Experiment: Fusidic 0.125 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_04485 and AO353_04490 are separated by 286 nucleotides AO353_04490 and AO353_04495 are separated by 124 nucleotides AO353_04495 and AO353_04500 are separated by 49 nucleotides
AO353_04485: AO353_04485 - phosphoribosylformylglycinamidine synthase, at 964,756 to 968,652
_04485
AO353_04490: AO353_04490 - murein transglycosylase, at 968,939 to 970,399
_04490
AO353_04495: AO353_04495 - pyridoxine 5'-phosphate synthase, at 970,524 to 971,267
_04495
AO353_04500: AO353_04500 - DNA repair protein RecO, at 971,317 to 972,006
_04500
Position (kb)
968
969
970
971 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 968.734 kb on - strand at 968.811 kb on - strand at 968.877 kb on + strand at 968.877 kb on + strand at 968.877 kb on + strand at 968.894 kb on - strand at 968.927 kb on + strand at 968.927 kb on + strand at 968.927 kb on + strand at 968.927 kb on + strand at 968.927 kb on + strand at 968.928 kb on - strand at 968.928 kb on - strand at 968.928 kb on - strand at 968.929 kb on + strand at 968.929 kb on + strand at 969.025 kb on + strand at 969.026 kb on - strand at 969.026 kb on - strand at 969.026 kb on - strand at 969.094 kb on + strand, within AO353_04490 at 969.098 kb on + strand, within AO353_04490 at 969.098 kb on + strand, within AO353_04490 at 969.098 kb on + strand, within AO353_04490 at 969.098 kb on + strand, within AO353_04490 at 969.098 kb on + strand, within AO353_04490 at 969.098 kb on + strand, within AO353_04490 at 969.098 kb on + strand, within AO353_04490 at 969.099 kb on - strand, within AO353_04490 at 969.099 kb on - strand, within AO353_04490 at 969.134 kb on + strand, within AO353_04490 at 969.134 kb on + strand, within AO353_04490 at 969.135 kb on - strand, within AO353_04490 at 969.308 kb on + strand, within AO353_04490 at 969.308 kb on + strand, within AO353_04490 at 969.308 kb on + strand, within AO353_04490 at 969.308 kb on + strand, within AO353_04490 at 969.309 kb on - strand, within AO353_04490 at 969.335 kb on + strand, within AO353_04490 at 969.335 kb on + strand, within AO353_04490 at 969.335 kb on + strand, within AO353_04490 at 969.335 kb on + strand, within AO353_04490 at 969.336 kb on - strand, within AO353_04490 at 969.336 kb on - strand, within AO353_04490 at 969.446 kb on + strand, within AO353_04490 at 969.446 kb on + strand, within AO353_04490 at 969.447 kb on - strand, within AO353_04490 at 969.447 kb on - strand, within AO353_04490 at 969.569 kb on + strand, within AO353_04490 at 969.569 kb on + strand, within AO353_04490 at 969.569 kb on + strand, within AO353_04490 at 969.569 kb on + strand, within AO353_04490 at 969.569 kb on + strand, within AO353_04490 at 969.570 kb on - strand, within AO353_04490 at 969.570 kb on - strand, within AO353_04490 at 969.570 kb on - strand, within AO353_04490 at 969.570 kb on - strand, within AO353_04490 at 969.577 kb on + strand, within AO353_04490 at 969.577 kb on + strand, within AO353_04490 at 969.577 kb on + strand, within AO353_04490 at 969.725 kb on + strand, within AO353_04490 at 969.726 kb on - strand, within AO353_04490 at 969.726 kb on - strand, within AO353_04490 at 969.726 kb on - strand, within AO353_04490 at 969.744 kb on + strand, within AO353_04490 at 969.745 kb on - strand, within AO353_04490 at 969.752 kb on + strand, within AO353_04490 at 969.753 kb on - strand, within AO353_04490 at 969.764 kb on + strand, within AO353_04490 at 969.765 kb on - strand, within AO353_04490 at 969.765 kb on - strand, within AO353_04490 at 969.803 kb on + strand, within AO353_04490 at 969.803 kb on + strand, within AO353_04490 at 969.804 kb on - strand, within AO353_04490 at 970.022 kb on + strand, within AO353_04490 at 970.022 kb on + strand, within AO353_04490 at 970.022 kb on + strand, within AO353_04490 at 970.022 kb on + strand, within AO353_04490 at 970.023 kb on - strand, within AO353_04490 at 970.023 kb on - strand, within AO353_04490 at 970.023 kb on - strand, within AO353_04490 at 970.023 kb on - strand, within AO353_04490 at 970.089 kb on - strand, within AO353_04490 at 970.089 kb on - strand, within AO353_04490 at 970.089 kb on - strand, within AO353_04490 at 970.208 kb on + strand, within AO353_04490 at 970.208 kb on + strand, within AO353_04490 at 970.224 kb on - strand, within AO353_04490 at 970.277 kb on + strand at 970.278 kb on - strand at 970.278 kb on - strand at 970.280 kb on + strand at 970.280 kb on + strand at 970.280 kb on + strand at 970.280 kb on + strand at 970.397 kb on + strand at 970.398 kb on - strand at 971.307 kb on + strand at 971.307 kb on + strand at 971.308 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Fusidic 0.125 mg/ml remove 968,734 - +2.0 968,811 - -0.2 968,877 + -0.8 968,877 + -0.7 968,877 + +1.6 968,894 - -1.2 968,927 + -0.6 968,927 + -1.3 968,927 + -0.9 968,927 + -1.1 968,927 + -0.2 968,928 - -1.3 968,928 - +0.2 968,928 - -0.2 968,929 + -0.2 968,929 + -1.5 969,025 + -1.0 969,026 - -0.8 969,026 - -0.0 969,026 - -2.0 969,094 + AO353_04490 0.11 -2.3 969,098 + AO353_04490 0.11 +0.4 969,098 + AO353_04490 0.11 -1.5 969,098 + AO353_04490 0.11 -0.3 969,098 + AO353_04490 0.11 -1.7 969,098 + AO353_04490 0.11 -1.2 969,098 + AO353_04490 0.11 -0.8 969,098 + AO353_04490 0.11 -1.0 969,099 - AO353_04490 0.11 -3.5 969,099 - AO353_04490 0.11 -1.0 969,134 + AO353_04490 0.13 -1.8 969,134 + AO353_04490 0.13 -2.4 969,135 - AO353_04490 0.13 -0.8 969,308 + AO353_04490 0.25 -0.8 969,308 + AO353_04490 0.25 -1.3 969,308 + AO353_04490 0.25 -2.2 969,308 + AO353_04490 0.25 -1.0 969,309 - AO353_04490 0.25 -2.1 969,335 + AO353_04490 0.27 -1.5 969,335 + AO353_04490 0.27 +0.2 969,335 + AO353_04490 0.27 -1.3 969,335 + AO353_04490 0.27 -0.4 969,336 - AO353_04490 0.27 -1.0 969,336 - AO353_04490 0.27 -1.3 969,446 + AO353_04490 0.35 -2.3 969,446 + AO353_04490 0.35 -1.1 969,447 - AO353_04490 0.35 -2.5 969,447 - AO353_04490 0.35 -0.6 969,569 + AO353_04490 0.43 -1.1 969,569 + AO353_04490 0.43 -1.3 969,569 + AO353_04490 0.43 -0.9 969,569 + AO353_04490 0.43 -1.7 969,569 + AO353_04490 0.43 -0.6 969,570 - AO353_04490 0.43 -0.3 969,570 - AO353_04490 0.43 -2.7 969,570 - AO353_04490 0.43 -2.3 969,570 - AO353_04490 0.43 -2.0 969,577 + AO353_04490 0.44 +1.0 969,577 + AO353_04490 0.44 -1.0 969,577 + AO353_04490 0.44 -0.7 969,725 + AO353_04490 0.54 -0.6 969,726 - AO353_04490 0.54 +1.2 969,726 - AO353_04490 0.54 -1.3 969,726 - AO353_04490 0.54 -1.5 969,744 + AO353_04490 0.55 -1.0 969,745 - AO353_04490 0.55 -2.1 969,752 + AO353_04490 0.56 -3.3 969,753 - AO353_04490 0.56 -1.2 969,764 + AO353_04490 0.56 -1.7 969,765 - AO353_04490 0.57 -1.7 969,765 - AO353_04490 0.57 -1.9 969,803 + AO353_04490 0.59 -0.0 969,803 + AO353_04490 0.59 -0.6 969,804 - AO353_04490 0.59 -0.5 970,022 + AO353_04490 0.74 -2.3 970,022 + AO353_04490 0.74 +0.4 970,022 + AO353_04490 0.74 -2.9 970,022 + AO353_04490 0.74 -2.3 970,023 - AO353_04490 0.74 -1.0 970,023 - AO353_04490 0.74 -1.0 970,023 - AO353_04490 0.74 -1.2 970,023 - AO353_04490 0.74 -0.0 970,089 - AO353_04490 0.79 -1.2 970,089 - AO353_04490 0.79 -1.3 970,089 - AO353_04490 0.79 -2.2 970,208 + AO353_04490 0.87 -1.6 970,208 + AO353_04490 0.87 -2.1 970,224 - AO353_04490 0.88 -1.6 970,277 + -0.3 970,278 - -0.7 970,278 - -1.0 970,280 + -0.6 970,280 + -0.6 970,280 + -1.1 970,280 + -1.5 970,397 + -2.2 970,398 - +1.6 971,307 + +1.2 971,307 + -1.2 971,308 - -1.8
Or see this region's nucleotide sequence