Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02153

Experiment: PYE with Spectinomycin 0.08 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Spectinomycin 0.08 mg/ml
2,308,245	-		CCNA_02151	0.19	+0.6
2,308,265	-		CCNA_02151	0.27	+0.5
2,308,280	-		CCNA_02151	0.33	+2.2
2,308,342	+		CCNA_02151	0.57	-1.4
2,308,345	-		CCNA_02151	0.58	+4.0
2,308,345	-		CCNA_02151	0.58	+3.8
2,308,345	-		CCNA_02151	0.58	+1.5
2,308,357	+		CCNA_02151	0.63	-0.2
2,308,385	-		CCNA_02151	0.74	+0.9
2,308,421	-		CCNA_02151	0.88	+0.9
2,308,448	-				+3.1
2,308,472	+				+0.9
2,308,478	-				-1.4
2,308,485	-				+0.5
2,308,507	+				-0.2
2,308,515	-				+0.1
2,308,668	-		CCNA_02152	0.18	+1.2
2,308,772	-		CCNA_02152	0.34	+0.2
2,308,788	-		CCNA_02152	0.36	-2.1
2,308,788	-		CCNA_02152	0.36	-0.1
2,308,877	-		CCNA_02152	0.50	-1.9
2,308,887	-		CCNA_02152	0.51	-0.3
2,308,952	+		CCNA_02152	0.61	+0.0
2,308,977	-		CCNA_02152	0.65	+0.3
2,309,000	-		CCNA_02152	0.68	+0.6
2,309,000	-		CCNA_02152	0.68	-1.1
2,309,010	-		CCNA_02152	0.70	+1.4
2,309,010	-		CCNA_02152	0.70	+0.1
2,309,010	-		CCNA_02152	0.70	-0.6
2,309,011	-		CCNA_02152	0.70	-2.0
2,309,046	-		CCNA_02152	0.75	-2.6
2,309,051	-		CCNA_02152	0.76	+0.3
2,309,066	-		CCNA_02152	0.78	-1.6
2,309,086	-		CCNA_02152	0.82	-0.7
2,309,102	+		CCNA_02152	0.84	-1.6
2,309,133	-		CCNA_02152	0.89	-1.7
2,309,133	-		CCNA_02152	0.89	-0.1
2,309,163	+				-0.4
2,309,191	-				+0.8
2,309,210	+				-1.1
2,309,212	+				+1.4
2,309,220	-				+0.1
2,309,228	-				-1.0
2,309,260	+				-1.4
2,309,268	-				+1.7
2,309,285	-				+0.1
2,309,289	+				-0.8
2,309,297	-		CCNA_02153	0.10	-0.8
2,309,315	-		CCNA_02153	0.12	+0.6
2,309,315	-		CCNA_02153	0.12	-0.6
2,309,323	+		CCNA_02153	0.13	+0.3
2,309,326	-		CCNA_02153	0.13	-1.7
2,309,356	+		CCNA_02153	0.17	+0.6
2,309,364	-		CCNA_02153	0.17	-1.4
2,309,422	+		CCNA_02153	0.24	-0.5
2,309,444	-		CCNA_02153	0.26	+0.7
2,309,535	-		CCNA_02153	0.36	+0.1
2,309,603	-		CCNA_02153	0.43	-0.3
2,309,610	+		CCNA_02153	0.44	+0.4
2,309,666	+		CCNA_02153	0.50	-2.1
2,309,666	+		CCNA_02153	0.50	-0.5
2,309,673	+		CCNA_02153	0.51	-0.5
2,309,673	+		CCNA_02153	0.51	+0.0
2,309,679	-		CCNA_02153	0.52	-0.8
2,309,681	-		CCNA_02153	0.52	-0.0
2,309,729	-		CCNA_02153	0.57	+1.4
2,309,734	-		CCNA_02153	0.58	+1.7
2,309,772	+		CCNA_02153	0.62	+0.2
2,309,788	+		CCNA_02153	0.63	-0.7
2,309,798	-		CCNA_02153	0.64	-2.2
2,309,867	+		CCNA_02153	0.72	+0.4
2,309,937	-		CCNA_02153	0.80	+0.6
2,309,960	-		CCNA_02153	0.82	-0.1
2,309,965	-		CCNA_02153	0.83	-2.0
2,309,970	+		CCNA_02153	0.83	+0.1
2,309,990	+		CCNA_02153	0.85	+0.4
2,310,002	+		CCNA_02153	0.87	-0.4
2,310,095	+				+1.2
2,310,103	-				+1.9
2,310,131	+				-1.7
2,310,131	+				-0.4
2,310,131	+				-0.6
2,310,131	+				-1.4
2,310,131	+				-2.1
2,310,131	+				-1.4
2,310,131	+				-0.4
2,310,131	+				+0.9
2,310,131	+				-0.4
2,310,131	+				-0.8
2,310,131	+				+0.0
2,310,131	+				+1.0
2,310,131	+				+0.4
2,310,139	-				-0.6
2,310,139	-				+0.6
2,310,139	-				+2.0
2,310,139	-				+1.3
2,310,139	-				+2.8
2,310,139	-				-1.6
2,310,139	-				-1.3
2,310,139	-				-0.7
2,310,139	-				-0.4
2,310,139	-				-0.8
2,310,139	-				+1.8
2,310,139	-				-1.4
2,310,139	-				+1.1
2,310,139	-				-0.3
2,310,139	-				-1.4
2,310,139	-				-0.3
2,310,139	-				-0.5
2,310,139	-				-1.1
2,310,139	-				+0.6
2,310,139	-				-0.1
2,310,139	-				+0.8
2,310,139	-				-0.4
2,310,139	-				+0.1
2,310,163	-				-0.6
2,310,182	+				-0.0
2,310,205	-		CCNA_02154	0.12	+0.3
2,310,207	-		CCNA_02154	0.12	+0.5
2,310,215	-		CCNA_02154	0.14	-0.4
2,310,230	-		CCNA_02154	0.17	+1.0
2,310,242	-		CCNA_02154	0.19	+0.7
2,310,249	-		CCNA_02154	0.20	-0.8
2,310,251	+				+1.7
2,310,259	-		CCNA_02154	0.22	-0.2
2,310,277	+		CCNA_02154	0.25	-1.2
2,310,284	+		CCNA_02154	0.27	-0.2
2,310,298	+		CCNA_02154	0.29	+0.4
2,310,326	-		CCNA_02154	0.34	+0.8
2,310,326	-		CCNA_02154	0.34	-0.7
2,310,340	-		CCNA_02154	0.37	+0.4
2,310,392	-		CCNA_02154	0.47	+0.2
2,310,419	+		CCNA_02154	0.52	-0.4
2,310,426	+		CCNA_02154	0.53	+0.8
2,310,487	+		CCNA_02154	0.64	+0.1
2,310,487	+		CCNA_02154	0.64	-1.4
2,310,505	-		CCNA_02154	0.68	-0.3
2,310,507	+		CCNA_02154	0.68	+0.6
2,310,507	+		CCNA_02154	0.68	-1.3
2,310,515	-		CCNA_02154	0.70	-0.2
2,310,559	+		CCNA_02154	0.78	-0.5
2,310,568	+		CCNA_02154	0.80	+0.2
2,310,569	+		CCNA_02154	0.80	+1.0
2,310,594	+		CCNA_02154	0.84	+1.6
2,310,655	+				-0.2
2,310,681	+				+0.3
2,310,681	+				+0.2
2,310,699	+				-0.7
2,310,714	+				-0.6
2,310,722	-				-0.7
2,310,728	+				-0.8
2,310,728	+				-0.7
2,310,733	+				-1.2
2,310,736	-				-1.6
2,310,736	-				-1.7
2,310,736	-				-1.1
2,310,770	+				+1.2
2,310,770	+				-0.4
2,310,873	+				+0.3
2,310,878	+				-0.6
2,310,895	+				-0.3
2,310,903	-				-0.4
2,310,922	-				-1.7
2,310,922	-				-1.3
2,310,937	-				+0.3
2,310,937	-				+0.6
2,310,992	-		CCNA_02155	0.12	-1.1
2,311,014	-		CCNA_02155	0.14	-0.3
2,311,021	+		CCNA_02155	0.15	-1.2
2,311,047	+		CCNA_02155	0.17	-0.7
2,311,048	-		CCNA_02155	0.17	-0.3
2,311,056	-		CCNA_02155	0.18	-0.3
2,311,066	-		CCNA_02155	0.19	+0.2
2,311,105	-		CCNA_02155	0.22	+0.7