Experiment: Fusidic 0.125 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_28505 and AO353_28510 are separated by 307 nucleotides AO353_28510 and AO353_28515 are separated by 336 nucleotides
AO353_28505: AO353_28505 - glutathione S-transferase, at 6,210,819 to 6,211,499
_28505
AO353_28510: AO353_28510 - hypothetical protein, at 6,211,807 to 6,212,262
_28510
AO353_28515: AO353_28515 - malate:quinone oxidoreductase, at 6,212,599 to 6,214,248
_28515
Position (kb)
6211
6212
6213 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 6210.834 kb on + strand at 6210.834 kb on + strand at 6210.835 kb on - strand at 6210.837 kb on + strand at 6210.837 kb on + strand at 6210.837 kb on + strand at 6210.838 kb on - strand at 6210.838 kb on - strand at 6210.838 kb on - strand at 6210.838 kb on - strand at 6210.855 kb on + strand at 6210.883 kb on - strand at 6210.883 kb on - strand at 6211.134 kb on + strand, within AO353_28505 at 6211.134 kb on + strand, within AO353_28505 at 6211.134 kb on + strand, within AO353_28505 at 6211.134 kb on + strand, within AO353_28505 at 6211.134 kb on + strand, within AO353_28505 at 6211.134 kb on + strand, within AO353_28505 at 6211.134 kb on + strand, within AO353_28505 at 6211.134 kb on + strand, within AO353_28505 at 6211.134 kb on + strand, within AO353_28505 at 6211.134 kb on + strand, within AO353_28505 at 6211.134 kb on + strand, within AO353_28505 at 6211.134 kb on + strand, within AO353_28505 at 6211.134 kb on + strand, within AO353_28505 at 6211.134 kb on + strand, within AO353_28505 at 6211.134 kb on + strand, within AO353_28505 at 6211.134 kb on + strand, within AO353_28505 at 6211.134 kb on + strand, within AO353_28505 at 6211.134 kb on + strand, within AO353_28505 at 6211.134 kb on + strand, within AO353_28505 at 6211.134 kb on + strand, within AO353_28505 at 6211.134 kb on + strand, within AO353_28505 at 6211.135 kb on - strand, within AO353_28505 at 6211.135 kb on - strand, within AO353_28505 at 6211.135 kb on - strand, within AO353_28505 at 6211.135 kb on - strand, within AO353_28505 at 6211.135 kb on - strand, within AO353_28505 at 6211.135 kb on - strand, within AO353_28505 at 6211.135 kb on - strand, within AO353_28505 at 6211.135 kb on - strand, within AO353_28505 at 6211.135 kb on - strand, within AO353_28505 at 6211.135 kb on - strand, within AO353_28505 at 6211.135 kb on - strand, within AO353_28505 at 6211.135 kb on - strand, within AO353_28505 at 6211.135 kb on - strand, within AO353_28505 at 6211.135 kb on - strand, within AO353_28505 at 6211.135 kb on - strand, within AO353_28505 at 6211.135 kb on - strand, within AO353_28505 at 6211.135 kb on - strand, within AO353_28505 at 6211.135 kb on - strand, within AO353_28505 at 6211.137 kb on - strand, within AO353_28505 at 6211.227 kb on + strand, within AO353_28505 at 6211.227 kb on + strand, within AO353_28505 at 6211.228 kb on - strand, within AO353_28505 at 6211.228 kb on - strand, within AO353_28505 at 6211.228 kb on - strand, within AO353_28505 at 6211.228 kb on - strand, within AO353_28505 at 6211.320 kb on + strand, within AO353_28505 at 6211.321 kb on - strand, within AO353_28505 at 6211.372 kb on - strand, within AO353_28505 at 6211.372 kb on - strand, within AO353_28505 at 6211.431 kb on + strand, within AO353_28505 at 6211.432 kb on - strand at 6211.508 kb on + strand at 6211.509 kb on - strand at 6211.509 kb on - strand at 6211.537 kb on + strand at 6211.537 kb on + strand at 6211.537 kb on + strand at 6211.538 kb on - strand at 6211.538 kb on - strand at 6211.563 kb on + strand at 6211.563 kb on + strand at 6211.563 kb on + strand at 6211.564 kb on - strand at 6211.564 kb on - strand at 6211.564 kb on - strand at 6211.564 kb on - strand at 6211.564 kb on - strand at 6211.569 kb on - strand at 6211.569 kb on - strand at 6211.569 kb on - strand at 6211.585 kb on + strand at 6211.586 kb on - strand at 6211.586 kb on - strand at 6211.586 kb on - strand at 6211.605 kb on + strand at 6211.605 kb on + strand at 6211.605 kb on + strand at 6211.606 kb on - strand at 6211.606 kb on - strand at 6211.606 kb on - strand at 6211.677 kb on - strand at 6211.677 kb on - strand at 6211.677 kb on - strand at 6211.749 kb on + strand at 6211.749 kb on + strand at 6211.750 kb on - strand at 6211.750 kb on - strand at 6211.750 kb on - strand at 6211.750 kb on - strand at 6211.844 kb on + strand at 6211.844 kb on + strand at 6211.844 kb on + strand at 6211.845 kb on - strand at 6211.845 kb on - strand at 6211.845 kb on - strand at 6211.848 kb on + strand at 6211.848 kb on + strand at 6211.848 kb on + strand at 6211.848 kb on + strand at 6211.848 kb on + strand at 6211.848 kb on + strand at 6211.848 kb on + strand at 6211.848 kb on + strand at 6211.848 kb on + strand at 6211.848 kb on + strand at 6211.848 kb on + strand at 6211.848 kb on + strand at 6211.848 kb on + strand at 6211.848 kb on + strand at 6211.848 kb on + strand at 6211.848 kb on + strand at 6211.849 kb on - strand at 6211.849 kb on - strand at 6211.849 kb on - strand at 6211.849 kb on - strand at 6211.849 kb on - strand at 6211.849 kb on - strand at 6211.849 kb on - strand at 6211.849 kb on - strand at 6211.849 kb on - strand at 6211.849 kb on - strand at 6211.849 kb on - strand at 6211.849 kb on - strand at 6211.849 kb on - strand at 6211.904 kb on + strand at 6211.904 kb on + strand at 6211.905 kb on - strand, within AO353_28510 at 6211.905 kb on - strand, within AO353_28510 at 6211.905 kb on - strand, within AO353_28510 at 6211.973 kb on + strand, within AO353_28510 at 6211.974 kb on - strand, within AO353_28510 at 6212.039 kb on + strand, within AO353_28510 at 6212.040 kb on - strand, within AO353_28510 at 6212.040 kb on - strand, within AO353_28510 at 6212.040 kb on - strand, within AO353_28510 at 6212.040 kb on - strand, within AO353_28510 at 6212.040 kb on - strand, within AO353_28510 at 6212.040 kb on - strand, within AO353_28510 at 6212.052 kb on + strand, within AO353_28510 at 6212.053 kb on - strand, within AO353_28510 at 6212.092 kb on - strand, within AO353_28510 at 6212.092 kb on - strand, within AO353_28510 at 6212.092 kb on - strand, within AO353_28510 at 6212.105 kb on + strand, within AO353_28510 at 6212.105 kb on + strand, within AO353_28510 at 6212.105 kb on + strand, within AO353_28510 at 6212.131 kb on + strand, within AO353_28510 at 6212.132 kb on - strand, within AO353_28510 at 6212.136 kb on + strand, within AO353_28510 at 6212.144 kb on + strand, within AO353_28510 at 6212.144 kb on + strand, within AO353_28510 at 6212.144 kb on + strand, within AO353_28510 at 6212.145 kb on - strand, within AO353_28510 at 6212.156 kb on + strand, within AO353_28510 at 6212.156 kb on + strand, within AO353_28510 at 6212.156 kb on + strand, within AO353_28510 at 6212.157 kb on - strand, within AO353_28510 at 6212.160 kb on + strand, within AO353_28510 at 6212.160 kb on + strand, within AO353_28510 at 6212.160 kb on + strand, within AO353_28510 at 6212.161 kb on - strand, within AO353_28510 at 6212.161 kb on - strand, within AO353_28510 at 6212.161 kb on - strand, within AO353_28510 at 6212.161 kb on - strand, within AO353_28510 at 6212.161 kb on - strand, within AO353_28510 at 6212.208 kb on + strand, within AO353_28510 at 6212.208 kb on + strand, within AO353_28510 at 6212.208 kb on + strand, within AO353_28510 at 6212.208 kb on + strand, within AO353_28510 at 6212.208 kb on + strand, within AO353_28510 at 6212.208 kb on + strand, within AO353_28510 at 6212.209 kb on - strand, within AO353_28510 at 6212.209 kb on - strand, within AO353_28510 at 6212.209 kb on - strand, within AO353_28510 at 6212.209 kb on - strand, within AO353_28510 at 6212.209 kb on - strand, within AO353_28510 at 6212.209 kb on - strand, within AO353_28510 at 6212.209 kb on - strand, within AO353_28510 at 6212.209 kb on - strand, within AO353_28510 at 6212.209 kb on - strand, within AO353_28510 at 6212.209 kb on - strand, within AO353_28510 at 6212.209 kb on - strand, within AO353_28510 at 6212.236 kb on + strand at 6212.251 kb on + strand at 6212.251 kb on + strand at 6212.251 kb on + strand at 6212.251 kb on + strand at 6212.252 kb on - strand at 6212.252 kb on - strand at 6212.255 kb on + strand at 6212.255 kb on + strand at 6212.256 kb on - strand at 6212.299 kb on + strand at 6212.299 kb on + strand at 6212.299 kb on + strand at 6212.299 kb on + strand at 6212.299 kb on + strand at 6212.299 kb on + strand at 6212.299 kb on + strand at 6212.299 kb on + strand at 6212.299 kb on + strand at 6212.299 kb on + strand at 6212.300 kb on - strand at 6212.300 kb on - strand at 6212.300 kb on - strand at 6212.323 kb on + strand at 6212.324 kb on - strand at 6212.324 kb on - strand at 6212.324 kb on - strand at 6212.335 kb on + strand at 6212.335 kb on + strand at 6212.336 kb on - strand at 6212.336 kb on - strand at 6212.369 kb on + strand at 6212.369 kb on + strand at 6212.369 kb on + strand at 6212.370 kb on - strand at 6212.370 kb on - strand at 6212.370 kb on - strand at 6212.415 kb on + strand at 6212.415 kb on + strand at 6212.415 kb on + strand at 6212.415 kb on + strand at 6212.415 kb on + strand at 6212.416 kb on - strand at 6212.416 kb on - strand at 6212.416 kb on - strand at 6212.416 kb on - strand at 6212.416 kb on - strand at 6212.425 kb on + strand at 6212.425 kb on + strand at 6212.425 kb on + strand at 6212.425 kb on + strand at 6212.425 kb on + strand at 6212.425 kb on + strand at 6212.426 kb on - strand at 6212.426 kb on - strand at 6212.430 kb on - strand at 6212.430 kb on - strand at 6212.436 kb on - strand at 6212.472 kb on - strand at 6212.472 kb on - strand at 6212.492 kb on + strand at 6212.492 kb on + strand at 6212.492 kb on + strand at 6212.493 kb on - strand at 6212.493 kb on - strand at 6212.726 kb on + strand at 6212.726 kb on + strand at 6212.727 kb on - strand at 6212.727 kb on - strand at 6212.741 kb on + strand at 6212.777 kb on + strand, within AO353_28515 at 6213.047 kb on + strand, within AO353_28515 at 6213.048 kb on - strand, within AO353_28515 at 6213.104 kb on + strand, within AO353_28515 at 6213.105 kb on - strand, within AO353_28515 at 6213.188 kb on + strand, within AO353_28515 at 6213.188 kb on + strand, within AO353_28515 at 6213.188 kb on + strand, within AO353_28515 at 6213.189 kb on - strand, within AO353_28515 at 6213.189 kb on - strand, within AO353_28515
Per-strain Table
Position Strand Gene LocusTag Fraction Fusidic 0.125 mg/ml remove 6,210,834 + -0.4 6,210,834 + -1.4 6,210,835 - -0.2 6,210,837 + +0.2 6,210,837 + -1.4 6,210,837 + +0.0 6,210,838 - -1.4 6,210,838 - +0.2 6,210,838 - -0.1 6,210,838 - +0.9 6,210,855 + -1.6 6,210,883 - -0.0 6,210,883 - -1.4 6,211,134 + AO353_28505 0.46 -0.4 6,211,134 + AO353_28505 0.46 +0.3 6,211,134 + AO353_28505 0.46 +0.4 6,211,134 + AO353_28505 0.46 +0.3 6,211,134 + AO353_28505 0.46 -0.2 6,211,134 + AO353_28505 0.46 +0.3 6,211,134 + AO353_28505 0.46 +0.6 6,211,134 + AO353_28505 0.46 -1.2 6,211,134 + AO353_28505 0.46 -1.2 6,211,134 + AO353_28505 0.46 -0.7 6,211,134 + AO353_28505 0.46 -0.4 6,211,134 + AO353_28505 0.46 -0.1 6,211,134 + AO353_28505 0.46 +0.6 6,211,134 + AO353_28505 0.46 -1.2 6,211,134 + AO353_28505 0.46 +0.3 6,211,134 + AO353_28505 0.46 -1.7 6,211,134 + AO353_28505 0.46 +0.1 6,211,134 + AO353_28505 0.46 +0.5 6,211,134 + AO353_28505 0.46 +0.4 6,211,134 + AO353_28505 0.46 -0.6 6,211,134 + AO353_28505 0.46 -1.1 6,211,135 - AO353_28505 0.46 +0.4 6,211,135 - AO353_28505 0.46 +1.2 6,211,135 - AO353_28505 0.46 -1.0 6,211,135 - AO353_28505 0.46 -1.1 6,211,135 - AO353_28505 0.46 +0.9 6,211,135 - AO353_28505 0.46 +0.4 6,211,135 - AO353_28505 0.46 -1.6 6,211,135 - AO353_28505 0.46 +0.4 6,211,135 - AO353_28505 0.46 +0.4 6,211,135 - AO353_28505 0.46 +1.5 6,211,135 - AO353_28505 0.46 +1.0 6,211,135 - AO353_28505 0.46 +1.0 6,211,135 - AO353_28505 0.46 -0.4 6,211,135 - AO353_28505 0.46 +0.2 6,211,135 - AO353_28505 0.46 -0.8 6,211,135 - AO353_28505 0.46 +0.9 6,211,135 - AO353_28505 0.46 -1.6 6,211,135 - AO353_28505 0.46 -0.7 6,211,137 - AO353_28505 0.47 +1.2 6,211,227 + AO353_28505 0.60 -1.4 6,211,227 + AO353_28505 0.60 -0.5 6,211,228 - AO353_28505 0.60 +0.8 6,211,228 - AO353_28505 0.60 -0.2 6,211,228 - AO353_28505 0.60 -2.0 6,211,228 - AO353_28505 0.60 +0.0 6,211,320 + AO353_28505 0.74 +0.0 6,211,321 - AO353_28505 0.74 +1.3 6,211,372 - AO353_28505 0.81 -0.8 6,211,372 - AO353_28505 0.81 -0.2 6,211,431 + AO353_28505 0.90 -1.3 6,211,432 - +1.2 6,211,508 + +0.2 6,211,509 - +1.1 6,211,509 - +1.3 6,211,537 + +0.6 6,211,537 + +0.6 6,211,537 + +0.3 6,211,538 - -0.9 6,211,538 - -2.5 6,211,563 + -2.3 6,211,563 + +0.2 6,211,563 + +1.2 6,211,564 - +0.3 6,211,564 - -1.4 6,211,564 - -0.9 6,211,564 - +1.6 6,211,564 - +0.3 6,211,569 - -1.6 6,211,569 - +0.5 6,211,569 - +0.5 6,211,585 + +0.4 6,211,586 - +0.0 6,211,586 - -2.1 6,211,586 - -0.5 6,211,605 + +1.6 6,211,605 + +0.7 6,211,605 + -1.7 6,211,606 - +0.1 6,211,606 - -0.4 6,211,606 - +0.0 6,211,677 - -1.7 6,211,677 - +0.7 6,211,677 - -1.7 6,211,749 + +0.0 6,211,749 + -1.6 6,211,750 - -2.0 6,211,750 - -0.5 6,211,750 - -0.1 6,211,750 - -0.8 6,211,844 + +1.2 6,211,844 + +0.5 6,211,844 + -2.2 6,211,845 - -1.4 6,211,845 - -0.5 6,211,845 - +0.9 6,211,848 + +0.8 6,211,848 + +1.2 6,211,848 + +0.3 6,211,848 + -0.4 6,211,848 + -1.2 6,211,848 + +0.3 6,211,848 + +0.0 6,211,848 + -0.3 6,211,848 + +1.4 6,211,848 + +0.6 6,211,848 + +1.6 6,211,848 + +1.6 6,211,848 + -1.1 6,211,848 + +0.7 6,211,848 + +0.9 6,211,848 + -0.2 6,211,849 - +1.6 6,211,849 - -0.4 6,211,849 - +1.1 6,211,849 - +0.2 6,211,849 - -0.3 6,211,849 - +1.6 6,211,849 - +1.4 6,211,849 - +1.9 6,211,849 - +1.0 6,211,849 - -1.4 6,211,849 - +0.0 6,211,849 - -0.5 6,211,849 - +0.0 6,211,904 + +0.0 6,211,904 + -0.7 6,211,905 - AO353_28510 0.21 +1.3 6,211,905 - AO353_28510 0.21 -1.6 6,211,905 - AO353_28510 0.21 +2.3 6,211,973 + AO353_28510 0.36 +1.9 6,211,974 - AO353_28510 0.37 +0.1 6,212,039 + AO353_28510 0.51 +0.7 6,212,040 - AO353_28510 0.51 -0.1 6,212,040 - AO353_28510 0.51 -2.2 6,212,040 - AO353_28510 0.51 +1.6 6,212,040 - AO353_28510 0.51 -1.4 6,212,040 - AO353_28510 0.51 -1.4 6,212,040 - AO353_28510 0.51 +1.1 6,212,052 + AO353_28510 0.54 -1.5 6,212,053 - AO353_28510 0.54 +0.1 6,212,092 - AO353_28510 0.62 +1.0 6,212,092 - AO353_28510 0.62 +1.0 6,212,092 - AO353_28510 0.62 +1.1 6,212,105 + AO353_28510 0.65 +0.8 6,212,105 + AO353_28510 0.65 +1.3 6,212,105 + AO353_28510 0.65 +0.4 6,212,131 + AO353_28510 0.71 -2.4 6,212,132 - AO353_28510 0.71 -0.4 6,212,136 + AO353_28510 0.72 +0.5 6,212,144 + AO353_28510 0.74 -1.2 6,212,144 + AO353_28510 0.74 +0.6 6,212,144 + AO353_28510 0.74 +0.9 6,212,145 - AO353_28510 0.74 -0.1 6,212,156 + AO353_28510 0.77 -1.2 6,212,156 + AO353_28510 0.77 -0.1 6,212,156 + AO353_28510 0.77 +0.3 6,212,157 - AO353_28510 0.77 -0.4 6,212,160 + AO353_28510 0.77 -0.6 6,212,160 + AO353_28510 0.77 +0.7 6,212,160 + AO353_28510 0.77 +1.6 6,212,161 - AO353_28510 0.78 +1.3 6,212,161 - AO353_28510 0.78 +0.1 6,212,161 - AO353_28510 0.78 -1.0 6,212,161 - AO353_28510 0.78 +0.3 6,212,161 - AO353_28510 0.78 +0.4 6,212,208 + AO353_28510 0.88 +1.0 6,212,208 + AO353_28510 0.88 +0.2 6,212,208 + AO353_28510 0.88 +1.0 6,212,208 + AO353_28510 0.88 +0.8 6,212,208 + AO353_28510 0.88 +0.5 6,212,208 + AO353_28510 0.88 -0.7 6,212,209 - AO353_28510 0.88 +0.3 6,212,209 - AO353_28510 0.88 -0.4 6,212,209 - AO353_28510 0.88 -0.2 6,212,209 - AO353_28510 0.88 +0.3 6,212,209 - AO353_28510 0.88 -2.3 6,212,209 - AO353_28510 0.88 -1.8 6,212,209 - AO353_28510 0.88 -0.7 6,212,209 - AO353_28510 0.88 -0.8 6,212,209 - AO353_28510 0.88 -1.0 6,212,209 - AO353_28510 0.88 -0.2 6,212,209 - AO353_28510 0.88 +1.0 6,212,236 + -1.3 6,212,251 + +0.6 6,212,251 + +0.0 6,212,251 + -0.3 6,212,251 + +0.2 6,212,252 - -0.8 6,212,252 - +0.4 6,212,255 + +1.0 6,212,255 + -2.2 6,212,256 - +1.2 6,212,299 + -0.3 6,212,299 + +0.9 6,212,299 + +0.3 6,212,299 + +1.0 6,212,299 + -0.3 6,212,299 + +1.3 6,212,299 + +0.2 6,212,299 + -0.3 6,212,299 + +0.7 6,212,299 + +0.8 6,212,300 - +1.0 6,212,300 - -0.3 6,212,300 - +1.6 6,212,323 + -0.0 6,212,324 - -2.4 6,212,324 - -0.7 6,212,324 - -0.0 6,212,335 + +2.8 6,212,335 + +0.9 6,212,336 - -0.2 6,212,336 - -0.2 6,212,369 + -1.8 6,212,369 + -1.1 6,212,369 + -1.2 6,212,370 - -1.8 6,212,370 - -0.4 6,212,370 - +0.8 6,212,415 + -0.4 6,212,415 + +0.3 6,212,415 + +0.6 6,212,415 + +0.3 6,212,415 + +0.2 6,212,416 - -0.4 6,212,416 - +0.2 6,212,416 - +0.6 6,212,416 - -0.1 6,212,416 - +1.3 6,212,425 + -0.7 6,212,425 + -0.2 6,212,425 + -0.1 6,212,425 + -1.2 6,212,425 + -1.3 6,212,425 + -1.0 6,212,426 - +0.2 6,212,426 - -1.0 6,212,430 - +1.4 6,212,430 - -1.1 6,212,436 - -0.7 6,212,472 - -1.4 6,212,472 - +0.3 6,212,492 + +1.0 6,212,492 + -2.2 6,212,492 + -1.9 6,212,493 - +1.0 6,212,493 - +0.7 6,212,726 + +0.5 6,212,726 + +1.4 6,212,727 - -0.4 6,212,727 - -1.0 6,212,741 + +0.2 6,212,777 + AO353_28515 0.11 +0.2 6,213,047 + AO353_28515 0.27 +1.8 6,213,048 - AO353_28515 0.27 -1.6 6,213,104 + AO353_28515 0.31 -0.7 6,213,105 - AO353_28515 0.31 +0.0 6,213,188 + AO353_28515 0.36 +0.8 6,213,188 + AO353_28515 0.36 -0.6 6,213,188 + AO353_28515 0.36 +0.9 6,213,189 - AO353_28515 0.36 +0.8 6,213,189 - AO353_28515 0.36 +1.1
Or see this region's nucleotide sequence