Experiment: D-Cycloserine 0.032 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS19580 and ABZR86_RS19585 are separated by 156 nucleotides ABZR86_RS19585 and ABZR86_RS19590 are separated by 84 nucleotides
ABZR86_RS19580: ABZR86_RS19580 - N-acetylmuramoyl-L-alanine amidase, at 399,430 to 400,182
_RS19580
ABZR86_RS19585: ABZR86_RS19585 - GNAT family N-acetyltransferase, at 400,339 to 400,794
_RS19585
ABZR86_RS19590: ABZR86_RS19590 - GGDEF domain-containing protein, at 400,879 to 402,054
_RS19590
Position (kb) 400
401 Strain fitness (log2 ratio) -1
0
1 at 399.418 kb on + strand at 399.418 kb on + strand at 399.419 kb on - strand at 399.431 kb on + strand at 399.431 kb on + strand at 399.470 kb on + strand at 399.470 kb on + strand at 399.471 kb on - strand at 399.471 kb on - strand at 399.929 kb on + strand, within ABZR86_RS19580 at 399.929 kb on + strand, within ABZR86_RS19580 at 399.930 kb on - strand, within ABZR86_RS19580 at 399.930 kb on - strand, within ABZR86_RS19580 at 399.957 kb on - strand, within ABZR86_RS19580 at 399.957 kb on - strand, within ABZR86_RS19580 at 400.621 kb on - strand, within ABZR86_RS19585 at 400.621 kb on - strand, within ABZR86_RS19585 at 400.792 kb on + strand at 400.793 kb on - strand at 401.368 kb on + strand, within ABZR86_RS19590 at 401.369 kb on - strand, within ABZR86_RS19590 at 401.369 kb on - strand, within ABZR86_RS19590 at 401.450 kb on - strand, within ABZR86_RS19590 at 401.450 kb on - strand, within ABZR86_RS19590 at 401.450 kb on - strand, within ABZR86_RS19590 at 401.450 kb on - strand, within ABZR86_RS19590
Per-strain Table
Position Strand Gene LocusTag Fraction D-Cycloserine 0.032 mg/ml remove 399,418 + -0.5 399,418 + +0.3 399,419 - -0.2 399,431 + -0.3 399,431 + -0.1 399,470 + -0.6 399,470 + -0.3 399,471 - -0.5 399,471 - -1.4 399,929 + ABZR86_RS19580 0.66 +0.1 399,929 + ABZR86_RS19580 0.66 -0.6 399,930 - ABZR86_RS19580 0.66 +0.9 399,930 - ABZR86_RS19580 0.66 -0.4 399,957 - ABZR86_RS19580 0.70 -1.4 399,957 - ABZR86_RS19580 0.70 +0.1 400,621 - ABZR86_RS19585 0.62 +0.1 400,621 - ABZR86_RS19585 0.62 -0.5 400,792 + +0.0 400,793 - -0.0 401,368 + ABZR86_RS19590 0.42 -0.3 401,369 - ABZR86_RS19590 0.42 +0.3 401,369 - ABZR86_RS19590 0.42 +0.0 401,450 - ABZR86_RS19590 0.49 -0.3 401,450 - ABZR86_RS19590 0.49 -0.1 401,450 - ABZR86_RS19590 0.49 +0.3 401,450 - ABZR86_RS19590 0.49 +0.4
Or see this region's nucleotide sequence