Experiment: L-Citrulline (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BPHYT_RS20435 and BPHYT_RS20440 are separated by 238 nucleotides BPHYT_RS20440 and BPHYT_RS20445 are separated by 15 nucleotides
BPHYT_RS20435: BPHYT_RS20435 - MFS transporter, at 147,155 to 148,531
_RS20435
BPHYT_RS20440: BPHYT_RS20440 - IclR family transcriptional regulator, at 148,770 to 149,552
_RS20440
BPHYT_RS20445: BPHYT_RS20445 - NAD-dependent dehydratase, at 149,568 to 150,632
_RS20445
Position (kb) 148
149
150 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 147.908 kb on - strand, within BPHYT_RS20435 at 147.909 kb on + strand, within BPHYT_RS20435 at 147.910 kb on - strand, within BPHYT_RS20435 at 147.910 kb on - strand, within BPHYT_RS20435 at 147.910 kb on - strand, within BPHYT_RS20435 at 147.964 kb on - strand, within BPHYT_RS20435 at 148.065 kb on + strand, within BPHYT_RS20435 at 148.065 kb on + strand, within BPHYT_RS20435 at 148.066 kb on - strand, within BPHYT_RS20435 at 148.185 kb on - strand, within BPHYT_RS20435 at 148.675 kb on - strand at 149.426 kb on + strand, within BPHYT_RS20440 at 150.067 kb on + strand, within BPHYT_RS20445 at 150.068 kb on - strand, within BPHYT_RS20445 at 150.196 kb on + strand, within BPHYT_RS20445 at 150.196 kb on + strand, within BPHYT_RS20445 at 150.197 kb on - strand, within BPHYT_RS20445 at 150.199 kb on + strand, within BPHYT_RS20445 at 150.199 kb on + strand, within BPHYT_RS20445 at 150.290 kb on - strand, within BPHYT_RS20445 at 150.290 kb on - strand, within BPHYT_RS20445
Per-strain Table
Position Strand Gene LocusTag Fraction L-Citrulline (N) remove 147,908 - BPHYT_RS20435 0.55 -1.3 147,909 + BPHYT_RS20435 0.55 -1.0 147,910 - BPHYT_RS20435 0.55 +0.4 147,910 - BPHYT_RS20435 0.55 +0.2 147,910 - BPHYT_RS20435 0.55 -2.8 147,964 - BPHYT_RS20435 0.59 -0.1 148,065 + BPHYT_RS20435 0.66 -0.2 148,065 + BPHYT_RS20435 0.66 +0.8 148,066 - BPHYT_RS20435 0.66 -0.5 148,185 - BPHYT_RS20435 0.75 -0.4 148,675 - +0.2 149,426 + BPHYT_RS20440 0.84 -1.0 150,067 + BPHYT_RS20445 0.47 -0.5 150,068 - BPHYT_RS20445 0.47 -1.1 150,196 + BPHYT_RS20445 0.59 +1.5 150,196 + BPHYT_RS20445 0.59 +1.1 150,197 - BPHYT_RS20445 0.59 -0.2 150,199 + BPHYT_RS20445 0.59 +0.6 150,199 + BPHYT_RS20445 0.59 -0.0 150,290 - BPHYT_RS20445 0.68 +0.1 150,290 - BPHYT_RS20445 0.68 -0.7
Or see this region's nucleotide sequence