Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03282

Experiment: PYE with Spectinomycin 0.08 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Spectinomycin 0.08 mg/ml
3,450,820	-				+1.6
3,450,845	+				-0.0
3,450,853	-				+1.3
3,450,863	-				+1.4
3,450,981	+				+0.1
3,450,988	-				+1.9
3,450,988	-				+1.9
3,450,988	-				+1.0
3,451,002	+				+1.5
3,451,141	+		CCNA_03281	0.11	+2.9
3,451,146	+		CCNA_03281	0.12	+2.1
3,451,151	+		CCNA_03281	0.13	+2.7
3,451,162	+		CCNA_03281	0.15	+3.0
3,451,166	+		CCNA_03281	0.16	+2.3
3,451,173	+		CCNA_03281	0.17	+2.4
3,451,173	+		CCNA_03281	0.17	+2.6
3,451,174	+		CCNA_03281	0.18	+2.4
3,451,179	+		CCNA_03281	0.19	+1.8
3,451,192	+		CCNA_03281	0.21	+2.2
3,451,231	+		CCNA_03281	0.29	+2.7
3,451,254	+		CCNA_03281	0.34	+2.2
3,451,270	+		CCNA_03281	0.37	+2.2
3,451,282	+		CCNA_03281	0.39	+2.8
3,451,282	+		CCNA_03281	0.39	+2.0
3,451,282	+		CCNA_03281	0.39	+2.2
3,451,290	+		CCNA_03281	0.41	+2.4
3,451,292	+		CCNA_03281	0.41	+2.4
3,451,292	+		CCNA_03281	0.41	+2.2
3,451,300	+		CCNA_03281	0.43	+2.4
3,451,331	+		CCNA_03281	0.49	+1.1
3,451,338	-		CCNA_03281	0.51	-0.8
3,451,339	+		CCNA_03281	0.51	+1.3
3,451,339	+		CCNA_03281	0.51	+2.6
3,451,371	+		CCNA_03281	0.57	+3.0
3,451,441	+		CCNA_03281	0.71	+2.6
3,451,441	+		CCNA_03281	0.71	+2.7
3,451,521	+		CCNA_03281	0.87	+3.2
3,451,529	+		CCNA_03281	0.89	+2.4
3,451,529	+		CCNA_03281	0.89	+2.7
3,451,553	+				+1.1
3,451,553	+				+1.2
3,451,558	+				+0.0
3,451,585	-				+0.4
3,451,620	-				-0.9
3,451,651	-				-1.2
3,451,684	+				-0.9
3,451,684	+				+0.1
3,451,692	-				-0.8
3,451,692	-				+0.2
3,451,754	+				-0.5
3,451,771	+				-0.6
3,451,771	+				-0.0
3,451,776	+				-0.2
3,451,779	-				-0.1
3,451,779	-				-0.9
3,451,779	-				+0.4
3,451,846	+				-1.2
3,451,867	+				-0.4
3,451,882	+				-0.6
3,451,882	+				+1.2
3,451,903	-		CCNA_03282	0.12	-0.5
3,451,903	-		CCNA_03282	0.12	+0.7
3,451,915	+		CCNA_03282	0.13	-1.4
3,451,937	-				+1.4
3,451,949	-		CCNA_03282	0.17	-0.2
3,451,961	-		CCNA_03282	0.18	-0.2
3,451,991	+		CCNA_03282	0.22	+0.3
3,451,991	+		CCNA_03282	0.22	-0.4
3,451,991	+		CCNA_03282	0.22	+0.6
3,451,991	+		CCNA_03282	0.22	-1.1
3,451,999	-		CCNA_03282	0.23	+1.0
3,451,999	-		CCNA_03282	0.23	+0.3
3,451,999	-		CCNA_03282	0.23	-1.0
3,451,999	-		CCNA_03282	0.23	-0.6
3,452,013	-		CCNA_03282	0.24	-0.8
3,452,016	+		CCNA_03282	0.25	+0.3
3,452,053	+		CCNA_03282	0.29	-1.4
3,452,070	-		CCNA_03282	0.31	-0.8
3,452,093	+		CCNA_03282	0.34	-0.6
3,452,093	+		CCNA_03282	0.34	-1.6
3,452,113	+		CCNA_03282	0.36	+0.4
3,452,120	+		CCNA_03282	0.37	-0.9
3,452,121	-		CCNA_03282	0.37	-0.4
3,452,121	-		CCNA_03282	0.37	+2.6
3,452,128	-		CCNA_03282	0.38	-1.3
3,452,153	+		CCNA_03282	0.40	-2.4
3,452,158	+		CCNA_03282	0.41	+0.1
3,452,158	+		CCNA_03282	0.41	-0.7
3,452,161	-		CCNA_03282	0.41	-0.5
3,452,166	-		CCNA_03282	0.42	-1.4
3,452,166	-		CCNA_03282	0.42	-1.9
3,452,166	-		CCNA_03282	0.42	-0.3
3,452,166	-		CCNA_03282	0.42	+1.2
3,452,166	-		CCNA_03282	0.42	+0.7
3,452,182	+		CCNA_03282	0.44	-0.9
3,452,200	+		CCNA_03282	0.46	+0.8
3,452,210	-		CCNA_03282	0.47	-0.7
3,452,323	+		CCNA_03282	0.60	+1.0
3,452,331	-		CCNA_03282	0.61	+1.4
3,452,472	+		CCNA_03282	0.77	-1.8
3,452,475	-		CCNA_03282	0.78	+2.2
3,452,482	+		CCNA_03282	0.78	-0.7
3,452,482	+		CCNA_03282	0.78	-0.3
3,452,482	+		CCNA_03282	0.78	+0.0
3,452,482	+		CCNA_03282	0.78	-0.3
3,452,482	+		CCNA_03282	0.78	-1.8
3,452,490	-		CCNA_03282	0.79	-1.9
3,452,490	-		CCNA_03282	0.79	+0.4
3,452,490	-		CCNA_03282	0.79	-2.2
3,452,490	-		CCNA_03282	0.79	-0.3
3,452,515	+		CCNA_03282	0.82	+0.4
3,452,585	+				-0.1
3,452,590	+				+0.9
3,452,590	+				-0.3
3,452,590	+				+1.4
3,452,590	+				-2.6
3,452,590	+				+0.9
3,452,590	+				+0.0
3,452,590	+				-0.9
3,452,590	+				+0.6
3,452,590	+				+0.9
3,452,590	+				+0.5
3,452,590	+				-0.5
3,452,590	+				+0.3
3,452,590	+				-0.9
3,452,598	-				+0.5
3,452,598	-				-1.1
3,452,598	-				-2.6
3,452,598	-				-2.3
3,452,598	-				+3.2
3,452,598	-				+1.4
3,452,598	-				+1.2
3,452,598	-				-0.5
3,452,598	-				-0.1
3,452,598	-				-0.7
3,452,598	-				+0.2
3,452,598	-				-0.1
3,452,598	-				+1.0
3,452,598	-				+0.3
3,452,598	-				-0.7
3,452,598	-				-1.5
3,452,598	-				+0.6
3,452,616	+				+1.2
3,452,631	+				-0.2
3,452,639	-				+0.5
3,452,647	+				+1.0
3,452,655	-				-0.3
3,452,699	+				+0.5
3,452,707	-				+1.6
3,452,723	-				-0.3
3,452,762	+				+0.4
3,452,762	+				-0.1
3,452,786	-				+0.3
3,452,793	+				-2.0
3,452,793	-				-1.0
3,452,847	-		CCNA_03283	0.14	+1.2
3,452,862	+		CCNA_03283	0.16	-2.1
3,452,892	+		CCNA_03283	0.19	-1.1
3,452,892	+		CCNA_03283	0.19	+1.6
3,452,911	-		CCNA_03283	0.20	-1.2
3,452,935	+		CCNA_03283	0.23	-1.0
3,452,964	+		CCNA_03283	0.26	+1.4
3,452,972	-		CCNA_03283	0.26	+0.8
3,452,972	-		CCNA_03283	0.26	-0.9
3,452,972	-		CCNA_03283	0.26	+0.1
3,452,982	+		CCNA_03283	0.27	+0.9
3,452,982	+		CCNA_03283	0.27	-0.2
3,452,982	+		CCNA_03283	0.27	+0.0
3,452,982	+		CCNA_03283	0.27	+0.9
3,452,982	+		CCNA_03283	0.27	+0.9
3,452,982	+		CCNA_03283	0.27	-0.7
3,452,982	+		CCNA_03283	0.27	-0.1
3,452,982	+		CCNA_03283	0.27	+0.4
3,452,982	+		CCNA_03283	0.27	-1.8
3,452,982	+		CCNA_03283	0.27	-1.0
3,452,982	+		CCNA_03283	0.27	+0.9
3,452,982	+		CCNA_03283	0.27	+0.6
3,452,987	+		CCNA_03283	0.28	-0.5
3,452,990	-		CCNA_03283	0.28	+0.0
3,452,990	-		CCNA_03283	0.28	-0.3
3,452,990	-		CCNA_03283	0.28	+1.0
3,452,990	-		CCNA_03283	0.28	-1.4
3,452,990	-		CCNA_03283	0.28	+1.0
3,452,995	-		CCNA_03283	0.29	+0.8
3,453,000	+		CCNA_03283	0.29	-0.9
3,453,000	+		CCNA_03283	0.29	-0.1
3,453,000	-		CCNA_03283	0.29	-0.9
3,453,008	-		CCNA_03283	0.30	+1.4
3,453,018	-		CCNA_03283	0.31	-0.2
3,453,036	-		CCNA_03283	0.33	-0.6
3,453,041	-		CCNA_03283	0.33	+0.3
3,453,236	-		CCNA_03283	0.52	+1.2
3,453,276	+		CCNA_03283	0.56	+0.2
3,453,312	+		CCNA_03283	0.60	-1.2
3,453,312	+		CCNA_03283	0.60	+0.7
3,453,312	+		CCNA_03283	0.60	-0.1
3,453,322	+		CCNA_03283	0.61	+2.2
3,453,322	+		CCNA_03283	0.61	-1.1
3,453,330	-		CCNA_03283	0.62	+0.8
3,453,330	-		CCNA_03283	0.62	-1.8
3,453,330	-		CCNA_03283	0.62	+1.4
3,453,333	+		CCNA_03283	0.62	+0.2
3,453,343	+		CCNA_03283	0.63	-0.5
3,453,345	-		CCNA_03283	0.63	-0.2
3,453,365	+				+3.2
3,453,389	-		CCNA_03283	0.67	+1.4
3,453,400	-		CCNA_03283	0.68	-0.9
3,453,400	-		CCNA_03283	0.68	-1.2
3,453,402	+		CCNA_03283	0.69	+0.7
3,453,402	+		CCNA_03283	0.69	+1.0
3,453,420	+		CCNA_03283	0.70	+0.1
3,453,440	+		CCNA_03283	0.72	+0.0
3,453,493	-		CCNA_03283	0.78	+1.4
3,453,509	+		CCNA_03283	0.79	+1.7
3,453,515	-		CCNA_03283	0.80	-0.0
3,453,534	+		CCNA_03283	0.82	-1.1
3,453,534	+		CCNA_03283	0.82	+0.2
3,453,558	-		CCNA_03283	0.84	-0.1
3,453,558	-		CCNA_03283	0.84	-0.1
3,453,567	+		CCNA_03283	0.85	-0.8
3,453,567	+		CCNA_03283	0.85	-0.1
3,453,575	-		CCNA_03283	0.86	+0.6
3,453,582	+		CCNA_03283	0.86	+0.7
3,453,590	-		CCNA_03283	0.87	-0.1
3,453,590	-		CCNA_03283	0.87	-0.5
3,453,605	+		CCNA_03283	0.89	+1.4
3,453,626	+				-0.7