Experiment: Fusidic 0.125 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_00525 and AO353_00530 are separated by 213 nucleotides AO353_00530 and AO353_00535 are separated by 118 nucleotides
AO353_00525: AO353_00525 - ABC transporter ATP-binding protein, at 106,950 to 108,866
_00525
AO353_00530: AO353_00530 - lytic transglycosylase, at 109,080 to 111,008
_00530
AO353_00535: AO353_00535 - ABC transporter ATP-binding protein, at 111,127 to 112,917
_00535
Position (kb)
109
110
111
112 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 108.249 kb on - strand, within AO353_00525 at 108.565 kb on + strand, within AO353_00525 at 108.565 kb on + strand, within AO353_00525 at 108.566 kb on - strand, within AO353_00525 at 108.566 kb on - strand, within AO353_00525 at 108.654 kb on + strand, within AO353_00525 at 108.822 kb on - strand at 108.822 kb on - strand at 108.896 kb on + strand at 108.897 kb on - strand at 108.897 kb on - strand at 108.970 kb on + strand at 109.014 kb on + strand at 109.015 kb on - strand at 109.019 kb on + strand at 109.019 kb on + strand at 109.020 kb on - strand at 109.020 kb on - strand at 109.021 kb on + strand at 109.021 kb on + strand at 109.022 kb on - strand at 109.022 kb on - strand at 109.022 kb on - strand at 109.022 kb on - strand at 109.026 kb on - strand at 109.176 kb on + strand at 109.176 kb on + strand at 109.177 kb on - strand at 109.179 kb on + strand at 109.179 kb on + strand at 109.179 kb on + strand at 109.180 kb on - strand at 109.180 kb on - strand at 109.225 kb on - strand at 109.270 kb on - strand at 109.431 kb on + strand, within AO353_00530 at 109.431 kb on + strand, within AO353_00530 at 109.431 kb on + strand, within AO353_00530 at 109.431 kb on + strand, within AO353_00530 at 109.432 kb on - strand, within AO353_00530 at 109.432 kb on - strand, within AO353_00530 at 109.432 kb on - strand, within AO353_00530 at 109.432 kb on - strand, within AO353_00530 at 109.434 kb on + strand, within AO353_00530 at 109.434 kb on + strand, within AO353_00530 at 109.482 kb on + strand, within AO353_00530 at 109.482 kb on + strand, within AO353_00530 at 109.483 kb on - strand, within AO353_00530 at 109.483 kb on - strand, within AO353_00530 at 109.516 kb on - strand, within AO353_00530 at 109.659 kb on + strand, within AO353_00530 at 109.659 kb on + strand, within AO353_00530 at 109.659 kb on + strand, within AO353_00530 at 109.659 kb on + strand, within AO353_00530 at 109.659 kb on + strand, within AO353_00530 at 109.659 kb on + strand, within AO353_00530 at 109.659 kb on + strand, within AO353_00530 at 109.659 kb on + strand, within AO353_00530 at 109.659 kb on + strand, within AO353_00530 at 109.660 kb on - strand, within AO353_00530 at 109.660 kb on - strand, within AO353_00530 at 109.660 kb on - strand, within AO353_00530 at 109.660 kb on - strand, within AO353_00530 at 109.660 kb on - strand, within AO353_00530 at 109.660 kb on - strand, within AO353_00530 at 109.660 kb on - strand, within AO353_00530 at 109.717 kb on + strand, within AO353_00530 at 109.866 kb on + strand, within AO353_00530 at 109.866 kb on + strand, within AO353_00530 at 109.866 kb on + strand, within AO353_00530 at 109.866 kb on + strand, within AO353_00530 at 109.866 kb on + strand, within AO353_00530 at 109.866 kb on + strand, within AO353_00530 at 109.866 kb on + strand, within AO353_00530 at 109.866 kb on + strand, within AO353_00530 at 109.866 kb on + strand, within AO353_00530 at 109.867 kb on - strand, within AO353_00530 at 109.867 kb on - strand, within AO353_00530 at 109.867 kb on - strand, within AO353_00530 at 109.867 kb on - strand, within AO353_00530 at 109.867 kb on - strand, within AO353_00530 at 109.867 kb on - strand, within AO353_00530 at 109.867 kb on - strand, within AO353_00530 at 109.867 kb on - strand, within AO353_00530 at 109.867 kb on - strand, within AO353_00530 at 109.867 kb on - strand, within AO353_00530 at 109.867 kb on - strand, within AO353_00530 at 109.867 kb on - strand, within AO353_00530 at 109.977 kb on + strand, within AO353_00530 at 109.978 kb on - strand, within AO353_00530 at 109.978 kb on - strand, within AO353_00530 at 109.978 kb on - strand, within AO353_00530 at 109.978 kb on - strand, within AO353_00530 at 109.978 kb on - strand, within AO353_00530 at 110.058 kb on + strand, within AO353_00530 at 110.096 kb on + strand, within AO353_00530 at 110.173 kb on - strand, within AO353_00530 at 110.173 kb on - strand, within AO353_00530 at 110.173 kb on - strand, within AO353_00530 at 110.173 kb on - strand, within AO353_00530 at 110.173 kb on - strand, within AO353_00530 at 110.173 kb on - strand, within AO353_00530 at 110.173 kb on - strand, within AO353_00530 at 110.173 kb on - strand, within AO353_00530 at 110.173 kb on - strand, within AO353_00530 at 110.202 kb on + strand, within AO353_00530 at 110.202 kb on + strand, within AO353_00530 at 110.203 kb on - strand, within AO353_00530 at 110.286 kb on - strand, within AO353_00530 at 110.297 kb on + strand, within AO353_00530 at 110.298 kb on - strand, within AO353_00530 at 110.298 kb on - strand, within AO353_00530 at 110.298 kb on - strand, within AO353_00530 at 110.307 kb on - strand, within AO353_00530 at 110.308 kb on + strand, within AO353_00530 at 110.308 kb on + strand, within AO353_00530 at 110.308 kb on + strand, within AO353_00530 at 110.308 kb on + strand, within AO353_00530 at 110.308 kb on + strand, within AO353_00530 at 110.308 kb on + strand, within AO353_00530 at 110.308 kb on + strand, within AO353_00530 at 110.309 kb on - strand, within AO353_00530 at 110.309 kb on - strand, within AO353_00530 at 110.309 kb on - strand, within AO353_00530 at 110.309 kb on - strand, within AO353_00530 at 110.309 kb on - strand, within AO353_00530 at 110.309 kb on - strand, within AO353_00530 at 110.309 kb on - strand, within AO353_00530 at 110.368 kb on - strand, within AO353_00530 at 110.368 kb on - strand, within AO353_00530 at 110.388 kb on - strand, within AO353_00530 at 110.388 kb on - strand, within AO353_00530 at 110.425 kb on - strand, within AO353_00530 at 110.425 kb on - strand, within AO353_00530 at 110.439 kb on + strand, within AO353_00530 at 110.439 kb on + strand, within AO353_00530 at 110.439 kb on + strand, within AO353_00530 at 110.440 kb on - strand, within AO353_00530 at 110.440 kb on - strand, within AO353_00530 at 110.475 kb on + strand, within AO353_00530 at 110.476 kb on - strand, within AO353_00530 at 110.527 kb on + strand, within AO353_00530 at 110.527 kb on + strand, within AO353_00530 at 110.528 kb on - strand, within AO353_00530 at 110.528 kb on - strand, within AO353_00530 at 110.528 kb on - strand, within AO353_00530 at 110.528 kb on - strand, within AO353_00530 at 110.749 kb on - strand, within AO353_00530 at 110.805 kb on + strand, within AO353_00530 at 110.805 kb on + strand, within AO353_00530 at 110.806 kb on - strand, within AO353_00530 at 110.907 kb on + strand at 110.911 kb on + strand at 110.911 kb on + strand at 110.911 kb on + strand at 110.928 kb on + strand at 110.929 kb on - strand at 110.929 kb on - strand at 110.941 kb on - strand at 110.992 kb on - strand at 110.992 kb on - strand at 111.007 kb on - strand at 111.007 kb on - strand at 111.007 kb on - strand at 111.007 kb on - strand at 111.055 kb on + strand at 111.056 kb on - strand at 111.116 kb on + strand at 111.116 kb on + strand at 111.116 kb on + strand at 111.116 kb on + strand at 111.116 kb on + strand at 111.116 kb on + strand at 111.116 kb on + strand at 111.117 kb on - strand at 111.117 kb on - strand at 111.117 kb on - strand at 111.128 kb on + strand at 111.172 kb on + strand at 111.200 kb on + strand at 111.201 kb on - strand at 111.201 kb on - strand at 111.235 kb on - strand at 111.235 kb on - strand at 111.244 kb on + strand at 111.675 kb on + strand, within AO353_00535 at 111.734 kb on + strand, within AO353_00535 at 111.734 kb on + strand, within AO353_00535 at 111.734 kb on + strand, within AO353_00535 at 111.735 kb on - strand, within AO353_00535 at 111.735 kb on - strand, within AO353_00535 at 111.755 kb on + strand, within AO353_00535 at 111.756 kb on - strand, within AO353_00535 at 111.756 kb on - strand, within AO353_00535 at 111.842 kb on + strand, within AO353_00535 at 111.842 kb on + strand, within AO353_00535 at 111.842 kb on + strand, within AO353_00535 at 111.842 kb on + strand, within AO353_00535 at 111.842 kb on + strand, within AO353_00535 at 111.843 kb on - strand, within AO353_00535 at 111.843 kb on - strand, within AO353_00535 at 111.843 kb on - strand, within AO353_00535 at 111.864 kb on - strand, within AO353_00535 at 111.874 kb on + strand, within AO353_00535 at 111.875 kb on - strand, within AO353_00535
Per-strain Table
Position Strand Gene LocusTag Fraction Fusidic 0.125 mg/ml remove 108,249 - AO353_00525 0.68 +1.2 108,565 + AO353_00525 0.84 +0.6 108,565 + AO353_00525 0.84 +0.3 108,566 - AO353_00525 0.84 -0.7 108,566 - AO353_00525 0.84 +1.7 108,654 + AO353_00525 0.89 +0.1 108,822 - +1.4 108,822 - +2.6 108,896 + -1.4 108,897 - +1.2 108,897 - +1.7 108,970 + -0.6 109,014 + +0.7 109,015 - +1.2 109,019 + -2.6 109,019 + -2.3 109,020 - +1.8 109,020 - +1.5 109,021 + +2.1 109,021 + +0.4 109,022 - +0.7 109,022 - +2.9 109,022 - +0.3 109,022 - -0.2 109,026 - +1.8 109,176 + +2.2 109,176 + -1.1 109,177 - +1.0 109,179 + +2.3 109,179 + -0.0 109,179 + -0.4 109,180 - +1.1 109,180 - +1.2 109,225 - +0.9 109,270 - +1.6 109,431 + AO353_00530 0.18 +1.3 109,431 + AO353_00530 0.18 +1.2 109,431 + AO353_00530 0.18 +1.6 109,431 + AO353_00530 0.18 +1.9 109,432 - AO353_00530 0.18 -1.4 109,432 - AO353_00530 0.18 +0.7 109,432 - AO353_00530 0.18 +1.9 109,432 - AO353_00530 0.18 +1.4 109,434 + AO353_00530 0.18 +1.5 109,434 + AO353_00530 0.18 +0.7 109,482 + AO353_00530 0.21 +1.8 109,482 + AO353_00530 0.21 +1.2 109,483 - AO353_00530 0.21 +2.0 109,483 - AO353_00530 0.21 +0.7 109,516 - AO353_00530 0.23 +1.3 109,659 + AO353_00530 0.30 +0.9 109,659 + AO353_00530 0.30 +0.8 109,659 + AO353_00530 0.30 +1.0 109,659 + AO353_00530 0.30 +2.7 109,659 + AO353_00530 0.30 +0.6 109,659 + AO353_00530 0.30 +0.5 109,659 + AO353_00530 0.30 -0.1 109,659 + AO353_00530 0.30 +0.5 109,659 + AO353_00530 0.30 -0.9 109,660 - AO353_00530 0.30 -0.3 109,660 - AO353_00530 0.30 +2.6 109,660 - AO353_00530 0.30 +1.9 109,660 - AO353_00530 0.30 +0.3 109,660 - AO353_00530 0.30 +1.7 109,660 - AO353_00530 0.30 +1.2 109,660 - AO353_00530 0.30 +0.9 109,717 + AO353_00530 0.33 +1.1 109,866 + AO353_00530 0.41 +0.6 109,866 + AO353_00530 0.41 +0.5 109,866 + AO353_00530 0.41 -1.6 109,866 + AO353_00530 0.41 +2.5 109,866 + AO353_00530 0.41 +1.3 109,866 + AO353_00530 0.41 +2.1 109,866 + AO353_00530 0.41 -0.8 109,866 + AO353_00530 0.41 +2.8 109,866 + AO353_00530 0.41 +1.5 109,867 - AO353_00530 0.41 +1.7 109,867 - AO353_00530 0.41 +2.0 109,867 - AO353_00530 0.41 +1.2 109,867 - AO353_00530 0.41 -0.9 109,867 - AO353_00530 0.41 +1.4 109,867 - AO353_00530 0.41 +0.9 109,867 - AO353_00530 0.41 +1.6 109,867 - AO353_00530 0.41 +0.7 109,867 - AO353_00530 0.41 +0.1 109,867 - AO353_00530 0.41 +2.3 109,867 - AO353_00530 0.41 +0.1 109,867 - AO353_00530 0.41 +0.9 109,977 + AO353_00530 0.47 +1.4 109,978 - AO353_00530 0.47 +0.9 109,978 - AO353_00530 0.47 +1.2 109,978 - AO353_00530 0.47 +2.5 109,978 - AO353_00530 0.47 +1.2 109,978 - AO353_00530 0.47 +2.0 110,058 + AO353_00530 0.51 +2.7 110,096 + AO353_00530 0.53 +1.0 110,173 - AO353_00530 0.57 +0.9 110,173 - AO353_00530 0.57 +0.9 110,173 - AO353_00530 0.57 +1.3 110,173 - AO353_00530 0.57 +0.3 110,173 - AO353_00530 0.57 +1.7 110,173 - AO353_00530 0.57 +1.8 110,173 - AO353_00530 0.57 +1.6 110,173 - AO353_00530 0.57 +1.1 110,173 - AO353_00530 0.57 -1.6 110,202 + AO353_00530 0.58 +1.6 110,202 + AO353_00530 0.58 +1.3 110,203 - AO353_00530 0.58 +1.7 110,286 - AO353_00530 0.63 +1.6 110,297 + AO353_00530 0.63 +1.0 110,298 - AO353_00530 0.63 +3.3 110,298 - AO353_00530 0.63 +3.2 110,298 - AO353_00530 0.63 +1.5 110,307 - AO353_00530 0.64 +1.1 110,308 + AO353_00530 0.64 +0.4 110,308 + AO353_00530 0.64 +1.4 110,308 + AO353_00530 0.64 +2.5 110,308 + AO353_00530 0.64 +1.1 110,308 + AO353_00530 0.64 +2.6 110,308 + AO353_00530 0.64 +1.6 110,308 + AO353_00530 0.64 +1.4 110,309 - AO353_00530 0.64 +2.9 110,309 - AO353_00530 0.64 +1.0 110,309 - AO353_00530 0.64 +1.3 110,309 - AO353_00530 0.64 +1.3 110,309 - AO353_00530 0.64 +0.9 110,309 - AO353_00530 0.64 +1.6 110,309 - AO353_00530 0.64 +1.7 110,368 - AO353_00530 0.67 -0.6 110,368 - AO353_00530 0.67 +0.1 110,388 - AO353_00530 0.68 +0.7 110,388 - AO353_00530 0.68 +1.9 110,425 - AO353_00530 0.70 +1.5 110,425 - AO353_00530 0.70 +0.7 110,439 + AO353_00530 0.70 +1.5 110,439 + AO353_00530 0.70 +1.7 110,439 + AO353_00530 0.70 +0.9 110,440 - AO353_00530 0.71 +1.9 110,440 - AO353_00530 0.71 -1.7 110,475 + AO353_00530 0.72 +0.8 110,476 - AO353_00530 0.72 +1.8 110,527 + AO353_00530 0.75 -0.4 110,527 + AO353_00530 0.75 +1.5 110,528 - AO353_00530 0.75 -0.3 110,528 - AO353_00530 0.75 +2.5 110,528 - AO353_00530 0.75 +1.4 110,528 - AO353_00530 0.75 +1.0 110,749 - AO353_00530 0.87 +1.2 110,805 + AO353_00530 0.89 +2.6 110,805 + AO353_00530 0.89 +0.6 110,806 - AO353_00530 0.89 +3.2 110,907 + +2.0 110,911 + +1.0 110,911 + -0.6 110,911 + +3.0 110,928 + +1.1 110,929 - -1.1 110,929 - +2.2 110,941 - -0.1 110,992 - +1.3 110,992 - +0.2 111,007 - +0.7 111,007 - +0.5 111,007 - +0.4 111,007 - +0.7 111,055 + +1.0 111,056 - +0.3 111,116 + +0.6 111,116 + -0.4 111,116 + +0.4 111,116 + -0.2 111,116 + +0.7 111,116 + +1.1 111,116 + +0.5 111,117 - -0.9 111,117 - -1.0 111,117 - -1.2 111,128 + -0.7 111,172 + -0.1 111,200 + +0.1 111,201 - -0.1 111,201 - +0.2 111,235 - +1.0 111,235 - -0.6 111,244 + -1.1 111,675 + AO353_00535 0.31 +1.4 111,734 + AO353_00535 0.34 +1.5 111,734 + AO353_00535 0.34 +0.2 111,734 + AO353_00535 0.34 -1.0 111,735 - AO353_00535 0.34 +1.2 111,735 - AO353_00535 0.34 +0.6 111,755 + AO353_00535 0.35 -0.1 111,756 - AO353_00535 0.35 -0.0 111,756 - AO353_00535 0.35 +2.0 111,842 + AO353_00535 0.40 -0.6 111,842 + AO353_00535 0.40 -0.6 111,842 + AO353_00535 0.40 +0.5 111,842 + AO353_00535 0.40 -0.0 111,842 + AO353_00535 0.40 +1.6 111,843 - AO353_00535 0.40 +0.7 111,843 - AO353_00535 0.40 +1.4 111,843 - AO353_00535 0.40 +1.1 111,864 - AO353_00535 0.41 +0.6 111,874 + AO353_00535 0.42 -1.9 111,875 - AO353_00535 0.42 -1.4
Or see this region's nucleotide sequence