Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_19890

Experiment: Fusidic 0.125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Fusidic 0.125 mg/ml
4,370,444	+		AO353_19880	0.44	-0.3
4,370,445	-		AO353_19880	0.44	+0.7
4,370,474	+		AO353_19880	0.48	+0.7
4,370,475	-		AO353_19880	0.48	+0.1
4,370,632	+		AO353_19880	0.66	+0.0
4,370,632	+		AO353_19880	0.66	+0.5
4,370,632	+		AO353_19880	0.66	-1.8
4,370,633	-		AO353_19880	0.66	-1.1
4,370,633	-		AO353_19880	0.66	-0.3
4,370,645	+		AO353_19880	0.67	-1.0
4,370,646	-		AO353_19880	0.67	-0.0
4,370,773	+		AO353_19880	0.82	-0.6
4,370,773	+		AO353_19880	0.82	+0.4
4,370,773	+				+1.0
4,370,774	-		AO353_19880	0.82	-0.1
4,370,774	-		AO353_19880	0.82	-0.1
4,370,903	+				-2.5
4,370,933	+				-1.1
4,370,969	+				-0.3
4,370,969	+				+0.8
4,371,025	-		AO353_19885	0.13	-0.8
4,371,066	-		AO353_19885	0.23	+0.3
4,371,066	-		AO353_19885	0.23	-0.3
4,371,090	+		AO353_19885	0.29	-1.9
4,371,112	-		AO353_19885	0.34	-0.1
4,371,131	+		AO353_19885	0.38	-1.5
4,371,132	-		AO353_19885	0.38	+0.7
4,371,132	-		AO353_19885	0.38	+1.9
4,371,132	-		AO353_19885	0.38	-0.2
4,371,132	-		AO353_19885	0.38	-1.5
4,371,203	+		AO353_19885	0.55	-2.6
4,371,204	-		AO353_19885	0.55	-0.9
4,371,204	-		AO353_19885	0.55	+1.0
4,371,204	-		AO353_19885	0.55	+1.2
4,371,206	+		AO353_19885	0.56	-0.5
4,371,206	+		AO353_19885	0.56	-0.1
4,371,206	+		AO353_19885	0.56	+1.7
4,371,336	-		AO353_19885	0.86	+0.5
4,371,347	-		AO353_19885	0.89	-1.1
4,371,471	+				-0.7
4,371,471	+				-0.4
4,371,471	+				+1.0
4,371,472	-				-0.4
4,371,472	-				-0.3
4,371,532	+				-1.3
4,371,532	+				-0.8
4,371,532	+				+0.7
4,371,533	-				-0.5
4,371,533	-				+0.5
4,371,533	-				-0.8
4,371,533	-				+0.2
4,371,533	-				+0.8
4,371,533	-				+0.1
4,371,533	-				+0.8
4,371,533	-				+1.4
4,371,533	-				-0.3
4,371,533	-				-0.0
4,371,592	+		AO353_19890	0.11	-1.8
4,371,592	+		AO353_19890	0.11	+1.2
4,371,593	-		AO353_19890	0.11	+0.6
4,371,632	-		AO353_19890	0.13	-0.0
4,371,863	+		AO353_19890	0.26	-1.3
4,371,863	+		AO353_19890	0.26	-1.1
4,371,863	+		AO353_19890	0.26	+2.2
4,371,863	+		AO353_19890	0.26	-3.1
4,371,863	+		AO353_19890	0.26	-0.3
4,371,863	+		AO353_19890	0.26	-1.1
4,371,864	-		AO353_19890	0.26	+2.0
4,371,864	-		AO353_19890	0.26	+0.1
4,371,864	-		AO353_19890	0.26	-0.7
4,371,865	+		AO353_19890	0.26	-0.7
4,371,964	+		AO353_19890	0.31	+1.3
4,371,965	-		AO353_19890	0.32	-1.9
4,371,994	-		AO353_19890	0.33	+0.2
4,372,157	+		AO353_19890	0.42	-0.4
4,372,157	+		AO353_19890	0.42	+0.8
4,372,157	+		AO353_19890	0.42	+0.1
4,372,158	-		AO353_19890	0.42	-0.3
4,372,652	+		AO353_19890	0.69	-0.6
4,372,672	+		AO353_19890	0.70	+0.3
4,372,672	+		AO353_19890	0.70	-1.0
4,372,672	+		AO353_19890	0.70	+0.5
4,372,673	-		AO353_19890	0.70	-1.3
4,372,673	-		AO353_19890	0.70	-1.1
4,372,673	-		AO353_19890	0.70	+0.7
4,372,673	-		AO353_19890	0.70	+0.2
4,372,673	-		AO353_19890	0.70	-1.0
4,372,673	-		AO353_19890	0.70	-1.0
4,372,673	-		AO353_19890	0.70	+1.7
4,373,104	+				+1.6
4,373,105	-				-1.5
4,373,105	-				-0.8
4,373,105	-				+1.0
4,373,105	-				+1.2
4,373,183	-				-1.3
4,373,304	+				+0.1
4,373,305	-				+0.3
4,373,500	+		AO353_19895	0.19	-0.5
4,373,500	+		AO353_19895	0.19	-0.8
4,373,501	-		AO353_19895	0.19	+0.3
4,373,501	-		AO353_19895	0.19	+0.8
4,373,501	-		AO353_19895	0.19	+0.9
4,373,514	+		AO353_19895	0.21	+1.1
4,373,515	-		AO353_19895	0.21	-0.9
4,373,594	+		AO353_19895	0.33	-0.3
4,373,669	+		AO353_19895	0.45	-1.6
4,373,669	+		AO353_19895	0.45	-0.5
4,373,713	+		AO353_19895	0.52	-0.4
4,373,714	-		AO353_19895	0.52	+0.7
4,373,714	-		AO353_19895	0.52	+1.5
4,373,714	-		AO353_19895	0.52	-0.6
4,373,714	-		AO353_19895	0.52	-0.5
4,373,714	-		AO353_19895	0.52	+0.3
4,373,714	-				+0.1
4,373,714	-		AO353_19895	0.52	+1.9
4,373,714	-		AO353_19895	0.52	+0.4
4,373,735	-		AO353_19895	0.55	-1.0
4,373,827	+		AO353_19895	0.69	-1.2
4,373,827	+		AO353_19895	0.69	+0.3
4,373,827	+		AO353_19895	0.69	-1.1
4,373,828	-		AO353_19895	0.70	+0.1
4,373,828	-		AO353_19895	0.70	+1.0
4,373,848	+		AO353_19895	0.73	-2.5
4,373,849	-		AO353_19895	0.73	-1.3
4,373,897	+		AO353_19895	0.80	-0.5
4,373,897	+		AO353_19895	0.80	-1.9
4,373,897	+		AO353_19895	0.80	-0.6
4,373,897	+		AO353_19895	0.80	+0.6
4,373,897	+		AO353_19895	0.80	+1.0
4,373,897	+		AO353_19895	0.80	-2.0
4,373,898	-		AO353_19895	0.80	-1.8
4,373,898	-		AO353_19895	0.80	+0.9
4,373,898	-		AO353_19895	0.80	-1.9
4,373,898	-		AO353_19895	0.80	+1.7
4,373,898	-		AO353_19895	0.80	-1.2
4,374,086	+				+1.3
4,374,094	+				+0.6
4,374,115	+				+0.2
4,374,184	+				+2.2