Experiment: Fusidic 0.125 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_04305 and AO353_04310 are separated by 484 nucleotides AO353_04310 and AO353_04315 are separated by 186 nucleotides
AO353_04305: AO353_04305 - hypothetical protein, at 927,147 to 927,332
_04305
AO353_04310: AO353_04310 - glucan biosynthesis protein D, at 927,817 to 929,451
_04310
AO353_04315: AO353_04315 - oxidoreductase, at 929,638 to 930,744
_04315
Position (kb) 927
928
929
930 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 926.838 kb on + strand at 926.838 kb on + strand at 926.838 kb on + strand at 926.838 kb on + strand at 926.838 kb on + strand at 926.838 kb on + strand at 926.838 kb on + strand at 926.838 kb on + strand at 926.839 kb on - strand at 926.839 kb on - strand at 926.839 kb on - strand at 926.839 kb on - strand at 926.839 kb on - strand at 926.839 kb on - strand at 926.953 kb on + strand at 926.953 kb on + strand at 926.953 kb on + strand at 926.953 kb on + strand at 926.953 kb on + strand at 926.953 kb on + strand at 926.954 kb on - strand at 926.954 kb on - strand at 926.954 kb on - strand at 926.954 kb on - strand at 926.954 kb on - strand at 926.954 kb on - strand at 927.004 kb on + strand at 927.005 kb on - strand at 927.031 kb on + strand at 927.031 kb on + strand at 927.053 kb on + strand at 927.053 kb on + strand at 927.054 kb on - strand at 927.184 kb on + strand, within AO353_04305 at 927.370 kb on + strand at 927.370 kb on + strand at 927.370 kb on + strand at 927.370 kb on + strand at 927.371 kb on - strand at 927.371 kb on - strand at 927.371 kb on - strand at 927.371 kb on - strand at 927.371 kb on - strand at 927.371 kb on - strand at 927.371 kb on - strand at 927.371 kb on - strand at 927.371 kb on - strand at 927.371 kb on - strand at 927.467 kb on + strand at 927.467 kb on + strand at 927.468 kb on - strand at 927.473 kb on + strand at 927.474 kb on - strand at 927.505 kb on - strand at 927.510 kb on - strand at 927.510 kb on - strand at 927.510 kb on - strand at 927.514 kb on - strand at 927.514 kb on - strand at 927.521 kb on + strand at 927.536 kb on - strand at 927.536 kb on - strand at 927.536 kb on - strand at 927.536 kb on - strand at 927.536 kb on - strand at 927.572 kb on + strand at 927.573 kb on - strand at 927.593 kb on + strand at 927.593 kb on + strand at 927.593 kb on + strand at 927.594 kb on - strand at 927.594 kb on - strand at 927.594 kb on - strand at 927.619 kb on + strand at 927.619 kb on + strand at 927.619 kb on + strand at 927.620 kb on - strand at 927.620 kb on - strand at 927.620 kb on - strand at 927.669 kb on + strand at 927.669 kb on + strand at 927.669 kb on + strand at 927.670 kb on - strand at 927.670 kb on - strand at 927.684 kb on + strand at 927.685 kb on - strand at 927.685 kb on - strand at 927.699 kb on - strand at 927.699 kb on - strand at 927.699 kb on - strand at 927.703 kb on + strand at 927.703 kb on + strand at 927.703 kb on + strand at 927.704 kb on - strand at 927.704 kb on - strand at 927.704 kb on - strand at 927.718 kb on + strand at 927.718 kb on + strand at 927.719 kb on - strand at 927.719 kb on - strand at 927.816 kb on + strand at 927.817 kb on - strand at 927.817 kb on - strand at 927.863 kb on - strand at 927.988 kb on + strand, within AO353_04310 at 927.989 kb on - strand, within AO353_04310 at 928.060 kb on + strand, within AO353_04310 at 928.156 kb on + strand, within AO353_04310 at 928.156 kb on + strand, within AO353_04310 at 928.156 kb on + strand, within AO353_04310 at 928.157 kb on - strand, within AO353_04310 at 928.157 kb on - strand, within AO353_04310 at 928.157 kb on - strand, within AO353_04310 at 928.157 kb on - strand, within AO353_04310 at 928.157 kb on - strand, within AO353_04310 at 928.219 kb on + strand, within AO353_04310 at 928.219 kb on + strand, within AO353_04310 at 928.219 kb on + strand, within AO353_04310 at 928.220 kb on - strand, within AO353_04310 at 928.220 kb on - strand, within AO353_04310 at 928.220 kb on - strand, within AO353_04310 at 928.220 kb on - strand, within AO353_04310 at 928.220 kb on - strand, within AO353_04310 at 928.220 kb on - strand, within AO353_04310 at 928.339 kb on + strand, within AO353_04310 at 928.339 kb on + strand, within AO353_04310 at 928.339 kb on + strand, within AO353_04310 at 928.339 kb on + strand, within AO353_04310 at 928.340 kb on - strand, within AO353_04310 at 928.340 kb on - strand, within AO353_04310 at 928.370 kb on - strand, within AO353_04310 at 928.405 kb on + strand, within AO353_04310 at 928.406 kb on - strand, within AO353_04310 at 928.406 kb on - strand, within AO353_04310 at 928.489 kb on + strand, within AO353_04310 at 928.489 kb on + strand, within AO353_04310 at 928.489 kb on + strand, within AO353_04310 at 928.489 kb on + strand, within AO353_04310 at 928.489 kb on + strand, within AO353_04310 at 928.490 kb on - strand, within AO353_04310 at 928.490 kb on - strand, within AO353_04310 at 928.490 kb on - strand, within AO353_04310 at 928.526 kb on - strand, within AO353_04310 at 928.840 kb on + strand, within AO353_04310 at 928.840 kb on + strand, within AO353_04310 at 928.840 kb on + strand, within AO353_04310 at 928.840 kb on + strand, within AO353_04310 at 928.840 kb on + strand, within AO353_04310 at 928.840 kb on + strand, within AO353_04310 at 928.840 kb on + strand, within AO353_04310 at 928.841 kb on - strand, within AO353_04310 at 928.841 kb on - strand, within AO353_04310 at 928.841 kb on - strand, within AO353_04310 at 928.841 kb on - strand, within AO353_04310 at 928.861 kb on + strand, within AO353_04310 at 928.862 kb on - strand, within AO353_04310 at 929.017 kb on + strand, within AO353_04310 at 929.017 kb on + strand, within AO353_04310 at 929.017 kb on + strand, within AO353_04310 at 929.024 kb on - strand, within AO353_04310 at 929.033 kb on - strand, within AO353_04310 at 929.033 kb on - strand, within AO353_04310 at 929.392 kb on + strand at 929.393 kb on - strand at 929.393 kb on - strand at 929.393 kb on - strand at 929.393 kb on - strand at 929.398 kb on + strand at 929.399 kb on - strand at 929.399 kb on - strand at 929.399 kb on - strand at 929.399 kb on - strand at 929.399 kb on - strand at 929.399 kb on - strand at 929.399 kb on - strand at 929.428 kb on + strand at 929.449 kb on + strand at 929.449 kb on + strand at 929.449 kb on + strand at 929.450 kb on - strand at 929.450 kb on - strand at 929.450 kb on - strand at 929.454 kb on + strand at 929.454 kb on + strand at 929.454 kb on + strand at 929.454 kb on + strand at 929.454 kb on + strand at 929.454 kb on + strand at 929.454 kb on + strand at 929.454 kb on + strand at 929.454 kb on + strand at 929.454 kb on + strand at 929.454 kb on + strand at 929.454 kb on + strand at 929.454 kb on + strand at 929.455 kb on - strand at 929.455 kb on - strand at 929.455 kb on - strand at 929.455 kb on - strand at 929.455 kb on - strand at 929.455 kb on - strand at 929.455 kb on - strand at 929.455 kb on - strand at 929.455 kb on - strand at 929.455 kb on - strand at 929.498 kb on + strand at 929.498 kb on + strand at 929.507 kb on + strand at 929.508 kb on - strand at 929.508 kb on - strand at 929.532 kb on - strand at 929.532 kb on - strand at 929.693 kb on + strand at 929.693 kb on + strand at 929.753 kb on + strand, within AO353_04315 at 930.004 kb on + strand, within AO353_04315 at 930.004 kb on + strand, within AO353_04315 at 930.004 kb on + strand, within AO353_04315 at 930.200 kb on + strand, within AO353_04315 at 930.201 kb on - strand, within AO353_04315
Per-strain Table
Position Strand Gene LocusTag Fraction Fusidic 0.125 mg/ml remove 926,838 + +1.0 926,838 + -1.3 926,838 + +1.0 926,838 + +0.8 926,838 + +0.3 926,838 + +2.1 926,838 + -0.4 926,838 + +0.2 926,839 - +1.2 926,839 - +1.2 926,839 - -2.3 926,839 - -0.3 926,839 - +2.7 926,839 - -0.3 926,953 + +0.5 926,953 + +0.5 926,953 + -1.8 926,953 + +0.4 926,953 + -0.2 926,953 + +0.3 926,954 - +1.0 926,954 - -3.1 926,954 - -1.0 926,954 - -0.3 926,954 - +0.4 926,954 - +0.1 927,004 + -1.2 927,005 - +0.3 927,031 + -0.5 927,031 + -0.5 927,053 + -0.6 927,053 + -0.0 927,054 - +1.0 927,184 + AO353_04305 0.20 +0.4 927,370 + -1.0 927,370 + -0.0 927,370 + +1.1 927,370 + -0.8 927,371 - +0.6 927,371 - +0.9 927,371 - +0.4 927,371 - -0.8 927,371 - +0.2 927,371 - -0.3 927,371 - -0.4 927,371 - +1.0 927,371 - +1.0 927,371 - +0.1 927,467 + -1.9 927,467 + -2.0 927,468 - -1.0 927,473 + -1.3 927,474 - +1.2 927,505 - -0.3 927,510 - -1.3 927,510 - -0.5 927,510 - +0.3 927,514 - +0.3 927,514 - +0.4 927,521 + -0.4 927,536 - +1.7 927,536 - +0.9 927,536 - -0.3 927,536 - -0.1 927,536 - +0.0 927,572 + +0.1 927,573 - +0.8 927,593 + -0.5 927,593 + -0.8 927,593 + +0.9 927,594 - -0.8 927,594 - -0.6 927,594 - +1.5 927,619 + -1.0 927,619 + +0.3 927,619 + -0.8 927,620 - -0.2 927,620 - +0.4 927,620 - -1.3 927,669 + +0.6 927,669 + +0.1 927,669 + -0.6 927,670 - +1.5 927,670 - +0.6 927,684 + -2.6 927,685 - -0.3 927,685 - -0.0 927,699 - +1.4 927,699 - -0.0 927,699 - +2.2 927,703 + +0.4 927,703 + +0.3 927,703 + -0.8 927,704 - -0.3 927,704 - -0.0 927,704 - -1.6 927,718 + -0.7 927,718 + +0.2 927,719 - +1.0 927,719 - +0.4 927,816 + +0.8 927,817 - -2.3 927,817 - +0.4 927,863 - -0.3 927,988 + AO353_04310 0.10 +0.6 927,989 - AO353_04310 0.11 +0.5 928,060 + AO353_04310 0.15 +0.3 928,156 + AO353_04310 0.21 +0.1 928,156 + AO353_04310 0.21 +0.7 928,156 + AO353_04310 0.21 -0.8 928,157 - AO353_04310 0.21 +0.7 928,157 - AO353_04310 0.21 -0.8 928,157 - AO353_04310 0.21 +2.0 928,157 - AO353_04310 0.21 -1.2 928,157 - AO353_04310 0.21 -0.6 928,219 + AO353_04310 0.25 +0.6 928,219 + AO353_04310 0.25 -1.2 928,219 + AO353_04310 0.25 -0.5 928,220 - AO353_04310 0.25 +0.2 928,220 - AO353_04310 0.25 +1.9 928,220 - AO353_04310 0.25 -1.2 928,220 - AO353_04310 0.25 -0.0 928,220 - AO353_04310 0.25 +1.1 928,220 - AO353_04310 0.25 -0.2 928,339 + AO353_04310 0.32 -1.9 928,339 + AO353_04310 0.32 -0.3 928,339 + AO353_04310 0.32 +1.3 928,339 + AO353_04310 0.32 +0.9 928,340 - AO353_04310 0.32 +0.8 928,340 - AO353_04310 0.32 +0.4 928,370 - AO353_04310 0.34 -2.9 928,405 + AO353_04310 0.36 +0.9 928,406 - AO353_04310 0.36 -0.7 928,406 - AO353_04310 0.36 +1.5 928,489 + AO353_04310 0.41 +1.0 928,489 + AO353_04310 0.41 -0.1 928,489 + AO353_04310 0.41 -1.7 928,489 + AO353_04310 0.41 -1.0 928,489 + AO353_04310 0.41 -0.9 928,490 - AO353_04310 0.41 +0.1 928,490 - AO353_04310 0.41 +1.9 928,490 - AO353_04310 0.41 +0.7 928,526 - AO353_04310 0.43 +1.6 928,840 + AO353_04310 0.63 -0.8 928,840 + AO353_04310 0.63 +0.7 928,840 + AO353_04310 0.63 -0.0 928,840 + AO353_04310 0.63 +0.4 928,840 + AO353_04310 0.63 +0.2 928,840 + AO353_04310 0.63 -0.6 928,840 + AO353_04310 0.63 +1.4 928,841 - AO353_04310 0.63 +1.6 928,841 - AO353_04310 0.63 -0.0 928,841 - AO353_04310 0.63 +0.7 928,841 - AO353_04310 0.63 +0.8 928,861 + AO353_04310 0.64 -0.3 928,862 - AO353_04310 0.64 +1.6 929,017 + AO353_04310 0.73 -2.3 929,017 + AO353_04310 0.73 +1.8 929,017 + AO353_04310 0.73 +0.7 929,024 - AO353_04310 0.74 -0.0 929,033 - AO353_04310 0.74 +1.1 929,033 - AO353_04310 0.74 -0.8 929,392 + +0.3 929,393 - -0.2 929,393 - -0.7 929,393 - +0.5 929,393 - -0.0 929,398 + +0.1 929,399 - -0.2 929,399 - +0.9 929,399 - +1.6 929,399 - -0.4 929,399 - -1.3 929,399 - -0.3 929,399 - +0.6 929,428 + +0.8 929,449 + +0.5 929,449 + -0.8 929,449 + +0.1 929,450 - +0.5 929,450 - +0.2 929,450 - +1.0 929,454 + -1.2 929,454 + +1.2 929,454 + -0.3 929,454 + -0.2 929,454 + +0.6 929,454 + -0.3 929,454 + +1.2 929,454 + +0.2 929,454 + -0.9 929,454 + +0.3 929,454 + -0.3 929,454 + -0.6 929,454 + -0.2 929,455 - +0.6 929,455 - -1.7 929,455 - -1.2 929,455 - -2.2 929,455 - +1.0 929,455 - -0.3 929,455 - +0.3 929,455 - +0.7 929,455 - -0.1 929,455 - -1.3 929,498 + -1.8 929,498 + +0.8 929,507 + +0.0 929,508 - -1.0 929,508 - +0.4 929,532 - -0.8 929,532 - +1.2 929,693 + -0.3 929,693 + +0.4 929,753 + AO353_04315 0.10 +0.8 930,004 + AO353_04315 0.33 +0.6 930,004 + AO353_04315 0.33 -1.2 930,004 + AO353_04315 0.33 -0.6 930,200 + AO353_04315 0.51 +0.2 930,201 - AO353_04315 0.51 +0.6
Or see this region's nucleotide sequence