Experiment: Fusidic 0.125 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_21435 and AO353_21440 are separated by 139 nucleotides AO353_21440 and AO353_21445 are separated by 39 nucleotides AO353_21445 and AO353_21450 overlap by 4 nucleotides AO353_21450 and AO353_21455 overlap by 4 nucleotides
AO353_21435: AO353_21435 - ABC transporter substrate-binding protein, at 4,691,068 to 4,692,081
_21435
AO353_21440: AO353_21440 - hypothetical protein, at 4,692,221 to 4,692,658
_21440
AO353_21445: AO353_21445 - cation:proton antiporter, at 4,692,698 to 4,693,066
_21445
AO353_21450: AO353_21450 - cation:proton antiporter, at 4,693,063 to 4,693,341
_21450
AO353_21455: AO353_21455 - cation:proton antiporter, at 4,693,338 to 4,693,826
_21455
Position (kb)
4692
4693 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 4691.251 kb on - strand, within AO353_21435 at 4691.251 kb on - strand, within AO353_21435 at 4691.428 kb on + strand, within AO353_21435 at 4691.428 kb on + strand, within AO353_21435 at 4691.429 kb on - strand, within AO353_21435 at 4691.506 kb on + strand, within AO353_21435 at 4691.507 kb on - strand, within AO353_21435 at 4691.507 kb on - strand, within AO353_21435 at 4691.559 kb on + strand, within AO353_21435 at 4691.611 kb on + strand, within AO353_21435 at 4691.611 kb on + strand, within AO353_21435 at 4691.629 kb on + strand, within AO353_21435 at 4691.629 kb on + strand, within AO353_21435 at 4691.629 kb on + strand, within AO353_21435 at 4691.629 kb on + strand at 4691.629 kb on + strand, within AO353_21435 at 4691.629 kb on + strand, within AO353_21435 at 4691.629 kb on + strand at 4691.629 kb on + strand, within AO353_21435 at 4691.629 kb on + strand, within AO353_21435 at 4691.629 kb on + strand, within AO353_21435 at 4691.629 kb on + strand, within AO353_21435 at 4691.629 kb on + strand, within AO353_21435 at 4691.630 kb on - strand, within AO353_21435 at 4691.630 kb on - strand, within AO353_21435 at 4691.630 kb on - strand, within AO353_21435 at 4691.630 kb on - strand, within AO353_21435 at 4691.630 kb on - strand, within AO353_21435 at 4691.630 kb on - strand, within AO353_21435 at 4691.630 kb on - strand, within AO353_21435 at 4691.630 kb on - strand, within AO353_21435 at 4691.630 kb on - strand, within AO353_21435 at 4691.630 kb on - strand, within AO353_21435 at 4691.630 kb on - strand at 4691.630 kb on - strand, within AO353_21435 at 4691.630 kb on - strand, within AO353_21435 at 4691.630 kb on - strand, within AO353_21435 at 4691.713 kb on + strand, within AO353_21435 at 4691.713 kb on + strand, within AO353_21435 at 4691.714 kb on - strand, within AO353_21435 at 4691.714 kb on - strand, within AO353_21435 at 4691.714 kb on - strand, within AO353_21435 at 4691.714 kb on - strand, within AO353_21435 at 4691.716 kb on + strand at 4691.716 kb on + strand, within AO353_21435 at 4691.916 kb on + strand, within AO353_21435 at 4691.917 kb on - strand, within AO353_21435 at 4692.079 kb on + strand at 4692.079 kb on + strand at 4692.080 kb on - strand at 4692.284 kb on + strand, within AO353_21440 at 4692.284 kb on + strand, within AO353_21440 at 4692.285 kb on - strand, within AO353_21440 at 4692.333 kb on + strand, within AO353_21440 at 4692.333 kb on + strand, within AO353_21440 at 4692.333 kb on + strand, within AO353_21440 at 4692.333 kb on + strand, within AO353_21440 at 4692.334 kb on - strand, within AO353_21440 at 4692.334 kb on - strand, within AO353_21440 at 4692.334 kb on - strand, within AO353_21440 at 4692.603 kb on - strand, within AO353_21440 at 4692.663 kb on + strand at 4692.664 kb on - strand at 4692.664 kb on - strand at 4692.951 kb on + strand, within AO353_21445 at 4692.951 kb on + strand, within AO353_21445 at 4692.951 kb on + strand, within AO353_21445 at 4692.951 kb on + strand, within AO353_21445 at 4692.951 kb on + strand, within AO353_21445 at 4692.952 kb on - strand, within AO353_21445 at 4693.154 kb on + strand, within AO353_21450 at 4693.154 kb on + strand, within AO353_21450 at 4693.154 kb on + strand, within AO353_21450 at 4693.154 kb on + strand, within AO353_21450 at 4693.154 kb on + strand, within AO353_21450 at 4693.154 kb on + strand, within AO353_21450 at 4693.154 kb on + strand, within AO353_21450 at 4693.155 kb on - strand, within AO353_21450 at 4693.155 kb on - strand, within AO353_21450 at 4693.155 kb on - strand, within AO353_21450 at 4693.155 kb on - strand, within AO353_21450 at 4693.170 kb on - strand, within AO353_21450 at 4693.209 kb on + strand, within AO353_21450 at 4693.211 kb on + strand, within AO353_21450 at 4693.211 kb on + strand, within AO353_21450 at 4693.211 kb on + strand, within AO353_21450 at 4693.211 kb on + strand, within AO353_21450 at 4693.211 kb on + strand, within AO353_21450 at 4693.211 kb on + strand, within AO353_21450 at 4693.211 kb on + strand, within AO353_21450 at 4693.211 kb on + strand, within AO353_21450 at 4693.211 kb on + strand, within AO353_21450 at 4693.211 kb on + strand, within AO353_21450 at 4693.211 kb on + strand, within AO353_21450 at 4693.212 kb on - strand, within AO353_21450 at 4693.212 kb on - strand, within AO353_21450 at 4693.212 kb on - strand, within AO353_21450 at 4693.212 kb on - strand, within AO353_21450 at 4693.212 kb on - strand, within AO353_21450 at 4693.212 kb on - strand, within AO353_21450 at 4693.212 kb on - strand, within AO353_21450 at 4693.212 kb on - strand, within AO353_21450 at 4693.217 kb on + strand, within AO353_21450 at 4693.217 kb on + strand, within AO353_21450 at 4693.218 kb on - strand, within AO353_21450 at 4693.218 kb on - strand, within AO353_21450 at 4693.218 kb on - strand, within AO353_21450 at 4693.218 kb on - strand, within AO353_21450 at 4693.369 kb on + strand at 4693.369 kb on + strand at 4693.369 kb on + strand at 4693.369 kb on + strand at 4693.369 kb on + strand at 4693.369 kb on + strand at 4693.369 kb on + strand at 4693.369 kb on + strand at 4693.369 kb on + strand at 4693.370 kb on - strand at 4693.370 kb on - strand at 4693.370 kb on - strand at 4693.370 kb on - strand at 4693.370 kb on - strand at 4693.370 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Fusidic 0.125 mg/ml remove 4,691,251 - AO353_21435 0.18 +0.5 4,691,251 - AO353_21435 0.18 -0.4 4,691,428 + AO353_21435 0.36 -0.5 4,691,428 + AO353_21435 0.36 -0.1 4,691,429 - AO353_21435 0.36 +0.2 4,691,506 + AO353_21435 0.43 -1.6 4,691,507 - AO353_21435 0.43 -0.4 4,691,507 - AO353_21435 0.43 -1.0 4,691,559 + AO353_21435 0.48 -1.2 4,691,611 + AO353_21435 0.54 -0.8 4,691,611 + AO353_21435 0.54 -2.0 4,691,629 + AO353_21435 0.55 -0.4 4,691,629 + AO353_21435 0.55 -0.3 4,691,629 + AO353_21435 0.55 +0.4 4,691,629 + +0.9 4,691,629 + AO353_21435 0.55 -0.2 4,691,629 + AO353_21435 0.55 -1.1 4,691,629 + +1.6 4,691,629 + AO353_21435 0.55 -1.2 4,691,629 + AO353_21435 0.55 -0.6 4,691,629 + AO353_21435 0.55 +0.0 4,691,629 + AO353_21435 0.55 -0.5 4,691,629 + AO353_21435 0.55 +0.0 4,691,630 - AO353_21435 0.55 -1.2 4,691,630 - AO353_21435 0.55 -0.3 4,691,630 - AO353_21435 0.55 +0.3 4,691,630 - AO353_21435 0.55 -1.2 4,691,630 - AO353_21435 0.55 -0.6 4,691,630 - AO353_21435 0.55 +1.0 4,691,630 - AO353_21435 0.55 +0.5 4,691,630 - AO353_21435 0.55 -0.3 4,691,630 - AO353_21435 0.55 +0.0 4,691,630 - AO353_21435 0.55 +1.9 4,691,630 - -0.4 4,691,630 - AO353_21435 0.55 -1.1 4,691,630 - AO353_21435 0.55 +0.4 4,691,630 - AO353_21435 0.55 -0.2 4,691,713 + AO353_21435 0.64 -0.7 4,691,713 + AO353_21435 0.64 -0.8 4,691,714 - AO353_21435 0.64 +0.3 4,691,714 - AO353_21435 0.64 +0.0 4,691,714 - AO353_21435 0.64 +2.0 4,691,714 - AO353_21435 0.64 -0.5 4,691,716 + +0.6 4,691,716 + AO353_21435 0.64 +0.6 4,691,916 + AO353_21435 0.84 -0.7 4,691,917 - AO353_21435 0.84 +1.2 4,692,079 + -2.2 4,692,079 + -1.9 4,692,080 - -1.0 4,692,284 + AO353_21440 0.14 +1.6 4,692,284 + AO353_21440 0.14 -1.7 4,692,285 - AO353_21440 0.15 +1.3 4,692,333 + AO353_21440 0.26 -2.3 4,692,333 + AO353_21440 0.26 -1.1 4,692,333 + AO353_21440 0.26 -0.2 4,692,333 + AO353_21440 0.26 -0.6 4,692,334 - AO353_21440 0.26 +0.0 4,692,334 - AO353_21440 0.26 -0.3 4,692,334 - AO353_21440 0.26 -1.6 4,692,603 - AO353_21440 0.87 -1.6 4,692,663 + -0.8 4,692,664 - -1.0 4,692,664 - -1.0 4,692,951 + AO353_21445 0.69 +0.4 4,692,951 + AO353_21445 0.69 -2.4 4,692,951 + AO353_21445 0.69 -0.2 4,692,951 + AO353_21445 0.69 +0.2 4,692,951 + AO353_21445 0.69 -0.1 4,692,952 - AO353_21445 0.69 -0.5 4,693,154 + AO353_21450 0.33 +0.8 4,693,154 + AO353_21450 0.33 -3.0 4,693,154 + AO353_21450 0.33 +0.9 4,693,154 + AO353_21450 0.33 -0.7 4,693,154 + AO353_21450 0.33 -1.4 4,693,154 + AO353_21450 0.33 +0.1 4,693,154 + AO353_21450 0.33 -0.4 4,693,155 - AO353_21450 0.33 -0.7 4,693,155 - AO353_21450 0.33 -0.7 4,693,155 - AO353_21450 0.33 -2.3 4,693,155 - AO353_21450 0.33 +0.1 4,693,170 - AO353_21450 0.38 +0.1 4,693,209 + AO353_21450 0.52 -0.7 4,693,211 + AO353_21450 0.53 +0.4 4,693,211 + AO353_21450 0.53 +0.4 4,693,211 + AO353_21450 0.53 -0.4 4,693,211 + AO353_21450 0.53 -1.7 4,693,211 + AO353_21450 0.53 +0.0 4,693,211 + AO353_21450 0.53 +0.9 4,693,211 + AO353_21450 0.53 +1.2 4,693,211 + AO353_21450 0.53 +0.1 4,693,211 + AO353_21450 0.53 -1.9 4,693,211 + AO353_21450 0.53 -0.3 4,693,211 + AO353_21450 0.53 +0.2 4,693,212 - AO353_21450 0.53 -0.7 4,693,212 - AO353_21450 0.53 -0.3 4,693,212 - AO353_21450 0.53 +0.7 4,693,212 - AO353_21450 0.53 +0.3 4,693,212 - AO353_21450 0.53 +0.3 4,693,212 - AO353_21450 0.53 -0.3 4,693,212 - AO353_21450 0.53 -2.0 4,693,212 - AO353_21450 0.53 -1.3 4,693,217 + AO353_21450 0.55 +0.5 4,693,217 + AO353_21450 0.55 +0.9 4,693,218 - AO353_21450 0.56 +0.0 4,693,218 - AO353_21450 0.56 -3.1 4,693,218 - AO353_21450 0.56 +1.6 4,693,218 - AO353_21450 0.56 -0.9 4,693,369 + +0.6 4,693,369 + -0.6 4,693,369 + +0.2 4,693,369 + -1.9 4,693,369 + +2.2 4,693,369 + +0.1 4,693,369 + +0.7 4,693,369 + +0.2 4,693,369 + -1.0 4,693,370 - +0.0 4,693,370 - +0.9 4,693,370 - -1.9 4,693,370 - -0.9 4,693,370 - +1.6 4,693,370 - -1.4
Or see this region's nucleotide sequence