Experiment: Fusidic 0.125 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_23710 and AO353_23715 overlap by 4 nucleotides AO353_23715 and AO353_23720 overlap by 4 nucleotides
AO353_23710: AO353_23710 - protein BatD, at 5,196,687 to 5,198,327
_23710
AO353_23715: AO353_23715 - hypothetical protein, at 5,198,324 to 5,200,075
_23715
AO353_23720: AO353_23720 - BatB protein, at 5,200,072 to 5,201,148
_23720
Position (kb)
5198
5199
5200
5201 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 5197.484 kb on + strand, within AO353_23710 at 5197.484 kb on + strand, within AO353_23710 at 5197.771 kb on + strand, within AO353_23710 at 5197.772 kb on - strand, within AO353_23710 at 5197.826 kb on + strand, within AO353_23710 at 5197.827 kb on - strand, within AO353_23710 at 5197.844 kb on - strand, within AO353_23710 at 5197.844 kb on - strand, within AO353_23710 at 5197.844 kb on - strand, within AO353_23710 at 5197.861 kb on + strand, within AO353_23710 at 5197.862 kb on - strand, within AO353_23710 at 5197.897 kb on + strand, within AO353_23710 at 5197.897 kb on + strand, within AO353_23710 at 5197.898 kb on - strand, within AO353_23710 at 5197.898 kb on - strand, within AO353_23710 at 5197.898 kb on - strand, within AO353_23710 at 5197.898 kb on - strand, within AO353_23710 at 5198.005 kb on + strand, within AO353_23710 at 5198.005 kb on + strand, within AO353_23710 at 5198.364 kb on + strand at 5198.738 kb on + strand, within AO353_23715 at 5198.739 kb on - strand at 5198.769 kb on - strand, within AO353_23715 at 5198.799 kb on + strand, within AO353_23715 at 5198.800 kb on - strand, within AO353_23715 at 5198.800 kb on - strand, within AO353_23715 at 5198.857 kb on - strand, within AO353_23715 at 5198.857 kb on - strand, within AO353_23715 at 5198.857 kb on - strand, within AO353_23715 at 5198.857 kb on - strand, within AO353_23715 at 5198.857 kb on - strand, within AO353_23715 at 5198.907 kb on + strand, within AO353_23715 at 5198.907 kb on + strand, within AO353_23715 at 5198.908 kb on - strand, within AO353_23715 at 5198.922 kb on + strand, within AO353_23715 at 5198.922 kb on + strand, within AO353_23715 at 5198.922 kb on + strand, within AO353_23715 at 5198.923 kb on - strand, within AO353_23715 at 5199.048 kb on + strand, within AO353_23715 at 5199.147 kb on + strand, within AO353_23715 at 5199.148 kb on - strand, within AO353_23715 at 5199.203 kb on - strand, within AO353_23715 at 5199.296 kb on - strand, within AO353_23715 at 5199.521 kb on + strand, within AO353_23715 at 5199.702 kb on - strand, within AO353_23715 at 5200.238 kb on + strand, within AO353_23720 at 5200.238 kb on + strand, within AO353_23720 at 5200.239 kb on - strand, within AO353_23720 at 5200.239 kb on - strand, within AO353_23720 at 5200.239 kb on - strand, within AO353_23720 at 5200.346 kb on + strand, within AO353_23720 at 5200.671 kb on + strand, within AO353_23720 at 5200.672 kb on - strand, within AO353_23720 at 5200.712 kb on + strand, within AO353_23720 at 5200.712 kb on + strand, within AO353_23720 at 5200.713 kb on - strand, within AO353_23720 at 5200.713 kb on - strand, within AO353_23720
Per-strain Table
Position Strand Gene LocusTag Fraction Fusidic 0.125 mg/ml remove 5,197,484 + AO353_23710 0.49 -0.4 5,197,484 + AO353_23710 0.49 -0.6 5,197,771 + AO353_23710 0.66 -0.6 5,197,772 - AO353_23710 0.66 +0.1 5,197,826 + AO353_23710 0.69 -1.8 5,197,827 - AO353_23710 0.69 -2.5 5,197,844 - AO353_23710 0.71 -1.8 5,197,844 - AO353_23710 0.71 -1.4 5,197,844 - AO353_23710 0.71 +0.1 5,197,861 + AO353_23710 0.72 -1.5 5,197,862 - AO353_23710 0.72 -1.2 5,197,897 + AO353_23710 0.74 -0.9 5,197,897 + AO353_23710 0.74 +0.9 5,197,898 - AO353_23710 0.74 -1.2 5,197,898 - AO353_23710 0.74 -1.1 5,197,898 - AO353_23710 0.74 -2.5 5,197,898 - AO353_23710 0.74 -1.2 5,198,005 + AO353_23710 0.80 -1.8 5,198,005 + AO353_23710 0.80 -0.6 5,198,364 + -1.1 5,198,738 + AO353_23715 0.24 -2.2 5,198,739 - -0.2 5,198,769 - AO353_23715 0.25 -1.2 5,198,799 + AO353_23715 0.27 -1.5 5,198,800 - AO353_23715 0.27 -1.9 5,198,800 - AO353_23715 0.27 -1.8 5,198,857 - AO353_23715 0.30 -1.5 5,198,857 - AO353_23715 0.30 -0.6 5,198,857 - AO353_23715 0.30 -1.8 5,198,857 - AO353_23715 0.30 -2.1 5,198,857 - AO353_23715 0.30 -0.7 5,198,907 + AO353_23715 0.33 -0.4 5,198,907 + AO353_23715 0.33 -1.7 5,198,908 - AO353_23715 0.33 -1.5 5,198,922 + AO353_23715 0.34 -0.7 5,198,922 + AO353_23715 0.34 -2.8 5,198,922 + AO353_23715 0.34 -1.8 5,198,923 - AO353_23715 0.34 -1.2 5,199,048 + AO353_23715 0.41 -1.1 5,199,147 + AO353_23715 0.47 -0.6 5,199,148 - AO353_23715 0.47 -1.8 5,199,203 - AO353_23715 0.50 -2.1 5,199,296 - AO353_23715 0.55 -1.8 5,199,521 + AO353_23715 0.68 -0.9 5,199,702 - AO353_23715 0.79 -1.7 5,200,238 + AO353_23720 0.15 -0.6 5,200,238 + AO353_23720 0.15 -0.6 5,200,239 - AO353_23720 0.16 -0.8 5,200,239 - AO353_23720 0.16 -0.9 5,200,239 - AO353_23720 0.16 -0.6 5,200,346 + AO353_23720 0.25 -1.2 5,200,671 + AO353_23720 0.56 -1.4 5,200,672 - AO353_23720 0.56 -1.4 5,200,712 + AO353_23720 0.59 -1.6 5,200,712 + AO353_23720 0.59 -0.2 5,200,713 - AO353_23720 0.60 -1.8 5,200,713 - AO353_23720 0.60 -2.6
Or see this region's nucleotide sequence