Experiment: L-Glutamine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_2242 and Ga0059261_2243 are separated by 89 nucleotides Ga0059261_2243 and Ga0059261_2244 are separated by 97 nucleotides
Ga0059261_2242: Ga0059261_2242 - phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase, at 2,342,812 to 2,344,383
_2242
Ga0059261_2243: Ga0059261_2243 - Membrane protein involved in the export of O-antigen and teichoic acid, at 2,344,473 to 2,345,990
_2243
Ga0059261_2244: Ga0059261_2244 - DNA polymerase I (EC 2.7.7.7), at 2,346,088 to 2,348,853
_2244
Position (kb)
2344
2345
2346 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2343.481 kb on + strand at 2344.398 kb on + strand at 2344.398 kb on + strand at 2344.398 kb on + strand at 2344.399 kb on - strand at 2344.399 kb on - strand at 2344.399 kb on - strand at 2344.522 kb on - strand at 2344.558 kb on + strand at 2344.559 kb on - strand at 2344.559 kb on - strand at 2344.786 kb on + strand, within Ga0059261_2243 at 2344.787 kb on - strand, within Ga0059261_2243 at 2344.836 kb on + strand, within Ga0059261_2243 at 2344.897 kb on + strand, within Ga0059261_2243 at 2344.898 kb on + strand at 2345.203 kb on + strand, within Ga0059261_2243 at 2345.203 kb on + strand, within Ga0059261_2243 at 2345.207 kb on - strand, within Ga0059261_2243 at 2345.207 kb on - strand, within Ga0059261_2243 at 2345.459 kb on - strand at 2345.633 kb on - strand, within Ga0059261_2243 at 2345.633 kb on - strand, within Ga0059261_2243 at 2345.633 kb on - strand, within Ga0059261_2243 at 2346.079 kb on + strand at 2346.079 kb on + strand at 2346.079 kb on + strand at 2346.080 kb on - strand at 2346.080 kb on - strand at 2346.447 kb on + strand, within Ga0059261_2244 at 2346.448 kb on - strand, within Ga0059261_2244 at 2346.450 kb on - strand, within Ga0059261_2244 at 2346.488 kb on + strand, within Ga0059261_2244 at 2346.593 kb on + strand, within Ga0059261_2244 at 2346.593 kb on + strand, within Ga0059261_2244 at 2346.761 kb on + strand, within Ga0059261_2244 at 2346.902 kb on + strand, within Ga0059261_2244 at 2346.902 kb on + strand, within Ga0059261_2244 at 2346.902 kb on + strand, within Ga0059261_2244 at 2346.902 kb on + strand, within Ga0059261_2244 at 2346.902 kb on + strand, within Ga0059261_2244 at 2346.903 kb on - strand, within Ga0059261_2244 at 2346.903 kb on - strand, within Ga0059261_2244 at 2346.910 kb on - strand, within Ga0059261_2244 at 2346.910 kb on - strand, within Ga0059261_2244 at 2346.957 kb on + strand, within Ga0059261_2244 at 2346.958 kb on - strand, within Ga0059261_2244 at 2346.959 kb on + strand, within Ga0059261_2244 at 2346.959 kb on + strand, within Ga0059261_2244 at 2346.959 kb on + strand, within Ga0059261_2244 at 2346.959 kb on + strand, within Ga0059261_2244 at 2346.959 kb on + strand, within Ga0059261_2244 at 2346.959 kb on + strand, within Ga0059261_2244 at 2346.959 kb on + strand, within Ga0059261_2244 at 2346.960 kb on - strand, within Ga0059261_2244 at 2346.960 kb on - strand, within Ga0059261_2244 at 2346.960 kb on - strand, within Ga0059261_2244 at 2346.960 kb on - strand, within Ga0059261_2244 at 2346.960 kb on - strand, within Ga0059261_2244 at 2346.960 kb on - strand, within Ga0059261_2244 at 2346.960 kb on - strand, within Ga0059261_2244
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (C) remove 2,343,481 + +1.7 2,344,398 + -0.9 2,344,398 + +0.0 2,344,398 + -0.7 2,344,399 - +0.4 2,344,399 - +1.5 2,344,399 - +0.9 2,344,522 - -1.0 2,344,558 + -1.3 2,344,559 - -1.6 2,344,559 - -0.1 2,344,786 + Ga0059261_2243 0.21 -1.4 2,344,787 - Ga0059261_2243 0.21 -0.9 2,344,836 + Ga0059261_2243 0.24 -2.5 2,344,897 + Ga0059261_2243 0.28 -0.9 2,344,898 + -1.3 2,345,203 + Ga0059261_2243 0.48 -1.1 2,345,203 + Ga0059261_2243 0.48 -1.7 2,345,207 - Ga0059261_2243 0.48 +1.7 2,345,207 - Ga0059261_2243 0.48 -0.6 2,345,459 - +1.7 2,345,633 - Ga0059261_2243 0.76 -1.1 2,345,633 - Ga0059261_2243 0.76 -2.2 2,345,633 - Ga0059261_2243 0.76 -1.7 2,346,079 + -1.3 2,346,079 + -3.3 2,346,079 + -2.7 2,346,080 - -0.7 2,346,080 - -0.1 2,346,447 + Ga0059261_2244 0.13 -0.2 2,346,448 - Ga0059261_2244 0.13 +0.2 2,346,450 - Ga0059261_2244 0.13 -0.4 2,346,488 + Ga0059261_2244 0.14 -2.1 2,346,593 + Ga0059261_2244 0.18 +0.5 2,346,593 + Ga0059261_2244 0.18 -1.7 2,346,761 + Ga0059261_2244 0.24 -1.9 2,346,902 + Ga0059261_2244 0.29 -1.1 2,346,902 + Ga0059261_2244 0.29 -1.9 2,346,902 + Ga0059261_2244 0.29 -0.2 2,346,902 + Ga0059261_2244 0.29 -2.7 2,346,902 + Ga0059261_2244 0.29 -3.5 2,346,903 - Ga0059261_2244 0.29 -1.1 2,346,903 - Ga0059261_2244 0.29 -0.9 2,346,910 - Ga0059261_2244 0.30 -1.6 2,346,910 - Ga0059261_2244 0.30 -1.1 2,346,957 + Ga0059261_2244 0.31 -1.8 2,346,958 - Ga0059261_2244 0.31 -0.6 2,346,959 + Ga0059261_2244 0.31 -2.1 2,346,959 + Ga0059261_2244 0.31 -3.2 2,346,959 + Ga0059261_2244 0.31 -2.3 2,346,959 + Ga0059261_2244 0.31 -1.3 2,346,959 + Ga0059261_2244 0.31 -2.3 2,346,959 + Ga0059261_2244 0.31 -1.4 2,346,959 + Ga0059261_2244 0.31 -1.6 2,346,960 - Ga0059261_2244 0.32 -1.4 2,346,960 - Ga0059261_2244 0.32 -1.4 2,346,960 - Ga0059261_2244 0.32 -0.0 2,346,960 - Ga0059261_2244 0.32 -1.4 2,346,960 - Ga0059261_2244 0.32 -0.1 2,346,960 - Ga0059261_2244 0.32 -2.7 2,346,960 - Ga0059261_2244 0.32 -2.9
Or see this region's nucleotide sequence