Experiment: Fusidic 0.125 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_06475 and AO353_06480 are separated by 12 nucleotides AO353_06480 and AO353_06485 are separated by 9 nucleotides AO353_06485 and AO353_06490 are separated by 73 nucleotides
AO353_06475: AO353_06475 - penicillin-binding protein 2, at 1,442,475 to 1,444,370
_06475
AO353_06480: AO353_06480 - 50S rRNA methyltransferase, at 1,444,383 to 1,444,850
_06480
AO353_06485: AO353_06485 - ribosome silencing factor, at 1,444,860 to 1,445,354
_06485
AO353_06490: AO353_06490 - nicotinate-nucleotide adenylyltransferase, at 1,445,428 to 1,446,117
_06490
Position (kb)
1444
1445 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 1444.385 kb on - strand at 1444.385 kb on - strand at 1444.385 kb on - strand at 1444.385 kb on - strand at 1444.385 kb on - strand at 1444.385 kb on - strand at 1444.385 kb on - strand at 1444.385 kb on - strand at 1444.385 kb on - strand at 1444.385 kb on - strand at 1444.394 kb on - strand at 1444.427 kb on - strand at 1444.427 kb on - strand at 1444.427 kb on - strand at 1444.427 kb on - strand at 1444.784 kb on - strand, within AO353_06480 at 1444.784 kb on - strand, within AO353_06480 at 1444.784 kb on - strand, within AO353_06480 at 1444.784 kb on - strand, within AO353_06480 at 1444.784 kb on - strand, within AO353_06480 at 1444.784 kb on - strand, within AO353_06480 at 1445.329 kb on - strand at 1445.375 kb on - strand at 1445.375 kb on - strand at 1445.375 kb on - strand at 1445.375 kb on - strand at 1445.375 kb on - strand at 1445.375 kb on - strand at 1445.375 kb on - strand at 1445.393 kb on - strand at 1445.393 kb on - strand at 1445.393 kb on - strand at 1445.393 kb on - strand at 1445.426 kb on - strand at 1445.426 kb on - strand at 1445.426 kb on - strand at 1445.426 kb on - strand at 1445.445 kb on - strand at 1445.466 kb on - strand at 1445.466 kb on - strand at 1445.466 kb on - strand at 1445.466 kb on - strand at 1445.506 kb on - strand, within AO353_06490 at 1445.506 kb on - strand, within AO353_06490 at 1445.822 kb on + strand, within AO353_06490 at 1445.823 kb on - strand, within AO353_06490 at 1445.823 kb on - strand, within AO353_06490 at 1445.823 kb on - strand, within AO353_06490 at 1445.823 kb on - strand, within AO353_06490 at 1445.823 kb on - strand, within AO353_06490 at 1445.823 kb on - strand, within AO353_06490
Per-strain Table
Position Strand Gene LocusTag Fraction Fusidic 0.125 mg/ml remove 1,444,385 - +2.6 1,444,385 - +1.9 1,444,385 - +3.5 1,444,385 - +2.0 1,444,385 - +1.8 1,444,385 - +1.7 1,444,385 - +2.0 1,444,385 - +2.1 1,444,385 - +2.2 1,444,385 - +2.1 1,444,394 - -0.1 1,444,427 - -1.3 1,444,427 - +0.1 1,444,427 - -0.5 1,444,427 - -2.3 1,444,784 - AO353_06480 0.86 +0.5 1,444,784 - AO353_06480 0.86 -0.5 1,444,784 - AO353_06480 0.86 -1.5 1,444,784 - AO353_06480 0.86 -1.2 1,444,784 - AO353_06480 0.86 +0.8 1,444,784 - AO353_06480 0.86 -1.4 1,445,329 - +1.9 1,445,375 - +0.6 1,445,375 - -0.5 1,445,375 - -1.2 1,445,375 - +0.5 1,445,375 - -1.7 1,445,375 - -0.6 1,445,375 - +0.5 1,445,393 - -1.8 1,445,393 - +0.9 1,445,393 - +0.4 1,445,393 - +0.6 1,445,426 - +1.5 1,445,426 - -1.2 1,445,426 - +0.1 1,445,426 - +1.2 1,445,445 - +1.5 1,445,466 - +1.1 1,445,466 - +0.1 1,445,466 - +2.4 1,445,466 - +0.3 1,445,506 - AO353_06490 0.11 +2.4 1,445,506 - AO353_06490 0.11 +2.8 1,445,822 + AO353_06490 0.57 -0.2 1,445,823 - AO353_06490 0.57 +0.8 1,445,823 - AO353_06490 0.57 +0.8 1,445,823 - AO353_06490 0.57 +0.1 1,445,823 - AO353_06490 0.57 -1.2 1,445,823 - AO353_06490 0.57 +0.9 1,445,823 - AO353_06490 0.57 -0.5
Or see this region's nucleotide sequence