Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_905 and Ac3H11_906 overlap by 4 nucleotides Ac3H11_906 and Ac3H11_907 are separated by 154 nucleotides Ac3H11_907 and Ac3H11_908 are separated by 136 nucleotides Ac3H11_908 and Ac3H11_909 are separated by 56 nucleotides
Ac3H11_905 - Rhodanese domain protein UPF0176, cyanobacterial/alphaproteobacterial subgroup, at 19,736 to 20,737
_905
Ac3H11_906 - Glutathione S-transferase domain protein, at 20,734 to 21,429
_906
Ac3H11_907 - hypothetical protein, at 21,584 to 21,802
_907
Ac3H11_908 - Periplasmic thiol:disulfide oxidoreductase DsbB, required for DsbA reoxidation, at 21,939 to 22,475
_908
Ac3H11_909 - Sulfate and thiosulfate import ATP-binding protein CysA (EC 3.6.3.25), at 22,532 to 23,656
_909
Position (kb) 21
22 Strain fitness (log2 ratio) -1
0
1
2 at 20.755 kb on + strand at 20.755 kb on + strand at 20.755 kb on + strand at 20.755 kb on + strand at 20.755 kb on + strand at 20.756 kb on - strand at 20.756 kb on - strand at 20.756 kb on - strand at 20.776 kb on + strand at 21.069 kb on + strand, within Ac3H11_906 at 21.069 kb on + strand, within Ac3H11_906 at 21.069 kb on + strand, within Ac3H11_906 at 21.069 kb on + strand, within Ac3H11_906 at 21.069 kb on + strand, within Ac3H11_906 at 21.069 kb on + strand, within Ac3H11_906 at 21.069 kb on + strand, within Ac3H11_906 at 21.069 kb on + strand, within Ac3H11_906 at 21.069 kb on + strand, within Ac3H11_906 at 21.069 kb on + strand, within Ac3H11_906 at 21.070 kb on - strand, within Ac3H11_906 at 21.070 kb on - strand, within Ac3H11_906 at 21.070 kb on - strand, within Ac3H11_906 at 21.070 kb on - strand, within Ac3H11_906 at 21.070 kb on - strand, within Ac3H11_906 at 21.070 kb on - strand, within Ac3H11_906 at 21.070 kb on - strand, within Ac3H11_906 at 21.684 kb on + strand, within Ac3H11_907 at 21.684 kb on + strand, within Ac3H11_907 at 21.685 kb on - strand, within Ac3H11_907 at 21.952 kb on + strand at 22.800 kb on + strand, within Ac3H11_909 at 22.800 kb on + strand, within Ac3H11_909 at 22.801 kb on - strand, within Ac3H11_909
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 20,755 + -0.3 20,755 + +0.3 20,755 + +0.2 20,755 + -0.2 20,755 + +0.1 20,756 - +0.7 20,756 - -1.3 20,756 - -0.1 20,776 + +0.5 21,069 + Ac3H11_906 0.48 -0.2 21,069 + Ac3H11_906 0.48 +1.1 21,069 + Ac3H11_906 0.48 +0.2 21,069 + Ac3H11_906 0.48 +0.2 21,069 + Ac3H11_906 0.48 +0.4 21,069 + Ac3H11_906 0.48 -0.3 21,069 + Ac3H11_906 0.48 -0.2 21,069 + Ac3H11_906 0.48 -0.6 21,069 + Ac3H11_906 0.48 +0.5 21,069 + Ac3H11_906 0.48 -0.4 21,070 - Ac3H11_906 0.48 +0.3 21,070 - Ac3H11_906 0.48 +0.2 21,070 - Ac3H11_906 0.48 -0.4 21,070 - Ac3H11_906 0.48 +0.1 21,070 - Ac3H11_906 0.48 +2.2 21,070 - Ac3H11_906 0.48 -0.1 21,070 - Ac3H11_906 0.48 +1.1 21,684 + Ac3H11_907 0.46 -1.3 21,684 + Ac3H11_907 0.46 -0.4 21,685 - Ac3H11_907 0.46 -0.3 21,952 + +1.1 22,800 + Ac3H11_909 0.24 +0.9 22,800 + Ac3H11_909 0.24 +0.0 22,801 - Ac3H11_909 0.24 -1.6
Or see this region's nucleotide sequence