Experiment: Fusidic 0.125 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_00105 and AO353_00110 are separated by 28 nucleotides AO353_00110 and AO353_00115 overlap by 28 nucleotides AO353_00115 and AO353_00120 overlap by 4 nucleotides AO353_00120 and AO353_00125 overlap by 4 nucleotides
AO353_00105: AO353_00105 - hypothetical protein, at 23,324 to 24,007
_00105
AO353_00110: AO353_00110 - hypothetical protein, at 24,036 to 25,019
_00110
AO353_00115: AO353_00115 - hypothetical protein, at 24,992 to 25,696
_00115
AO353_00120: AO353_00120 - DNA-binding protein, at 25,693 to 26,238
_00120
AO353_00125: AO353_00125 - hypothetical protein, at 26,235 to 27,158
_00125
Position (kb)
24
25
26 Strain fitness (log2 ratio)
-2
-1
0
1 at 24.048 kb on + strand at 24.048 kb on + strand at 24.048 kb on + strand at 24.059 kb on + strand at 24.081 kb on + strand at 24.081 kb on + strand at 24.081 kb on + strand at 24.159 kb on + strand, within AO353_00110 at 24.159 kb on + strand, within AO353_00110 at 24.159 kb on + strand, within AO353_00110 at 24.210 kb on + strand, within AO353_00110 at 24.213 kb on + strand, within AO353_00110 at 24.213 kb on + strand, within AO353_00110 at 24.213 kb on + strand, within AO353_00110 at 24.214 kb on - strand, within AO353_00110 at 24.214 kb on - strand, within AO353_00110 at 24.222 kb on - strand, within AO353_00110 at 24.256 kb on - strand, within AO353_00110 at 24.321 kb on + strand, within AO353_00110 at 24.321 kb on + strand, within AO353_00110 at 24.321 kb on + strand, within AO353_00110 at 24.321 kb on + strand, within AO353_00110 at 24.321 kb on + strand, within AO353_00110 at 24.321 kb on + strand, within AO353_00110 at 24.322 kb on - strand, within AO353_00110 at 24.322 kb on - strand, within AO353_00110 at 24.322 kb on - strand, within AO353_00110 at 24.322 kb on - strand, within AO353_00110 at 24.322 kb on - strand, within AO353_00110 at 24.322 kb on - strand, within AO353_00110 at 24.322 kb on - strand, within AO353_00110 at 24.322 kb on - strand, within AO353_00110 at 24.334 kb on + strand, within AO353_00110 at 24.334 kb on + strand, within AO353_00110 at 24.334 kb on + strand, within AO353_00110 at 24.334 kb on + strand, within AO353_00110 at 24.334 kb on + strand, within AO353_00110 at 24.334 kb on + strand, within AO353_00110 at 24.334 kb on + strand, within AO353_00110 at 24.335 kb on - strand, within AO353_00110 at 24.335 kb on - strand at 24.335 kb on - strand, within AO353_00110 at 24.335 kb on - strand, within AO353_00110 at 24.335 kb on - strand, within AO353_00110 at 24.335 kb on - strand, within AO353_00110 at 24.335 kb on - strand, within AO353_00110 at 24.338 kb on + strand, within AO353_00110 at 24.338 kb on + strand, within AO353_00110 at 24.339 kb on - strand, within AO353_00110 at 24.339 kb on - strand, within AO353_00110 at 24.339 kb on - strand, within AO353_00110 at 24.339 kb on - strand, within AO353_00110 at 24.339 kb on - strand, within AO353_00110 at 24.339 kb on - strand, within AO353_00110 at 24.356 kb on + strand, within AO353_00110 at 24.381 kb on + strand, within AO353_00110 at 24.382 kb on - strand, within AO353_00110 at 24.382 kb on - strand, within AO353_00110 at 24.699 kb on - strand, within AO353_00110 at 24.700 kb on + strand, within AO353_00110 at 24.700 kb on + strand, within AO353_00110 at 24.700 kb on + strand, within AO353_00110 at 24.700 kb on + strand, within AO353_00110 at 24.700 kb on + strand, within AO353_00110 at 24.700 kb on + strand, within AO353_00110 at 24.700 kb on + strand, within AO353_00110 at 24.700 kb on + strand, within AO353_00110 at 24.701 kb on - strand, within AO353_00110 at 24.701 kb on - strand, within AO353_00110 at 24.701 kb on - strand, within AO353_00110 at 24.701 kb on - strand, within AO353_00110 at 24.701 kb on - strand, within AO353_00110 at 24.701 kb on - strand, within AO353_00110 at 24.701 kb on - strand, within AO353_00110 at 24.721 kb on + strand, within AO353_00110 at 24.746 kb on + strand, within AO353_00110 at 24.747 kb on - strand, within AO353_00110 at 24.766 kb on + strand, within AO353_00110 at 24.766 kb on + strand, within AO353_00110 at 24.766 kb on + strand, within AO353_00110 at 24.766 kb on + strand, within AO353_00110 at 24.766 kb on + strand, within AO353_00110 at 24.766 kb on + strand, within AO353_00110 at 24.766 kb on + strand, within AO353_00110 at 24.766 kb on + strand, within AO353_00110 at 24.766 kb on + strand, within AO353_00110 at 24.766 kb on + strand, within AO353_00110 at 24.766 kb on + strand, within AO353_00110 at 24.766 kb on + strand, within AO353_00110 at 24.767 kb on - strand, within AO353_00110 at 24.767 kb on - strand, within AO353_00110 at 24.767 kb on - strand, within AO353_00110 at 24.767 kb on - strand, within AO353_00110 at 24.767 kb on - strand, within AO353_00110 at 24.767 kb on - strand, within AO353_00110 at 24.767 kb on - strand, within AO353_00110 at 24.767 kb on - strand, within AO353_00110 at 24.767 kb on - strand, within AO353_00110 at 24.767 kb on - strand, within AO353_00110 at 24.767 kb on - strand, within AO353_00110 at 24.767 kb on - strand, within AO353_00110 at 24.767 kb on - strand, within AO353_00110 at 24.825 kb on + strand, within AO353_00110 at 24.878 kb on - strand, within AO353_00110 at 24.993 kb on + strand at 24.994 kb on - strand at 25.308 kb on + strand, within AO353_00115 at 25.335 kb on + strand, within AO353_00115 at 25.335 kb on + strand, within AO353_00115 at 25.336 kb on - strand, within AO353_00115 at 25.509 kb on + strand, within AO353_00115 at 25.546 kb on - strand, within AO353_00115 at 26.000 kb on + strand at 26.000 kb on + strand, within AO353_00120 at 26.000 kb on + strand, within AO353_00120 at 26.001 kb on - strand, within AO353_00120 at 26.001 kb on - strand, within AO353_00120 at 26.067 kb on + strand, within AO353_00120 at 26.067 kb on + strand, within AO353_00120 at 26.068 kb on - strand, within AO353_00120 at 26.227 kb on + strand at 26.228 kb on - strand at 26.228 kb on - strand at 26.239 kb on - strand at 26.524 kb on + strand, within AO353_00125
Per-strain Table
Position Strand Gene LocusTag Fraction Fusidic 0.125 mg/ml remove 24,048 + +0.1 24,048 + +0.3 24,048 + -1.4 24,059 + -1.1 24,081 + +0.1 24,081 + +1.7 24,081 + +0.6 24,159 + AO353_00110 0.12 +0.7 24,159 + AO353_00110 0.12 +1.5 24,159 + AO353_00110 0.12 -1.1 24,210 + AO353_00110 0.18 -0.1 24,213 + AO353_00110 0.18 -2.3 24,213 + AO353_00110 0.18 +0.1 24,213 + AO353_00110 0.18 -0.2 24,214 - AO353_00110 0.18 +0.7 24,214 - AO353_00110 0.18 -1.0 24,222 - AO353_00110 0.19 +0.9 24,256 - AO353_00110 0.22 -0.4 24,321 + AO353_00110 0.29 +0.1 24,321 + AO353_00110 0.29 +0.4 24,321 + AO353_00110 0.29 -2.1 24,321 + AO353_00110 0.29 +0.7 24,321 + AO353_00110 0.29 -0.6 24,321 + AO353_00110 0.29 +0.7 24,322 - AO353_00110 0.29 -0.9 24,322 - AO353_00110 0.29 +1.4 24,322 - AO353_00110 0.29 -0.6 24,322 - AO353_00110 0.29 +0.4 24,322 - AO353_00110 0.29 +0.4 24,322 - AO353_00110 0.29 +0.7 24,322 - AO353_00110 0.29 +0.5 24,322 - AO353_00110 0.29 -0.4 24,334 + AO353_00110 0.30 -0.5 24,334 + AO353_00110 0.30 -1.6 24,334 + AO353_00110 0.30 -1.6 24,334 + AO353_00110 0.30 +0.1 24,334 + AO353_00110 0.30 +0.4 24,334 + AO353_00110 0.30 -0.1 24,334 + AO353_00110 0.30 -2.0 24,335 - AO353_00110 0.30 -1.2 24,335 - +0.7 24,335 - AO353_00110 0.30 -0.2 24,335 - AO353_00110 0.30 +0.1 24,335 - AO353_00110 0.30 -1.7 24,335 - AO353_00110 0.30 +0.7 24,335 - AO353_00110 0.30 -1.4 24,338 + AO353_00110 0.31 -0.2 24,338 + AO353_00110 0.31 -0.3 24,339 - AO353_00110 0.31 +1.7 24,339 - AO353_00110 0.31 -0.1 24,339 - AO353_00110 0.31 +1.7 24,339 - AO353_00110 0.31 -0.6 24,339 - AO353_00110 0.31 -1.9 24,339 - AO353_00110 0.31 +1.7 24,356 + AO353_00110 0.33 -0.1 24,381 + AO353_00110 0.35 -1.1 24,382 - AO353_00110 0.35 +0.6 24,382 - AO353_00110 0.35 -0.6 24,699 - AO353_00110 0.67 +0.7 24,700 + AO353_00110 0.67 +1.0 24,700 + AO353_00110 0.67 -0.5 24,700 + AO353_00110 0.67 -0.4 24,700 + AO353_00110 0.67 +0.7 24,700 + AO353_00110 0.67 -0.7 24,700 + AO353_00110 0.67 -0.4 24,700 + AO353_00110 0.67 +0.3 24,700 + AO353_00110 0.67 -0.9 24,701 - AO353_00110 0.68 -0.3 24,701 - AO353_00110 0.68 +1.2 24,701 - AO353_00110 0.68 +0.0 24,701 - AO353_00110 0.68 +1.1 24,701 - AO353_00110 0.68 -1.6 24,701 - AO353_00110 0.68 +0.5 24,701 - AO353_00110 0.68 -0.6 24,721 + AO353_00110 0.70 -1.9 24,746 + AO353_00110 0.72 +0.1 24,747 - AO353_00110 0.72 +1.7 24,766 + AO353_00110 0.74 -0.1 24,766 + AO353_00110 0.74 -1.7 24,766 + AO353_00110 0.74 -0.1 24,766 + AO353_00110 0.74 -0.5 24,766 + AO353_00110 0.74 +0.4 24,766 + AO353_00110 0.74 +0.5 24,766 + AO353_00110 0.74 +1.2 24,766 + AO353_00110 0.74 +1.4 24,766 + AO353_00110 0.74 -0.4 24,766 + AO353_00110 0.74 +0.1 24,766 + AO353_00110 0.74 +0.1 24,766 + AO353_00110 0.74 -0.5 24,767 - AO353_00110 0.74 -0.1 24,767 - AO353_00110 0.74 +0.8 24,767 - AO353_00110 0.74 +0.9 24,767 - AO353_00110 0.74 +0.2 24,767 - AO353_00110 0.74 -2.4 24,767 - AO353_00110 0.74 +0.6 24,767 - AO353_00110 0.74 -0.7 24,767 - AO353_00110 0.74 -0.3 24,767 - AO353_00110 0.74 -0.3 24,767 - AO353_00110 0.74 -1.3 24,767 - AO353_00110 0.74 -1.4 24,767 - AO353_00110 0.74 -0.3 24,767 - AO353_00110 0.74 +0.4 24,825 + AO353_00110 0.80 +0.2 24,878 - AO353_00110 0.86 -0.2 24,993 + -0.9 24,994 - +0.8 25,308 + AO353_00115 0.45 -0.0 25,335 + AO353_00115 0.49 -2.0 25,335 + AO353_00115 0.49 -0.9 25,336 - AO353_00115 0.49 -1.0 25,509 + AO353_00115 0.73 +0.6 25,546 - AO353_00115 0.79 -1.1 26,000 + -0.6 26,000 + AO353_00120 0.56 +0.3 26,000 + AO353_00120 0.56 +0.9 26,001 - AO353_00120 0.56 +0.3 26,001 - AO353_00120 0.56 +0.8 26,067 + AO353_00120 0.68 +0.3 26,067 + AO353_00120 0.68 +0.3 26,068 - AO353_00120 0.69 +0.6 26,227 + +0.1 26,228 - -0.3 26,228 - -0.3 26,239 - -0.0 26,524 + AO353_00125 0.31 -0.8
Or see this region's nucleotide sequence