Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02926

Experiment: PYE with Spectinomycin 0.08 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Spectinomycin 0.08 mg/ml
3,088,098	+				+2.7
3,088,190	+				+1.2
3,088,198	-				+1.0
3,088,208	-				-0.3
3,088,208	-				-0.5
3,088,224	+				-0.2
3,088,280	+				+1.2
3,088,280	+				+1.0
3,088,288	-				+0.5
3,088,301	+				+0.2
3,088,301	+				+1.0
3,088,301	+				+1.1
3,088,307	+				+0.3
3,088,309	-				+0.9
3,088,312	+				+1.4
3,088,320	-				+1.5
3,088,320	-				+1.8
3,088,324	+				+0.8
3,088,324	+				+1.2
3,088,324	+				+0.4
3,088,332	-				+3.0
3,088,332	-				-0.5
3,088,332	-				+0.7
3,088,344	+				+0.3
3,088,368	-				+2.3
3,088,368	-				-1.5
3,088,369	-				+0.0
3,088,389	+				+0.3
3,088,389	+				-1.6
3,088,405	+		CCNA_02926	0.16	+0.6
3,088,413	-		CCNA_02926	0.21	-1.6
3,088,434	-		CCNA_02926	0.33	+1.2
3,088,437	+		CCNA_02926	0.35	+1.6
3,088,466	-		CCNA_02926	0.52	+0.0
3,088,490	-		CCNA_02926	0.66	+0.4
3,088,490	-		CCNA_02926	0.66	+1.3
3,088,550	+				+0.3
3,088,558	-				-1.5
3,088,558	-				+0.7
3,088,602	-				-0.9
3,088,616	+				+0.1
3,088,616	+				+0.8
3,088,616	+				-0.0
3,088,616	+				-0.2
3,088,616	+				-0.3
3,088,616	+				-0.7
3,088,616	+				+0.0
3,088,616	+				+0.2
3,088,624	-				+1.3
3,088,624	-				+1.0
3,088,624	-				-0.8
3,088,624	-				-1.2
3,088,624	-				-0.6
3,088,624	-				-0.1
3,088,649	+				+0.1
3,088,649	+				-0.2
3,088,657	-				+1.1
3,088,659	+				+1.4
3,088,664	+				+0.9
3,088,672	-				-0.8
3,088,778	+		CCNA_02927	0.11	+1.5
3,088,778	+		CCNA_02927	0.11	-1.6
3,088,778	+		CCNA_02927	0.11	-1.5
3,088,786	-		CCNA_02927	0.12	-0.4
3,088,786	-		CCNA_02927	0.12	+0.3
3,088,786	-		CCNA_02927	0.12	-0.1
3,088,786	-		CCNA_02927	0.12	-2.0
3,088,811	+		CCNA_02927	0.16	-2.2
3,088,815	-		CCNA_02927	0.16	-0.3
3,088,844	-		CCNA_02927	0.20	+0.2
3,088,853	+		CCNA_02927	0.21	+0.3
3,088,853	+		CCNA_02927	0.21	-1.2
3,088,861	-		CCNA_02927	0.22	+0.4
3,088,873	+		CCNA_02927	0.24	-1.1
3,088,874	+		CCNA_02927	0.24	-0.3
3,088,874	+		CCNA_02927	0.24	-0.3
3,088,881	-		CCNA_02927	0.25	+1.4
3,088,882	-		CCNA_02927	0.25	-0.8
3,088,882	-		CCNA_02927	0.25	+0.6
3,088,919	+		CCNA_02927	0.30	+1.0
3,088,929	+		CCNA_02927	0.32	-0.3
3,088,929	+		CCNA_02927	0.32	+0.0
3,088,945	-				+1.7
3,088,953	-		CCNA_02927	0.35	+0.4
3,088,954	-		CCNA_02927	0.35	-0.8
3,088,954	-		CCNA_02927	0.35	+2.0
3,088,956	+		CCNA_02927	0.35	-0.5
3,088,959	-		CCNA_02927	0.36	+0.5
3,088,964	-		CCNA_02927	0.36	+0.9
3,088,970	-		CCNA_02927	0.37	-0.5
3,089,021	-		CCNA_02927	0.44	+0.6
3,089,036	+		CCNA_02927	0.46	+0.3
3,089,038	+		CCNA_02927	0.46	-0.4
3,089,044	-		CCNA_02927	0.47	+0.9
3,089,048	+		CCNA_02927	0.48	+0.4
3,089,051	-		CCNA_02927	0.48	+0.3
3,089,058	+		CCNA_02927	0.49	+0.9
3,089,080	+		CCNA_02927	0.52	-1.6
3,089,154	+		CCNA_02927	0.62	-1.2
3,089,154	+		CCNA_02927	0.62	+0.8
3,089,154	+		CCNA_02927	0.62	-0.7
3,089,154	+		CCNA_02927	0.62	-0.8
3,089,162	-		CCNA_02927	0.63	-0.6
3,089,186	+		CCNA_02927	0.66	+0.3
3,089,191	+		CCNA_02927	0.67	+0.4
3,089,191	+		CCNA_02927	0.67	+0.2
3,089,194	-		CCNA_02927	0.67	+0.3
3,089,199	-		CCNA_02927	0.68	-1.2
3,089,204	-		CCNA_02927	0.69	+0.0
3,089,204	-		CCNA_02927	0.69	+0.2
3,089,204	-		CCNA_02927	0.69	+2.0
3,089,228	+		CCNA_02927	0.72	+0.3
3,089,228	+		CCNA_02927	0.72	-0.6
3,089,228	-		CCNA_02927	0.72	-0.7
3,089,228	-		CCNA_02927	0.72	+1.5
3,089,244	+		CCNA_02927	0.74	+0.5
3,089,257	-		CCNA_02927	0.76	+0.4
3,089,268	-		CCNA_02927	0.78	-0.0
3,089,273	-		CCNA_02927	0.78	+0.2
3,089,278	-		CCNA_02927	0.79	+0.7
3,089,292	+		CCNA_02927	0.81	-1.4
3,089,293	+		CCNA_02927	0.81	+1.0
3,089,300	-		CCNA_02927	0.82	-1.4
3,089,324	+		CCNA_02927	0.85	-1.0
3,089,346	+		CCNA_02927	0.88	+0.5
3,089,346	+		CCNA_02927	0.88	-0.0
3,089,369	-				-1.6
3,089,391	-				-1.9
3,089,395	+				-1.5
3,089,410	-				-1.4
3,089,418	-				-1.1
3,089,502	+				+0.8