Experiment: Fusidic 0.125 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_03455 and AO353_03460 are separated by 36 nucleotides AO353_03460 and AO353_03465 are separated by 496 nucleotides
AO353_03455: AO353_03455 - acyl-CoA transferase, at 737,540 to 738,886
_03455
AO353_03460: AO353_03460 - 3-methyladenine DNA glycosylase 2, at 738,923 to 739,786
_03460
AO353_03465: AO353_03465 - arginine-ornithine antiporter, at 740,283 to 741,710
_03465
Position (kb) 738
739
740 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 738.642 kb on + strand, within AO353_03455 at 738.642 kb on + strand, within AO353_03455 at 738.643 kb on - strand, within AO353_03455 at 738.643 kb on - strand, within AO353_03455 at 738.643 kb on - strand, within AO353_03455 at 738.643 kb on - strand, within AO353_03455 at 738.643 kb on - strand, within AO353_03455 at 738.643 kb on - strand, within AO353_03455 at 738.643 kb on - strand, within AO353_03455 at 738.643 kb on - strand, within AO353_03455 at 738.643 kb on - strand, within AO353_03455 at 738.643 kb on - strand, within AO353_03455 at 738.807 kb on + strand at 738.808 kb on - strand at 738.808 kb on - strand at 738.820 kb on - strand at 738.967 kb on - strand at 738.967 kb on - strand at 739.113 kb on + strand, within AO353_03460 at 739.113 kb on + strand, within AO353_03460 at 739.114 kb on - strand, within AO353_03460 at 739.114 kb on - strand, within AO353_03460 at 739.162 kb on + strand, within AO353_03460 at 739.345 kb on - strand, within AO353_03460 at 739.416 kb on - strand, within AO353_03460 at 739.454 kb on + strand, within AO353_03460 at 739.454 kb on + strand, within AO353_03460 at 739.454 kb on + strand, within AO353_03460 at 739.454 kb on + strand, within AO353_03460 at 739.454 kb on + strand, within AO353_03460 at 739.454 kb on + strand, within AO353_03460 at 739.454 kb on + strand, within AO353_03460 at 739.604 kb on + strand, within AO353_03460 at 739.605 kb on - strand, within AO353_03460 at 739.605 kb on - strand, within AO353_03460 at 739.605 kb on - strand, within AO353_03460 at 739.605 kb on - strand, within AO353_03460 at 739.605 kb on - strand, within AO353_03460 at 739.618 kb on + strand, within AO353_03460 at 739.618 kb on + strand, within AO353_03460 at 739.619 kb on - strand, within AO353_03460 at 739.633 kb on + strand, within AO353_03460 at 739.755 kb on + strand at 739.755 kb on + strand at 739.756 kb on - strand at 739.767 kb on + strand at 739.768 kb on - strand at 739.834 kb on + strand at 739.834 kb on + strand at 739.834 kb on + strand at 739.834 kb on + strand at 739.834 kb on + strand at 739.834 kb on + strand at 739.835 kb on - strand at 739.835 kb on - strand at 739.835 kb on - strand at 739.835 kb on - strand at 739.835 kb on - strand at 739.835 kb on - strand at 739.878 kb on - strand at 739.878 kb on - strand at 739.896 kb on + strand at 739.897 kb on - strand at 739.897 kb on - strand at 739.897 kb on - strand at 739.897 kb on - strand at 739.900 kb on + strand at 739.900 kb on + strand at 739.901 kb on - strand at 739.912 kb on + strand at 739.921 kb on - strand at 739.921 kb on - strand at 739.923 kb on + strand at 739.924 kb on - strand at 739.967 kb on + strand at 739.967 kb on + strand at 739.967 kb on + strand at 739.968 kb on - strand at 740.010 kb on + strand at 740.014 kb on + strand at 740.014 kb on + strand at 740.014 kb on + strand at 740.014 kb on + strand at 740.014 kb on + strand at 740.015 kb on - strand at 740.068 kb on + strand at 740.068 kb on + strand at 740.069 kb on - strand at 740.069 kb on - strand at 740.069 kb on - strand at 740.112 kb on + strand at 740.113 kb on - strand at 740.167 kb on + strand at 740.168 kb on - strand at 740.168 kb on - strand at 740.244 kb on + strand at 740.306 kb on - strand at 740.306 kb on - strand at 740.306 kb on - strand at 740.321 kb on - strand at 740.332 kb on + strand at 740.332 kb on + strand at 740.333 kb on - strand at 740.333 kb on - strand at 740.333 kb on - strand at 740.335 kb on + strand at 740.335 kb on + strand at 740.335 kb on + strand at 740.335 kb on + strand at 740.335 kb on + strand at 740.335 kb on + strand at 740.335 kb on + strand at 740.335 kb on + strand at 740.335 kb on + strand at 740.335 kb on + strand at 740.335 kb on + strand at 740.335 kb on + strand at 740.335 kb on + strand at 740.335 kb on + strand at 740.336 kb on - strand at 740.336 kb on - strand at 740.336 kb on - strand at 740.336 kb on - strand at 740.336 kb on - strand at 740.336 kb on - strand at 740.336 kb on - strand at 740.336 kb on - strand at 740.336 kb on - strand at 740.336 kb on - strand at 740.505 kb on + strand, within AO353_03465 at 740.505 kb on + strand, within AO353_03465 at 740.505 kb on + strand, within AO353_03465 at 740.506 kb on - strand, within AO353_03465 at 740.506 kb on - strand, within AO353_03465 at 740.512 kb on - strand, within AO353_03465 at 740.535 kb on + strand, within AO353_03465 at 740.535 kb on + strand, within AO353_03465 at 740.535 kb on + strand, within AO353_03465 at 740.535 kb on + strand, within AO353_03465 at 740.535 kb on + strand, within AO353_03465 at 740.535 kb on + strand, within AO353_03465 at 740.535 kb on + strand, within AO353_03465 at 740.535 kb on + strand, within AO353_03465 at 740.535 kb on + strand, within AO353_03465 at 740.535 kb on + strand, within AO353_03465 at 740.536 kb on - strand, within AO353_03465 at 740.536 kb on - strand, within AO353_03465 at 740.536 kb on - strand, within AO353_03465 at 740.536 kb on - strand, within AO353_03465 at 740.536 kb on - strand, within AO353_03465 at 740.595 kb on + strand, within AO353_03465 at 740.596 kb on - strand, within AO353_03465 at 740.603 kb on - strand, within AO353_03465 at 740.603 kb on - strand, within AO353_03465 at 740.603 kb on - strand, within AO353_03465 at 740.625 kb on + strand, within AO353_03465 at 740.625 kb on + strand, within AO353_03465 at 740.655 kb on - strand, within AO353_03465 at 740.655 kb on - strand, within AO353_03465
Per-strain Table
Position Strand Gene LocusTag Fraction Fusidic 0.125 mg/ml remove 738,642 + AO353_03455 0.82 +0.4 738,642 + AO353_03455 0.82 +1.0 738,643 - AO353_03455 0.82 +0.6 738,643 - AO353_03455 0.82 +0.1 738,643 - AO353_03455 0.82 -0.1 738,643 - AO353_03455 0.82 -0.9 738,643 - AO353_03455 0.82 +1.0 738,643 - AO353_03455 0.82 -0.7 738,643 - AO353_03455 0.82 -1.5 738,643 - AO353_03455 0.82 +0.7 738,643 - AO353_03455 0.82 -1.6 738,643 - AO353_03455 0.82 -0.8 738,807 + +1.0 738,808 - +1.6 738,808 - +0.6 738,820 - -0.3 738,967 - -1.5 738,967 - -1.2 739,113 + AO353_03460 0.22 +0.1 739,113 + AO353_03460 0.22 +0.2 739,114 - AO353_03460 0.22 -1.2 739,114 - AO353_03460 0.22 +0.8 739,162 + AO353_03460 0.28 +0.8 739,345 - AO353_03460 0.49 -0.5 739,416 - AO353_03460 0.57 -0.2 739,454 + AO353_03460 0.61 -0.2 739,454 + AO353_03460 0.61 -1.2 739,454 + AO353_03460 0.61 -0.1 739,454 + AO353_03460 0.61 -2.2 739,454 + AO353_03460 0.61 -0.8 739,454 + AO353_03460 0.61 -0.7 739,454 + AO353_03460 0.61 -0.2 739,604 + AO353_03460 0.79 +0.7 739,605 - AO353_03460 0.79 -1.9 739,605 - AO353_03460 0.79 +0.7 739,605 - AO353_03460 0.79 -0.8 739,605 - AO353_03460 0.79 -0.5 739,605 - AO353_03460 0.79 -1.3 739,618 + AO353_03460 0.80 -1.6 739,618 + AO353_03460 0.80 -1.5 739,619 - AO353_03460 0.81 +0.2 739,633 + AO353_03460 0.82 -1.9 739,755 + +0.1 739,755 + +0.7 739,756 - +0.8 739,767 + +0.7 739,768 - +0.8 739,834 + +1.2 739,834 + +1.5 739,834 + -0.2 739,834 + -0.4 739,834 + +0.1 739,834 + +0.5 739,835 - +0.2 739,835 - -1.7 739,835 - -1.0 739,835 - -0.0 739,835 - +2.7 739,835 - +0.0 739,878 - +0.7 739,878 - -1.2 739,896 + +1.7 739,897 - +1.3 739,897 - -1.1 739,897 - -1.5 739,897 - -0.6 739,900 + +0.4 739,900 + -1.0 739,901 - +0.3 739,912 + -0.9 739,921 - +0.4 739,921 - -0.8 739,923 + -0.5 739,924 - +0.2 739,967 + +0.4 739,967 + +0.1 739,967 + +0.2 739,968 - +0.5 740,010 + +0.5 740,014 + -1.0 740,014 + -0.2 740,014 + -0.1 740,014 + +0.8 740,014 + -0.2 740,015 - +1.7 740,068 + +0.2 740,068 + -0.2 740,069 - +2.3 740,069 - +1.0 740,069 - -1.2 740,112 + +1.0 740,113 - -0.2 740,167 + +1.4 740,168 - +0.4 740,168 - +0.2 740,244 + +1.6 740,306 - +0.6 740,306 - +0.2 740,306 - +0.8 740,321 - +0.4 740,332 + -0.8 740,332 + -0.6 740,333 - +0.7 740,333 - -1.0 740,333 - -0.0 740,335 + -0.2 740,335 + +1.5 740,335 + +0.5 740,335 + -0.8 740,335 + -0.6 740,335 + +1.6 740,335 + +0.2 740,335 + -0.3 740,335 + -0.8 740,335 + -1.3 740,335 + -0.4 740,335 + -0.3 740,335 + +0.4 740,335 + +0.8 740,336 - -1.0 740,336 - +1.7 740,336 - +0.5 740,336 - +0.7 740,336 - +0.5 740,336 - +0.7 740,336 - -0.2 740,336 - -0.8 740,336 - +2.1 740,336 - -0.5 740,505 + AO353_03465 0.16 -0.1 740,505 + AO353_03465 0.16 -0.8 740,505 + AO353_03465 0.16 +1.0 740,506 - AO353_03465 0.16 -1.2 740,506 - AO353_03465 0.16 -1.2 740,512 - AO353_03465 0.16 -0.8 740,535 + AO353_03465 0.18 -0.2 740,535 + AO353_03465 0.18 +0.5 740,535 + AO353_03465 0.18 -2.1 740,535 + AO353_03465 0.18 -0.2 740,535 + AO353_03465 0.18 -0.2 740,535 + AO353_03465 0.18 -0.2 740,535 + AO353_03465 0.18 -0.9 740,535 + AO353_03465 0.18 -0.3 740,535 + AO353_03465 0.18 +0.5 740,535 + AO353_03465 0.18 +0.4 740,536 - AO353_03465 0.18 -1.3 740,536 - AO353_03465 0.18 -1.2 740,536 - AO353_03465 0.18 +0.8 740,536 - AO353_03465 0.18 -0.9 740,536 - AO353_03465 0.18 +0.2 740,595 + AO353_03465 0.22 -2.9 740,596 - AO353_03465 0.22 -1.0 740,603 - AO353_03465 0.22 -0.2 740,603 - AO353_03465 0.22 -0.8 740,603 - AO353_03465 0.22 +0.7 740,625 + AO353_03465 0.24 -2.0 740,625 + AO353_03465 0.24 -0.5 740,655 - AO353_03465 0.26 -0.9 740,655 - AO353_03465 0.26 +0.3
Or see this region's nucleotide sequence