Experiment: Fusidic 0.125 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_05595 and AO353_05600 are separated by 16 nucleotides AO353_05600 and AO353_05605 are separated by 8 nucleotides AO353_05605 and AO353_05610 are separated by 190 nucleotides AO353_05610 and AO353_05615 are separated by 106 nucleotides
AO353_05595: AO353_05595 - phosphoglucosamine mutase, at 1,235,503 to 1,236,840
_05595
AO353_05600: AO353_05600 - dihydropteroate synthase, at 1,236,857 to 1,237,708
_05600
AO353_05605: AO353_05605 - ATP-dependent metalloprotease, at 1,237,717 to 1,239,618
_05605
AO353_05610: AO353_05610 - 23S rRNA methyltransferase, at 1,239,809 to 1,240,459
_05610
AO353_05615: AO353_05615 - RNA-binding protein, at 1,240,566 to 1,240,874
_05615
Position (kb)
1237
1238
1239
1240 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 1236.841 kb on - strand at 1236.841 kb on - strand at 1236.841 kb on - strand at 1236.859 kb on - strand at 1237.698 kb on - strand at 1237.698 kb on - strand at 1237.698 kb on - strand at 1237.698 kb on - strand at 1237.698 kb on - strand at 1237.698 kb on - strand at 1237.698 kb on - strand at 1237.719 kb on - strand at 1237.719 kb on - strand at 1237.719 kb on - strand at 1237.719 kb on - strand at 1237.719 kb on - strand at 1239.630 kb on - strand at 1239.630 kb on - strand at 1239.630 kb on - strand at 1239.630 kb on - strand at 1239.630 kb on - strand at 1239.630 kb on - strand at 1239.630 kb on - strand at 1239.630 kb on - strand at 1239.630 kb on - strand at 1239.630 kb on - strand at 1239.630 kb on - strand at 1239.634 kb on - strand at 1239.690 kb on - strand at 1239.695 kb on - strand at 1239.695 kb on - strand at 1239.695 kb on - strand at 1239.695 kb on - strand at 1239.695 kb on - strand at 1239.695 kb on - strand at 1239.695 kb on - strand at 1239.698 kb on - strand at 1239.698 kb on - strand at 1239.698 kb on - strand at 1239.698 kb on - strand at 1239.698 kb on - strand at 1239.698 kb on - strand at 1239.698 kb on - strand at 1239.703 kb on - strand at 1239.703 kb on - strand at 1239.703 kb on - strand at 1239.703 kb on - strand at 1239.703 kb on - strand at 1239.703 kb on - strand at 1239.707 kb on - strand at 1239.707 kb on - strand at 1239.753 kb on - strand at 1239.760 kb on - strand at 1239.760 kb on - strand at 1239.760 kb on - strand at 1239.780 kb on - strand at 1239.800 kb on - strand at 1239.800 kb on - strand at 1240.478 kb on - strand at 1240.493 kb on - strand at 1240.540 kb on - strand at 1240.566 kb on - strand at 1240.566 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Fusidic 0.125 mg/ml remove 1,236,841 - +0.8 1,236,841 - -0.5 1,236,841 - -0.1 1,236,859 - +0.2 1,237,698 - -1.6 1,237,698 - -1.8 1,237,698 - +1.1 1,237,698 - +0.3 1,237,698 - -0.6 1,237,698 - -1.4 1,237,698 - -0.5 1,237,719 - +0.2 1,237,719 - +0.1 1,237,719 - -0.2 1,237,719 - -0.1 1,237,719 - -0.3 1,239,630 - -1.0 1,239,630 - -0.9 1,239,630 - -1.9 1,239,630 - -0.0 1,239,630 - -1.1 1,239,630 - -1.4 1,239,630 - +0.2 1,239,630 - +1.2 1,239,630 - +1.1 1,239,630 - -1.1 1,239,630 - -2.7 1,239,634 - +0.5 1,239,690 - +0.1 1,239,695 - -1.5 1,239,695 - +0.3 1,239,695 - +0.6 1,239,695 - +2.1 1,239,695 - -0.4 1,239,695 - +0.1 1,239,695 - -0.5 1,239,698 - +1.7 1,239,698 - +1.1 1,239,698 - -0.1 1,239,698 - -1.4 1,239,698 - -0.0 1,239,698 - -1.2 1,239,698 - +0.1 1,239,703 - -0.9 1,239,703 - -1.0 1,239,703 - +0.8 1,239,703 - +0.1 1,239,703 - +0.5 1,239,703 - +0.2 1,239,707 - -1.5 1,239,707 - +0.7 1,239,753 - +2.5 1,239,760 - +3.1 1,239,760 - -1.2 1,239,760 - +2.1 1,239,780 - +0.1 1,239,800 - -1.5 1,239,800 - -0.7 1,240,478 - +0.0 1,240,493 - +1.5 1,240,540 - -0.5 1,240,566 - +0.2 1,240,566 - +1.1
Or see this region's nucleotide sequence