				+3.3
6,027,801	+				+2.3
6,027,801	+				-1.3
6,027,801	+				-1.2
6,027,801	+				+0.1
6,027,802	-				-0.2
6,027,802	-				+0.7
6,027,802	-				-1.4
6,027,802	-				-0.3
6,027,802	-				-1.2
6,027,802	-				-1.3
6,027,802	-				-1.0
6,027,802	-				-0.3
6,027,802	-				-0.2
6,027,802	-				-1.0
6,027,827	+				+1.5
6,027,827	+				-0.6
6,027,828	-				+2.1
6,027,863	+				-0.8
6,027,863	+				-0.2
6,027,864	-				-2.1
6,027,864	-				-1.3
6,027,892	+				+1.1
6,027,892	+				+0.2
6,027,892	+				+1.8
6,027,893	-				+0.3
6,027,893	-				+2.6
6,027,893	-				+0.7
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6,027,917	+				+0.0
6,027,917	+				+2.4
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6,027,917	+				-0.5
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6,027,918	-				-0.9
6,027,918	-				+2.8
6,027,918	-				+1.8
6,028,502	-				+3.8
6,028,524	-				+0.2
6,028,524	-				-0.1
6,028,524	-				-1.4
6,028,524	-				+0.0
6,028,524	-				-0.8
6,028,524	-				+0.2
6,028,524	-				-0.1
6,028,524	-				-1.7
6,028,524	-				+4.1
6,028,524	-				+0.4
6,028,568	-				-0.2
6,028,589	-		PFLU_RS27020	0.11	-0.4
6,028,647	-		PFLU_RS27020	0.15	+3.0
6,028,647	-		PFLU_RS27020	0.15	-0.6
6,028,647	-		PFLU_RS27020	0.15	-2.0
6,028,647	-		PFLU_RS27020	0.15	+1.0
6,028,647	-		PFLU_RS27020	0.15	+0.5
6,028,647	-		PFLU_RS27020	0.15	-0.2
6,028,647	-		PFLU_RS27020	0.15	-0.9
6,028,666	-		PFLU_RS27020	0.16	+2.5
6,028,666	-		PFLU_RS27020	0.16	-0.5
6,028,666	-		PFLU_RS27020	0.16	+0.0
6,028,666	-		PFLU_RS27020	0.16	-0.1
6,028,666	-		PFLU_RS27020	0.16	-0.9