Strain Fitness in Dyella japonica UNC79MFTsu3.2 around ABZR86_RS16170

Experiment: D-Cycloserine 0.032 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABZR86_RS16165 and ABZR86_RS16170 overlap by 4 nucleotidesABZR86_RS16170 and ABZR86_RS16175 are separated by 345 nucleotides ABZR86_RS16165: ABZR86_RS16165 - diguanylate cyclase, at 3,651,447 to 3,653,255 _RS16165 ABZR86_RS16170: ABZR86_RS16170 - hypothetical protein, at 3,653,252 to 3,653,539 _RS16170 ABZR86_RS16175: ABZR86_RS16175 - hypothetical protein, at 3,653,885 to 3,654,145 _RS16175 Position (kb) 3653 3654Strain fitness (log2 ratio) -1 0 1 2at 3652.258 kb on + strand, within ABZR86_RS16165at 3652.258 kb on + strand, within ABZR86_RS16165at 3652.258 kb on + strand, within ABZR86_RS16165at 3652.258 kb on + strand, within ABZR86_RS16165at 3652.258 kb on + strand, within ABZR86_RS16165at 3652.258 kb on + strand, within ABZR86_RS16165at 3652.258 kb on + strand, within ABZR86_RS16165at 3652.258 kb on + strand, within ABZR86_RS16165at 3652.258 kb on + strand, within ABZR86_RS16165at 3652.259 kb on - strand, within ABZR86_RS16165at 3652.259 kb on - strand, within ABZR86_RS16165at 3652.259 kb on - strand, within ABZR86_RS16165at 3652.259 kb on - strand, within ABZR86_RS16165at 3652.259 kb on - strand, within ABZR86_RS16165at 3652.270 kb on + strand, within ABZR86_RS16165at 3652.271 kb on - strand, within ABZR86_RS16165at 3652.316 kb on - strand, within ABZR86_RS16165at 3652.327 kb on + strand, within ABZR86_RS16165at 3652.328 kb on - strand, within ABZR86_RS16165at 3652.328 kb on - strand, within ABZR86_RS16165at 3652.351 kb on + strand, within ABZR86_RS16165at 3652.495 kb on + strand, within ABZR86_RS16165at 3652.495 kb on + strand, within ABZR86_RS16165at 3652.574 kb on + strand, within ABZR86_RS16165at 3652.574 kb on + strand, within ABZR86_RS16165at 3652.574 kb on + strand, within ABZR86_RS16165at 3652.583 kb on - strand, within ABZR86_RS16165at 3652.660 kb on + strand, within ABZR86_RS16165at 3652.738 kb on + strand, within ABZR86_RS16165at 3652.739 kb on - strand, within ABZR86_RS16165at 3652.739 kb on - strand, within ABZR86_RS16165at 3652.877 kb on - strand, within ABZR86_RS16165at 3652.898 kb on + strand, within ABZR86_RS16165at 3652.898 kb on + strand, within ABZR86_RS16165at 3652.987 kb on + strand, within ABZR86_RS16165at 3652.988 kb on - strand, within ABZR86_RS16165at 3652.996 kb on + strand, within ABZR86_RS16165at 3652.996 kb on + strand, within ABZR86_RS16165at 3652.997 kb on - strand, within ABZR86_RS16165at 3652.999 kb on + strand, within ABZR86_RS16165at 3652.999 kb on + strand, within ABZR86_RS16165at 3652.999 kb on + strand, within ABZR86_RS16165at 3652.999 kb on + strand, within ABZR86_RS16165at 3653.000 kb on - strand, within ABZR86_RS16165at 3653.000 kb on - strand, within ABZR86_RS16165at 3653.000 kb on - strand, within ABZR86_RS16165at 3653.023 kb on + strand, within ABZR86_RS16165at 3653.648 kb on + strandat 3653.794 kb on + strandat 3653.794 kb on + strandat 3653.845 kb on + strandat 3653.845 kb on + strandat 3653.845 kb on + strandat 3653.845 kb on + strandat 3653.845 kb on + strandat 3653.845 kb on + strandat 3653.845 kb on + strandat 3653.845 kb on + strandat 3653.845 kb on + strandat 3653.845 kb on + strandat 3653.846 kb on - strandat 3653.846 kb on - strandat 3654.233 kb on + strandat 3654.233 kb on + strandat 3654.258 kb on + strandat 3654.258 kb on + strandat 3654.258 kb on + strandat 3654.258 kb on + strandat 3654.259 kb on - strandat 3654.259 kb on - strandat 3654.259 kb on - strandat 3654.259 kb on - strandat 3654.259 kb on - strandat 3654.260 kb on + strandat 3654.260 kb on + strandat 3654.260 kb on + strandat 3654.260 kb on + strandat 3654.260 kb on + strandat 3654.260 kb on + strandat 3654.261 kb on - strandat 3654.261 kb on - strandat 3654.261 kb on - strandat 3654.261 kb on - strandat 3654.320 kb on + strandat 3654.376 kb on + strandat 3654.377 kb on - strandat 3654.377 kb on - strandat 3654.401 kb on + strandat 3654.474 kb on + strandat 3654.475 kb on - strandat 3654.475 kb on - strandat 3654.475 kb on - strandat 3654.475 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Cycloserine 0.032 mg/ml
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3,652,258 + ABZR86_RS16165 0.45 +0.0
3,652,258 + ABZR86_RS16165 0.45 +1.3
3,652,258 + ABZR86_RS16165 0.45 -0.5
3,652,258 + ABZR86_RS16165 0.45 -0.1
3,652,258 + ABZR86_RS16165 0.45 +0.2
3,652,258 + ABZR86_RS16165 0.45 +0.3
3,652,258 + ABZR86_RS16165 0.45 -0.1
3,652,258 + ABZR86_RS16165 0.45 +1.4
3,652,258 + ABZR86_RS16165 0.45 -0.3
3,652,259 - ABZR86_RS16165 0.45 -0.6
3,652,259 - ABZR86_RS16165 0.45 +0.1
3,652,259 - ABZR86_RS16165 0.45 +0.2
3,652,259 - ABZR86_RS16165 0.45 +0.8
3,652,259 - ABZR86_RS16165 0.45 -0.4
3,652,270 + ABZR86_RS16165 0.45 +0.3
3,652,271 - ABZR86_RS16165 0.46 +1.8
3,652,316 - ABZR86_RS16165 0.48 -1.5
3,652,327 + ABZR86_RS16165 0.49 +0.1
3,652,328 - ABZR86_RS16165 0.49 +0.6
3,652,328 - ABZR86_RS16165 0.49 +0.1
3,652,351 + ABZR86_RS16165 0.50 +1.1
3,652,495 + ABZR86_RS16165 0.58 +0.7
3,652,495 + ABZR86_RS16165 0.58 -1.3
3,652,574 + ABZR86_RS16165 0.62 +0.4
3,652,574 + ABZR86_RS16165 0.62 +1.0
3,652,574 + ABZR86_RS16165 0.62 +0.1
3,652,583 - ABZR86_RS16165 0.63 -0.4
3,652,660 + ABZR86_RS16165 0.67 +0.9
3,652,738 + ABZR86_RS16165 0.71 +0.2
3,652,739 - ABZR86_RS16165 0.71 +0.5
3,652,739 - ABZR86_RS16165 0.71 +1.1
3,652,877 - ABZR86_RS16165 0.79 -0.2
3,652,898 + ABZR86_RS16165 0.80 -1.1
3,652,898 + ABZR86_RS16165 0.80 -0.8
3,652,987 + ABZR86_RS16165 0.85 +0.4
3,652,988 - ABZR86_RS16165 0.85 +0.0
3,652,996 + ABZR86_RS16165 0.86 +0.3
3,652,996 + ABZR86_RS16165 0.86 +1.1
3,652,997 - ABZR86_RS16165 0.86 -0.1
3,652,999 + ABZR86_RS16165 0.86 +0.0
3,652,999 + ABZR86_RS16165 0.86 -0.7
3,652,999 + ABZR86_RS16165 0.86 +0.4
3,652,999 + ABZR86_RS16165 0.86 -0.4
3,653,000 - ABZR86_RS16165 0.86 +0.4
3,653,000 - ABZR86_RS16165 0.86 -1.1
3,653,000 - ABZR86_RS16165 0.86 +0.4
3,653,023 + ABZR86_RS16165 0.87 +0.7
3,653,648 + -0.1
3,653,794 + +0.0
3,653,794 + +0.1
3,653,845 + -0.0
3,653,845 + +0.4
3,653,845 + +0.5
3,653,845 + +0.5
3,653,845 + +0.4
3,653,845 + +0.5
3,653,845 + +0.3
3,653,845 + -0.1
3,653,845 + -0.2
3,653,845 + -0.9
3,653,846 - +0.4
3,653,846 - +0.6
3,654,233 + -0.4
3,654,233 + -0.0
3,654,258 + -0.2
3,654,258 + -0.0
3,654,258 + -0.1
3,654,258 + +0.2
3,654,259 - -0.8
3,654,259 - -0.5
3,654,259 - -0.3
3,654,259 - +1.5
3,654,259 - -0.3
3,654,260 + +0.2
3,654,260 + -0.6
3,654,260 + +0.1
3,654,260 + +0.5
3,654,260 + -0.1
3,654,260 + +0.1
3,654,261 - +0.1
3,654,261 - +0.1
3,654,261 - -0.0
3,654,261 - +0.6
3,654,320 + +0.6
3,654,376 + -0.1
3,654,377 - -0.6
3,654,377 - -0.2
3,654,401 + +0.3
3,654,474 + +0.0
3,654,475 - +0.2
3,654,475 - +0.3
3,654,475 - +0.3
3,654,475 - +0.3

Or see this region's nucleotide sequence