Experiment: D-Cycloserine 0.032 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS16455 and ABZR86_RS16460 overlap by 4 nucleotides ABZR86_RS16460 and ABZR86_RS16465 overlap by 4 nucleotides
ABZR86_RS16455: ABZR86_RS16455 - alpha/beta hydrolase, at 3,715,559 to 3,717,154
_RS16455
ABZR86_RS16460: ABZR86_RS16460 - ATP-binding cassette domain-containing protein, at 3,717,151 to 3,717,885
_RS16460
ABZR86_RS16465: ABZR86_RS16465 - ABC transporter permease, at 3,717,882 to 3,719,087
_RS16465
Position (kb)
3717
3718 Strain fitness (log2 ratio)
-2
-1
0
1 at 3716.189 kb on + strand, within ABZR86_RS16455 at 3716.189 kb on + strand, within ABZR86_RS16455 at 3716.189 kb on + strand, within ABZR86_RS16455 at 3716.189 kb on + strand, within ABZR86_RS16455 at 3716.189 kb on + strand, within ABZR86_RS16455 at 3716.190 kb on - strand, within ABZR86_RS16455 at 3716.190 kb on - strand, within ABZR86_RS16455 at 3716.273 kb on + strand, within ABZR86_RS16455 at 3716.274 kb on - strand, within ABZR86_RS16455 at 3716.297 kb on + strand, within ABZR86_RS16455 at 3716.298 kb on - strand, within ABZR86_RS16455 at 3716.298 kb on - strand, within ABZR86_RS16455 at 3716.298 kb on - strand, within ABZR86_RS16455 at 3716.477 kb on + strand, within ABZR86_RS16455 at 3716.540 kb on + strand, within ABZR86_RS16455 at 3716.540 kb on + strand, within ABZR86_RS16455 at 3716.540 kb on + strand, within ABZR86_RS16455 at 3716.541 kb on - strand, within ABZR86_RS16455 at 3716.541 kb on - strand, within ABZR86_RS16455 at 3716.570 kb on + strand, within ABZR86_RS16455 at 3716.570 kb on + strand, within ABZR86_RS16455 at 3716.603 kb on + strand, within ABZR86_RS16455 at 3716.604 kb on - strand, within ABZR86_RS16455 at 3717.292 kb on + strand, within ABZR86_RS16460 at 3717.292 kb on + strand, within ABZR86_RS16460 at 3717.292 kb on + strand, within ABZR86_RS16460 at 3717.292 kb on + strand, within ABZR86_RS16460 at 3717.293 kb on - strand, within ABZR86_RS16460 at 3717.293 kb on - strand, within ABZR86_RS16460 at 3717.406 kb on + strand, within ABZR86_RS16460 at 3717.406 kb on + strand, within ABZR86_RS16460 at 3717.406 kb on + strand, within ABZR86_RS16460 at 3717.406 kb on + strand, within ABZR86_RS16460 at 3717.406 kb on + strand, within ABZR86_RS16460 at 3717.407 kb on - strand, within ABZR86_RS16460 at 3717.407 kb on - strand, within ABZR86_RS16460 at 3717.407 kb on - strand, within ABZR86_RS16460 at 3717.440 kb on - strand, within ABZR86_RS16460 at 3717.440 kb on - strand, within ABZR86_RS16460 at 3717.440 kb on - strand, within ABZR86_RS16460 at 3717.538 kb on - strand, within ABZR86_RS16460 at 3717.758 kb on + strand, within ABZR86_RS16460 at 3717.758 kb on + strand, within ABZR86_RS16460 at 3717.758 kb on + strand, within ABZR86_RS16460 at 3717.758 kb on + strand, within ABZR86_RS16460 at 3717.759 kb on - strand, within ABZR86_RS16460 at 3717.759 kb on - strand, within ABZR86_RS16460 at 3717.931 kb on + strand at 3717.931 kb on + strand at 3717.932 kb on - strand at 3717.932 kb on - strand at 3718.227 kb on + strand, within ABZR86_RS16465 at 3718.227 kb on + strand, within ABZR86_RS16465 at 3718.228 kb on - strand, within ABZR86_RS16465 at 3718.338 kb on + strand, within ABZR86_RS16465 at 3718.474 kb on - strand, within ABZR86_RS16465 at 3718.509 kb on + strand, within ABZR86_RS16465 at 3718.509 kb on + strand, within ABZR86_RS16465 at 3718.509 kb on + strand, within ABZR86_RS16465 at 3718.509 kb on + strand, within ABZR86_RS16465 at 3718.509 kb on + strand, within ABZR86_RS16465 at 3718.509 kb on + strand, within ABZR86_RS16465 at 3718.509 kb on + strand, within ABZR86_RS16465 at 3718.510 kb on - strand, within ABZR86_RS16465 at 3718.510 kb on - strand, within ABZR86_RS16465 at 3718.510 kb on - strand, within ABZR86_RS16465 at 3718.510 kb on - strand, within ABZR86_RS16465 at 3718.510 kb on - strand, within ABZR86_RS16465 at 3718.510 kb on - strand, within ABZR86_RS16465 at 3718.510 kb on - strand, within ABZR86_RS16465 at 3718.634 kb on + strand, within ABZR86_RS16465 at 3718.833 kb on + strand, within ABZR86_RS16465 at 3718.833 kb on + strand, within ABZR86_RS16465 at 3718.833 kb on + strand, within ABZR86_RS16465 at 3718.833 kb on + strand, within ABZR86_RS16465 at 3718.833 kb on + strand, within ABZR86_RS16465 at 3718.833 kb on + strand, within ABZR86_RS16465 at 3718.833 kb on + strand, within ABZR86_RS16465 at 3718.834 kb on - strand, within ABZR86_RS16465 at 3718.834 kb on - strand, within ABZR86_RS16465 at 3718.834 kb on - strand, within ABZR86_RS16465 at 3718.834 kb on - strand, within ABZR86_RS16465
Per-strain Table
Position Strand Gene LocusTag Fraction D-Cycloserine 0.032 mg/ml remove 3,716,189 + ABZR86_RS16455 0.39 +0.1 3,716,189 + ABZR86_RS16455 0.39 +0.1 3,716,189 + ABZR86_RS16455 0.39 -0.3 3,716,189 + ABZR86_RS16455 0.39 +0.5 3,716,189 + ABZR86_RS16455 0.39 +0.2 3,716,190 - ABZR86_RS16455 0.40 -0.5 3,716,190 - ABZR86_RS16455 0.40 -1.0 3,716,273 + ABZR86_RS16455 0.45 -0.5 3,716,274 - ABZR86_RS16455 0.45 -0.4 3,716,297 + ABZR86_RS16455 0.46 +0.0 3,716,298 - ABZR86_RS16455 0.46 +1.1 3,716,298 - ABZR86_RS16455 0.46 +0.2 3,716,298 - ABZR86_RS16455 0.46 +0.7 3,716,477 + ABZR86_RS16455 0.58 +0.7 3,716,540 + ABZR86_RS16455 0.61 -0.0 3,716,540 + ABZR86_RS16455 0.61 -0.3 3,716,540 + ABZR86_RS16455 0.61 +0.1 3,716,541 - ABZR86_RS16455 0.62 +0.5 3,716,541 - ABZR86_RS16455 0.62 -0.2 3,716,570 + ABZR86_RS16455 0.63 +0.3 3,716,570 + ABZR86_RS16455 0.63 +0.5 3,716,603 + ABZR86_RS16455 0.65 -0.2 3,716,604 - ABZR86_RS16455 0.65 +0.8 3,717,292 + ABZR86_RS16460 0.19 +0.4 3,717,292 + ABZR86_RS16460 0.19 -0.3 3,717,292 + ABZR86_RS16460 0.19 -0.9 3,717,292 + ABZR86_RS16460 0.19 +0.4 3,717,293 - ABZR86_RS16460 0.19 -0.8 3,717,293 - ABZR86_RS16460 0.19 -0.7 3,717,406 + ABZR86_RS16460 0.35 -0.7 3,717,406 + ABZR86_RS16460 0.35 -0.6 3,717,406 + ABZR86_RS16460 0.35 +0.2 3,717,406 + ABZR86_RS16460 0.35 -0.5 3,717,406 + ABZR86_RS16460 0.35 -0.2 3,717,407 - ABZR86_RS16460 0.35 +0.7 3,717,407 - ABZR86_RS16460 0.35 +0.5 3,717,407 - ABZR86_RS16460 0.35 -0.0 3,717,440 - ABZR86_RS16460 0.39 -0.0 3,717,440 - ABZR86_RS16460 0.39 -0.1 3,717,440 - ABZR86_RS16460 0.39 +0.1 3,717,538 - ABZR86_RS16460 0.53 -0.2 3,717,758 + ABZR86_RS16460 0.83 -0.3 3,717,758 + ABZR86_RS16460 0.83 -0.3 3,717,758 + ABZR86_RS16460 0.83 -0.1 3,717,758 + ABZR86_RS16460 0.83 -1.8 3,717,759 - ABZR86_RS16460 0.83 +0.5 3,717,759 - ABZR86_RS16460 0.83 -0.0 3,717,931 + -0.3 3,717,931 + +0.1 3,717,932 - -0.8 3,717,932 - -0.4 3,718,227 + ABZR86_RS16465 0.29 +0.4 3,718,227 + ABZR86_RS16465 0.29 +0.1 3,718,228 - ABZR86_RS16465 0.29 +0.1 3,718,338 + ABZR86_RS16465 0.38 -0.2 3,718,474 - ABZR86_RS16465 0.49 +0.4 3,718,509 + ABZR86_RS16465 0.52 -0.7 3,718,509 + ABZR86_RS16465 0.52 +0.1 3,718,509 + ABZR86_RS16465 0.52 +0.1 3,718,509 + ABZR86_RS16465 0.52 +0.1 3,718,509 + ABZR86_RS16465 0.52 -0.7 3,718,509 + ABZR86_RS16465 0.52 -1.6 3,718,509 + ABZR86_RS16465 0.52 -0.3 3,718,510 - ABZR86_RS16465 0.52 -0.7 3,718,510 - ABZR86_RS16465 0.52 -0.4 3,718,510 - ABZR86_RS16465 0.52 -0.4 3,718,510 - ABZR86_RS16465 0.52 -0.6 3,718,510 - ABZR86_RS16465 0.52 -0.2 3,718,510 - ABZR86_RS16465 0.52 -0.2 3,718,510 - ABZR86_RS16465 0.52 -0.0 3,718,634 + ABZR86_RS16465 0.62 -0.2 3,718,833 + ABZR86_RS16465 0.79 -0.6 3,718,833 + ABZR86_RS16465 0.79 -0.2 3,718,833 + ABZR86_RS16465 0.79 +0.3 3,718,833 + ABZR86_RS16465 0.79 +0.0 3,718,833 + ABZR86_RS16465 0.79 -0.6 3,718,833 + ABZR86_RS16465 0.79 -0.0 3,718,833 + ABZR86_RS16465 0.79 -0.3 3,718,834 - ABZR86_RS16465 0.79 -0.9 3,718,834 - ABZR86_RS16465 0.79 +0.5 3,718,834 - ABZR86_RS16465 0.79 +0.4 3,718,834 - ABZR86_RS16465 0.79 -0.0
Or see this region's nucleotide sequence