Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_03590

Experiment: Fusidic 0.125 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAO353_03580 and AO353_03585 are separated by 0 nucleotidesAO353_03585 and AO353_03590 are separated by 118 nucleotidesAO353_03590 and AO353_03595 are separated by 203 nucleotides AO353_03580: AO353_03580 - ATP-dependent DNA helicase RuvB, at 764,872 to 765,933 _03580 AO353_03585: AO353_03585 - ATP-dependent DNA helicase RuvA, at 765,934 to 766,542 _03585 AO353_03590: AO353_03590 - crossover junction endodeoxyribonuclease RuvC, at 766,661 to 767,185 _03590 AO353_03595: AO353_03595 - hypothetical protein, at 767,389 to 768,135 _03595 Position (kb) 766 767 768Strain fitness (log2 ratio) -2 -1 0 1at 765.836 kb on + strandat 765.837 kb on - strandat 765.935 kb on + strandat 765.936 kb on - strandat 765.936 kb on - strandat 766.480 kb on + strand, within AO353_03585at 766.480 kb on + strand, within AO353_03585at 766.480 kb on + strand, within AO353_03585at 766.480 kb on + strand, within AO353_03585at 766.481 kb on - strand, within AO353_03585at 766.481 kb on - strand, within AO353_03585at 766.481 kb on - strand, within AO353_03585at 766.583 kb on + strandat 766.654 kb on + strandat 766.654 kb on + strandat 766.654 kb on + strandat 766.655 kb on - strandat 766.831 kb on + strand, within AO353_03590at 766.882 kb on - strand, within AO353_03590at 766.882 kb on - strand, within AO353_03590at 767.080 kb on + strand, within AO353_03590at 767.103 kb on + strand, within AO353_03590at 767.103 kb on + strand, within AO353_03590at 767.104 kb on - strand, within AO353_03590at 767.129 kb on + strand, within AO353_03590at 767.129 kb on + strand, within AO353_03590at 767.129 kb on + strand, within AO353_03590at 767.129 kb on + strand, within AO353_03590at 767.177 kb on + strandat 767.178 kb on - strandat 767.186 kb on - strandat 767.201 kb on - strandat 767.296 kb on + strandat 767.297 kb on - strandat 767.435 kb on + strandat 767.435 kb on + strandat 767.584 kb on - strand, within AO353_03595at 767.595 kb on - strand, within AO353_03595at 767.742 kb on - strand, within AO353_03595at 767.742 kb on - strand, within AO353_03595at 767.742 kb on - strand, within AO353_03595at 767.876 kb on + strand, within AO353_03595at 767.876 kb on + strand, within AO353_03595at 767.876 kb on + strand, within AO353_03595at 767.877 kb on - strand, within AO353_03595at 767.877 kb on - strand, within AO353_03595at 767.877 kb on - strand, within AO353_03595at 768.135 kb on + strandat 768.135 kb on + strandat 768.135 kb on + strandat 768.135 kb on + strandat 768.156 kb on + strandat 768.157 kb on - strandat 768.170 kb on - strandat 768.171 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Fusidic 0.125 mg/ml
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765,836 + -0.5
765,837 - -0.5
765,935 + -0.9
765,936 - -0.5
765,936 - -1.1
766,480 + AO353_03585 0.90 -0.1
766,480 + AO353_03585 0.90 -1.5
766,480 + AO353_03585 0.90 -0.3
766,480 + AO353_03585 0.90 -0.7
766,481 - AO353_03585 0.90 -0.5
766,481 - AO353_03585 0.90 -1.9
766,481 - AO353_03585 0.90 -1.8
766,583 + +0.3
766,654 + -0.5
766,654 + -2.1
766,654 + -0.1
766,655 - -1.1
766,831 + AO353_03590 0.32 -0.5
766,882 - AO353_03590 0.42 -0.9
766,882 - AO353_03590 0.42 -1.7
767,080 + AO353_03590 0.80 -2.5
767,103 + AO353_03590 0.84 -1.3
767,103 + AO353_03590 0.84 -0.9
767,104 - AO353_03590 0.84 -1.7
767,129 + AO353_03590 0.89 -0.9
767,129 + AO353_03590 0.89 -0.7
767,129 + AO353_03590 0.89 -2.6
767,129 + AO353_03590 0.89 -1.1
767,177 + -1.5
767,178 - -1.7
767,186 - +0.5
767,201 - -0.7
767,296 + +1.3
767,297 - +0.3
767,435 + +0.1
767,435 + +0.1
767,584 - AO353_03595 0.26 -0.8
767,595 - AO353_03595 0.28 -2.1
767,742 - AO353_03595 0.47 -0.8
767,742 - AO353_03595 0.47 +0.3
767,742 - AO353_03595 0.47 +0.9
767,876 + AO353_03595 0.65 +0.1
767,876 + AO353_03595 0.65 -0.7
767,876 + AO353_03595 0.65 +1.1
767,877 - AO353_03595 0.65 -0.7
767,877 - AO353_03595 0.65 -2.4
767,877 - AO353_03595 0.65 -0.7
768,135 + -0.0
768,135 + -0.9
768,135 + -1.8
768,135 + -1.6
768,156 + -1.8
768,157 - -0.1
768,170 - -0.2
768,171 + -0.9

Or see this region's nucleotide sequence