Experiment: Fusidic 0.125 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_07930 and AO353_07935 are separated by 294 nucleotides AO353_07935 and AO353_07940 are separated by 59 nucleotides AO353_07940 and AO353_07945 are separated by 34 nucleotides
AO353_07930: AO353_07930 - fructose-1,6-bisphosphate aldolase, at 1,748,729 to 1,749,793
_07930
AO353_07935: AO353_07935 - hypothetical protein, at 1,750,088 to 1,750,420
_07935
AO353_07940: AO353_07940 - hypothetical protein, at 1,750,480 to 1,750,701
_07940
AO353_07945: AO353_07945 - phosphoglycerate kinase, at 1,750,736 to 1,751,899
_07945
Position (kb)
1750
1751 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4 at 1749.856 kb on - strand at 1749.864 kb on + strand at 1749.865 kb on - strand at 1749.865 kb on - strand at 1749.903 kb on - strand at 1749.909 kb on + strand at 1749.909 kb on + strand at 1749.909 kb on + strand at 1749.909 kb on + strand at 1749.909 kb on + strand at 1749.909 kb on + strand at 1749.909 kb on + strand at 1749.909 kb on + strand at 1749.909 kb on + strand at 1749.909 kb on + strand at 1749.909 kb on + strand at 1749.909 kb on + strand at 1749.909 kb on + strand at 1749.909 kb on + strand at 1749.909 kb on + strand at 1749.909 kb on + strand at 1749.909 kb on + strand at 1749.910 kb on - strand at 1749.910 kb on - strand at 1749.910 kb on - strand at 1749.910 kb on - strand at 1749.910 kb on - strand at 1749.910 kb on - strand at 1749.910 kb on - strand at 1749.910 kb on - strand at 1749.910 kb on - strand at 1749.910 kb on - strand at 1749.910 kb on - strand at 1749.910 kb on - strand at 1749.910 kb on - strand at 1749.910 kb on - strand at 1749.923 kb on + strand at 1749.923 kb on + strand at 1749.977 kb on + strand at 1749.977 kb on + strand at 1750.089 kb on + strand at 1750.089 kb on + strand at 1750.089 kb on + strand at 1750.089 kb on + strand at 1750.090 kb on - strand at 1750.090 kb on - strand at 1750.090 kb on - strand at 1750.090 kb on - strand at 1750.090 kb on - strand at 1750.099 kb on + strand at 1750.100 kb on - strand at 1750.160 kb on + strand, within AO353_07935 at 1750.188 kb on + strand, within AO353_07935 at 1750.189 kb on - strand, within AO353_07935 at 1750.331 kb on - strand, within AO353_07935 at 1750.366 kb on + strand, within AO353_07935 at 1750.366 kb on + strand, within AO353_07935 at 1750.385 kb on + strand, within AO353_07935 at 1750.385 kb on + strand, within AO353_07935 at 1750.385 kb on + strand, within AO353_07935 at 1750.385 kb on + strand, within AO353_07935 at 1750.386 kb on - strand, within AO353_07935 at 1750.386 kb on - strand, within AO353_07935 at 1750.386 kb on - strand, within AO353_07935 at 1750.386 kb on - strand, within AO353_07935 at 1750.406 kb on + strand at 1750.520 kb on + strand, within AO353_07940 at 1750.521 kb on - strand, within AO353_07940 at 1750.521 kb on - strand, within AO353_07940 at 1750.521 kb on - strand, within AO353_07940 at 1750.524 kb on + strand, within AO353_07940 at 1750.524 kb on + strand, within AO353_07940 at 1750.592 kb on + strand, within AO353_07940 at 1750.663 kb on + strand, within AO353_07940 at 1750.663 kb on + strand, within AO353_07940 at 1750.663 kb on + strand, within AO353_07940 at 1750.703 kb on + strand at 1750.703 kb on + strand at 1750.703 kb on + strand at 1750.703 kb on + strand at 1750.703 kb on + strand at 1750.703 kb on + strand at 1750.703 kb on + strand at 1750.703 kb on + strand at 1750.703 kb on + strand at 1750.703 kb on + strand at 1750.703 kb on + strand at 1750.703 kb on + strand at 1750.703 kb on + strand at 1750.703 kb on + strand at 1750.704 kb on - strand at 1750.704 kb on - strand at 1750.704 kb on - strand at 1750.704 kb on - strand at 1750.704 kb on - strand at 1750.704 kb on - strand at 1750.704 kb on - strand at 1750.704 kb on - strand at 1750.704 kb on - strand at 1750.704 kb on - strand at 1750.704 kb on - strand at 1750.704 kb on - strand at 1750.704 kb on - strand at 1750.704 kb on - strand at 1750.704 kb on - strand at 1750.704 kb on - strand at 1750.737 kb on + strand at 1750.737 kb on + strand at 1750.851 kb on + strand at 1750.851 kb on + strand at 1750.851 kb on + strand at 1750.852 kb on - strand at 1750.852 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Fusidic 0.125 mg/ml remove 1,749,856 - +0.3 1,749,864 + +0.9 1,749,865 - +0.2 1,749,865 - -1.0 1,749,903 - +1.9 1,749,909 + +4.2 1,749,909 + +0.9 1,749,909 + +1.7 1,749,909 + +2.6 1,749,909 + +3.8 1,749,909 + +4.6 1,749,909 + +2.4 1,749,909 + -0.9 1,749,909 + +3.2 1,749,909 + +3.1 1,749,909 + +2.5 1,749,909 + +3.9 1,749,909 + +3.3 1,749,909 + +4.1 1,749,909 + +3.2 1,749,909 + +3.7 1,749,909 + +0.1 1,749,910 - -1.1 1,749,910 - -0.6 1,749,910 - -1.2 1,749,910 - -0.2 1,749,910 - -1.2 1,749,910 - -0.6 1,749,910 - +0.1 1,749,910 - -1.6 1,749,910 - -0.9 1,749,910 - -0.4 1,749,910 - +0.5 1,749,910 - +0.6 1,749,910 - -1.7 1,749,910 - -0.2 1,749,923 + +3.9 1,749,923 + +2.9 1,749,977 + +4.2 1,749,977 + +3.3 1,750,089 + +1.7 1,750,089 + +4.7 1,750,089 + +2.6 1,750,089 + +2.5 1,750,090 - -1.2 1,750,090 - +0.3 1,750,090 - +0.0 1,750,090 - -0.4 1,750,090 - +0.4 1,750,099 + +2.9 1,750,100 - +0.4 1,750,160 + AO353_07935 0.22 +1.7 1,750,188 + AO353_07935 0.30 +3.3 1,750,189 - AO353_07935 0.30 -0.6 1,750,331 - AO353_07935 0.73 +0.4 1,750,366 + AO353_07935 0.83 +3.3 1,750,366 + AO353_07935 0.83 +1.6 1,750,385 + AO353_07935 0.89 +2.7 1,750,385 + AO353_07935 0.89 +3.6 1,750,385 + AO353_07935 0.89 +3.1 1,750,385 + AO353_07935 0.89 +1.1 1,750,386 - AO353_07935 0.89 -0.1 1,750,386 - AO353_07935 0.89 -0.4 1,750,386 - AO353_07935 0.89 +0.5 1,750,386 - AO353_07935 0.89 -0.1 1,750,406 + +2.0 1,750,520 + AO353_07940 0.18 +1.9 1,750,521 - AO353_07940 0.18 -0.6 1,750,521 - AO353_07940 0.18 -0.9 1,750,521 - AO353_07940 0.18 -1.5 1,750,524 + AO353_07940 0.20 +2.0 1,750,524 + AO353_07940 0.20 +1.0 1,750,592 + AO353_07940 0.50 +1.8 1,750,663 + AO353_07940 0.82 +1.3 1,750,663 + AO353_07940 0.82 +2.6 1,750,663 + AO353_07940 0.82 +1.1 1,750,703 + +2.6 1,750,703 + +1.0 1,750,703 + -0.2 1,750,703 + +1.3 1,750,703 + +0.1 1,750,703 + +2.5 1,750,703 + +1.1 1,750,703 + +1.9 1,750,703 + +2.0 1,750,703 + +3.3 1,750,703 + +1.6 1,750,703 + +1.3 1,750,703 + +2.0 1,750,703 + +1.9 1,750,704 - -1.7 1,750,704 - -0.6 1,750,704 - +0.8 1,750,704 - +0.9 1,750,704 - -2.0 1,750,704 - -0.9 1,750,704 - -0.8 1,750,704 - -1.3 1,750,704 - +1.2 1,750,704 - +0.4 1,750,704 - -0.2 1,750,704 - -1.6 1,750,704 - +0.4 1,750,704 - -1.9 1,750,704 - -2.1 1,750,704 - +0.4 1,750,737 + +1.1 1,750,737 + +0.1 1,750,851 + +0.7 1,750,851 + -0.2 1,750,851 + -0.9 1,750,852 - +0.7 1,750,852 - -0.6
Or see this region's nucleotide sequence