Strain Fitness in Caulobacter crescentus NA1000 around CCNA_00097

Experiment: PYE with Spectinomycin 0.08 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Spectinomycin 0.08 mg/ml
107,347	-				-0.6
107,370	-				+0.5
107,377	-				-2.6
107,395	-				-0.4
107,469	-				+1.3
107,551	+		CCNA_00096	0.17	+0.5
107,568	+		CCNA_00096	0.19	-0.3
107,568	+		CCNA_00096	0.19	-0.3
107,568	+		CCNA_00096	0.19	+0.3
107,568	+		CCNA_00096	0.19	-1.6
107,576	-		CCNA_00096	0.20	-1.3
107,640	+		CCNA_00096	0.27	+1.0
107,654	-		CCNA_00096	0.29	-0.3
107,658	+		CCNA_00096	0.29	-0.6
107,666	-		CCNA_00096	0.30	+0.1
107,695	-		CCNA_00096	0.33	+1.8
107,696	+		CCNA_00096	0.33	-0.4
107,696	+		CCNA_00096	0.33	-1.5
107,698	-		CCNA_00096	0.34	+0.3
107,704	-		CCNA_00096	0.34	-0.3
107,718	-		CCNA_00096	0.36	-2.1
107,736	+		CCNA_00096	0.38	-1.0
107,770	-		CCNA_00096	0.42	+0.5
107,779	-		CCNA_00096	0.43	+0.4
107,795	+		CCNA_00096	0.45	+0.6
107,803	-		CCNA_00096	0.46	-0.3
107,805	-		CCNA_00096	0.46	-1.2
107,883	-		CCNA_00096	0.55	-1.0
107,892	+		CCNA_00096	0.56	+0.5
107,950	-		CCNA_00096	0.62	-0.0
107,972	+		CCNA_00096	0.65	-0.2
107,996	+		CCNA_00096	0.68	-0.1
108,028	+		CCNA_00096	0.71	+0.3
108,036	-		CCNA_00096	0.72	+1.5
108,037	-		CCNA_00096	0.72	-0.0
108,044	+		CCNA_00096	0.73	-0.3
108,110	+		CCNA_00096	0.81	-0.0
108,118	-		CCNA_00096	0.81	+0.3
108,118	-		CCNA_00096	0.81	-1.2
108,118	-		CCNA_00096	0.81	-1.7
108,118	-		CCNA_00096	0.81	+1.3
108,124	+		CCNA_00096	0.82	-0.4
108,132	-		CCNA_00096	0.83	-1.0
108,134	+		CCNA_00096	0.83	-0.3
108,142	-		CCNA_00096	0.84	+0.1
108,203	+				-0.8
108,250	+				-0.0
108,255	+				-1.0
108,257	+				-0.6
108,331	+				+0.6
108,384	-		CCNA_00097	0.11	+0.8
108,403	+		CCNA_00097	0.15	-1.8
108,411	-		CCNA_00097	0.17	+0.3
108,416	-		CCNA_00097	0.18	-0.2
108,459	+		CCNA_00097	0.27	-0.6
108,512	-		CCNA_00097	0.39	-2.8
108,524	-		CCNA_00097	0.41	-2.0
108,529	-		CCNA_00097	0.42	-2.1
108,681	-		CCNA_00097	0.76	-0.9
108,681	-		CCNA_00097	0.76	+0.3
108,880	+				+0.1
108,922	-				-1.0
108,932	-				-0.1
108,937	-				+1.5
108,940	+				+0.6
108,948	-				+1.9
108,948	-				+0.3
108,948	-				-1.1
108,964	+				-0.5
108,964	+				-0.2
108,972	-		CCNA_00098	0.10	+0.4
108,972	-		CCNA_00098	0.10	-1.9
108,974	+		CCNA_00098	0.11	-1.0
109,004	-		CCNA_00098	0.21	+0.3
109,004	-		CCNA_00098	0.21	-2.2
109,016	-		CCNA_00098	0.25	-0.3
109,047	+		CCNA_00098	0.36	-0.4
109,106	+		CCNA_00098	0.56	+0.5
109,106	+		CCNA_00098	0.56	-1.0
109,112	+		CCNA_00098	0.58	+0.8
109,114	-		CCNA_00098	0.59	+0.5
109,126	-		CCNA_00098	0.63	+1.4
109,144	+		CCNA_00098	0.69	+2.3
109,144	+		CCNA_00098	0.69	-0.1
109,145	+		CCNA_00098	0.69	-1.2
109,152	-		CCNA_00098	0.72	-0.8
109,152	-		CCNA_00098	0.72	+0.2
109,169	+		CCNA_00098	0.78	+0.3
109,170	-		CCNA_00098	0.78	+0.8
109,170	-		CCNA_00098	0.78	-3.2
109,206	-				-2.2
109,249	+				-0.4
109,251	-				-0.2
109,251	-				+0.0
109,254	+				-1.7
109,267	-				+0.8
109,348	-				+1.0
109,410	-				+0.5
109,453	+		CCNA_00099	0.12	+1.5
109,486	+		CCNA_00099	0.14	-0.0
109,499	-		CCNA_00099	0.15	-0.2
109,521	+		CCNA_00099	0.16	-1.1
109,533	+		CCNA_00099	0.17	-0.2
109,539	+		CCNA_00099	0.17	+0.4
109,541	+		CCNA_00099	0.17	+0.9
109,541	-				+1.5
109,569	+		CCNA_00099	0.19	-0.2
109,577	-		CCNA_00099	0.20	-0.2
109,600	-		CCNA_00099	0.21	-0.9
109,607	-		CCNA_00099	0.21	-1.2
109,608	-		CCNA_00099	0.21	-1.4
109,610	+		CCNA_00099	0.21	-0.2
109,611	+		CCNA_00099	0.21	-0.4
109,613	-		CCNA_00099	0.22	-0.3
109,647	-		CCNA_00099	0.24	+0.4
109,666	+		CCNA_00099	0.25	+0.0
109,686	-		CCNA_00099	0.26	-0.2
109,711	+		CCNA_00099	0.27	+0.3
109,714	-		CCNA_00099	0.27	+2.0
109,714	-		CCNA_00099	0.27	+0.6
109,772	+		CCNA_00099	0.31	+0.6