Experiment: D-Cycloserine 0.032 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS07215 and ABZR86_RS07220 are separated by 173 nucleotides ABZR86_RS07220 and ABZR86_RS07225 are separated by 193 nucleotides ABZR86_RS07225 and ABZR86_RS07230 are separated by 15 nucleotides ABZR86_RS07230 and ABZR86_RS07235 are separated by 88 nucleotides ABZR86_RS07235 and ABZR86_RS07240 are separated by 79 nucleotides
ABZR86_RS07215: ABZR86_RS07215 - FKBP-type peptidyl-prolyl cis-trans isomerase, at 1,590,110 to 1,590,883
_RS07215
ABZR86_RS07220: ABZR86_RS07220 - cation:proton antiporter, at 1,591,057 to 1,592,823
_RS07220
ABZR86_RS07225: ABZR86_RS07225 - tRNA-Ala, at 1,593,017 to 1,593,092
_RS07225
ABZR86_RS07230: ABZR86_RS07230 - tRNA-Glu, at 1,593,108 to 1,593,183
_RS07230
ABZR86_RS07235: ABZR86_RS07235 - tRNA-Asp, at 1,593,272 to 1,593,348
_RS07235
ABZR86_RS07240: ABZR86_RS07240 - DUF1249 domain-containing protein, at 1,593,428 to 1,593,928
_RS07240
Position (kb) 1591
1592
1593 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 1590.111 kb on + strand at 1590.111 kb on + strand at 1590.112 kb on - strand at 1590.112 kb on - strand at 1590.112 kb on - strand at 1590.112 kb on - strand at 1590.229 kb on - strand, within ABZR86_RS07215 at 1590.258 kb on + strand, within ABZR86_RS07215 at 1590.259 kb on - strand, within ABZR86_RS07215 at 1590.399 kb on + strand, within ABZR86_RS07215 at 1590.399 kb on + strand, within ABZR86_RS07215 at 1590.399 kb on + strand, within ABZR86_RS07215 at 1590.519 kb on + strand, within ABZR86_RS07215 at 1590.520 kb on - strand, within ABZR86_RS07215 at 1590.562 kb on - strand, within ABZR86_RS07215 at 1590.562 kb on - strand, within ABZR86_RS07215 at 1590.748 kb on - strand, within ABZR86_RS07215 at 1590.978 kb on + strand at 1590.978 kb on + strand at 1590.978 kb on + strand at 1590.978 kb on + strand at 1590.979 kb on - strand at 1590.979 kb on - strand at 1590.979 kb on - strand at 1591.011 kb on + strand at 1591.011 kb on + strand at 1591.011 kb on + strand at 1591.012 kb on - strand at 1591.012 kb on - strand at 1591.012 kb on - strand at 1591.012 kb on - strand at 1591.013 kb on + strand at 1591.013 kb on + strand at 1591.013 kb on + strand at 1591.013 kb on + strand at 1591.013 kb on + strand at 1591.013 kb on + strand at 1591.014 kb on - strand at 1591.014 kb on - strand at 1591.014 kb on - strand at 1591.014 kb on - strand at 1591.014 kb on - strand at 1591.014 kb on - strand at 1591.014 kb on - strand at 1591.014 kb on - strand at 1591.014 kb on - strand at 1591.014 kb on - strand at 1591.373 kb on + strand, within ABZR86_RS07220 at 1591.484 kb on + strand, within ABZR86_RS07220 at 1591.485 kb on - strand, within ABZR86_RS07220 at 1591.485 kb on - strand, within ABZR86_RS07220 at 1591.485 kb on - strand, within ABZR86_RS07220 at 1591.490 kb on + strand, within ABZR86_RS07220 at 1591.491 kb on - strand, within ABZR86_RS07220 at 1591.491 kb on - strand, within ABZR86_RS07220 at 1591.491 kb on - strand, within ABZR86_RS07220 at 1591.617 kb on + strand, within ABZR86_RS07220 at 1591.617 kb on + strand, within ABZR86_RS07220 at 1591.617 kb on + strand, within ABZR86_RS07220 at 1591.619 kb on + strand, within ABZR86_RS07220 at 1591.619 kb on + strand, within ABZR86_RS07220 at 1591.619 kb on + strand, within ABZR86_RS07220 at 1591.619 kb on + strand, within ABZR86_RS07220 at 1591.619 kb on + strand, within ABZR86_RS07220 at 1591.619 kb on + strand, within ABZR86_RS07220 at 1591.620 kb on - strand, within ABZR86_RS07220 at 1591.620 kb on - strand, within ABZR86_RS07220 at 1591.620 kb on - strand, within ABZR86_RS07220 at 1591.620 kb on - strand, within ABZR86_RS07220 at 1591.620 kb on - strand, within ABZR86_RS07220 at 1591.620 kb on - strand, within ABZR86_RS07220 at 1591.620 kb on - strand, within ABZR86_RS07220 at 1591.700 kb on + strand, within ABZR86_RS07220 at 1591.701 kb on - strand, within ABZR86_RS07220 at 1591.707 kb on + strand, within ABZR86_RS07220 at 1591.707 kb on + strand, within ABZR86_RS07220 at 1591.707 kb on + strand, within ABZR86_RS07220 at 1591.707 kb on + strand, within ABZR86_RS07220 at 1591.708 kb on - strand, within ABZR86_RS07220 at 1591.708 kb on - strand, within ABZR86_RS07220 at 1591.748 kb on + strand, within ABZR86_RS07220 at 1591.765 kb on + strand, within ABZR86_RS07220 at 1591.766 kb on - strand, within ABZR86_RS07220 at 1591.875 kb on + strand, within ABZR86_RS07220 at 1591.876 kb on - strand, within ABZR86_RS07220 at 1591.912 kb on + strand, within ABZR86_RS07220 at 1591.912 kb on + strand, within ABZR86_RS07220 at 1591.912 kb on + strand, within ABZR86_RS07220 at 1591.912 kb on + strand, within ABZR86_RS07220 at 1591.913 kb on - strand, within ABZR86_RS07220 at 1591.913 kb on - strand, within ABZR86_RS07220 at 1591.944 kb on - strand, within ABZR86_RS07220 at 1591.944 kb on - strand, within ABZR86_RS07220 at 1591.944 kb on - strand, within ABZR86_RS07220 at 1592.102 kb on + strand, within ABZR86_RS07220 at 1592.102 kb on + strand, within ABZR86_RS07220 at 1592.103 kb on - strand, within ABZR86_RS07220 at 1592.103 kb on - strand, within ABZR86_RS07220 at 1592.192 kb on + strand, within ABZR86_RS07220 at 1592.192 kb on + strand, within ABZR86_RS07220 at 1592.192 kb on + strand, within ABZR86_RS07220 at 1592.192 kb on + strand, within ABZR86_RS07220 at 1592.192 kb on + strand, within ABZR86_RS07220 at 1592.192 kb on + strand, within ABZR86_RS07220 at 1592.192 kb on + strand, within ABZR86_RS07220 at 1592.193 kb on - strand, within ABZR86_RS07220 at 1592.193 kb on - strand, within ABZR86_RS07220 at 1592.193 kb on - strand, within ABZR86_RS07220 at 1592.193 kb on - strand, within ABZR86_RS07220 at 1592.193 kb on - strand, within ABZR86_RS07220 at 1592.193 kb on - strand, within ABZR86_RS07220 at 1592.193 kb on - strand, within ABZR86_RS07220 at 1592.193 kb on - strand, within ABZR86_RS07220 at 1592.193 kb on - strand, within ABZR86_RS07220 at 1592.690 kb on + strand at 1592.690 kb on + strand at 1592.690 kb on + strand at 1592.720 kb on + strand at 1592.720 kb on + strand at 1592.721 kb on - strand at 1592.721 kb on - strand at 1592.721 kb on - strand at 1592.721 kb on - strand at 1592.721 kb on - strand at 1592.854 kb on + strand at 1592.854 kb on + strand at 1592.855 kb on - strand at 1592.855 kb on - strand at 1592.855 kb on - strand at 1592.881 kb on + strand at 1592.881 kb on + strand at 1592.882 kb on - strand at 1592.882 kb on - strand at 1593.095 kb on + strand at 1593.246 kb on + strand at 1593.292 kb on + strand, within ABZR86_RS07235 at 1593.429 kb on + strand at 1593.429 kb on + strand at 1593.429 kb on + strand at 1593.430 kb on - strand at 1593.430 kb on - strand at 1593.430 kb on - strand at 1593.517 kb on - strand, within ABZR86_RS07240 at 1593.517 kb on - strand, within ABZR86_RS07240 at 1593.517 kb on - strand, within ABZR86_RS07240 at 1593.657 kb on + strand, within ABZR86_RS07240 at 1593.657 kb on + strand, within ABZR86_RS07240 at 1593.657 kb on + strand, within ABZR86_RS07240 at 1593.657 kb on + strand, within ABZR86_RS07240 at 1593.657 kb on + strand, within ABZR86_RS07240 at 1593.657 kb on + strand, within ABZR86_RS07240 at 1593.657 kb on + strand, within ABZR86_RS07240 at 1593.658 kb on - strand, within ABZR86_RS07240 at 1593.658 kb on - strand, within ABZR86_RS07240 at 1593.658 kb on - strand, within ABZR86_RS07240 at 1593.658 kb on - strand, within ABZR86_RS07240 at 1593.658 kb on - strand, within ABZR86_RS07240 at 1593.658 kb on - strand, within ABZR86_RS07240 at 1593.714 kb on + strand, within ABZR86_RS07240 at 1593.714 kb on + strand, within ABZR86_RS07240 at 1593.715 kb on - strand, within ABZR86_RS07240 at 1593.715 kb on - strand, within ABZR86_RS07240 at 1593.736 kb on + strand, within ABZR86_RS07240 at 1593.736 kb on + strand, within ABZR86_RS07240 at 1593.736 kb on + strand, within ABZR86_RS07240 at 1593.736 kb on + strand, within ABZR86_RS07240 at 1593.736 kb on + strand, within ABZR86_RS07240 at 1593.736 kb on + strand, within ABZR86_RS07240 at 1593.737 kb on - strand, within ABZR86_RS07240 at 1593.737 kb on - strand, within ABZR86_RS07240 at 1593.738 kb on + strand, within ABZR86_RS07240 at 1593.738 kb on + strand, within ABZR86_RS07240 at 1593.738 kb on + strand, within ABZR86_RS07240 at 1593.738 kb on + strand, within ABZR86_RS07240 at 1593.739 kb on - strand, within ABZR86_RS07240 at 1593.739 kb on - strand, within ABZR86_RS07240 at 1593.739 kb on - strand, within ABZR86_RS07240 at 1593.739 kb on - strand, within ABZR86_RS07240 at 1593.739 kb on - strand, within ABZR86_RS07240 at 1593.739 kb on - strand, within ABZR86_RS07240 at 1593.739 kb on - strand, within ABZR86_RS07240 at 1593.798 kb on + strand, within ABZR86_RS07240 at 1593.798 kb on + strand, within ABZR86_RS07240 at 1593.798 kb on + strand, within ABZR86_RS07240 at 1593.798 kb on + strand, within ABZR86_RS07240 at 1593.798 kb on + strand, within ABZR86_RS07240 at 1593.798 kb on + strand, within ABZR86_RS07240 at 1593.798 kb on + strand, within ABZR86_RS07240 at 1593.798 kb on + strand, within ABZR86_RS07240 at 1593.798 kb on + strand, within ABZR86_RS07240 at 1593.798 kb on + strand, within ABZR86_RS07240 at 1593.798 kb on + strand, within ABZR86_RS07240 at 1593.798 kb on + strand, within ABZR86_RS07240 at 1593.798 kb on + strand, within ABZR86_RS07240 at 1593.798 kb on + strand, within ABZR86_RS07240 at 1593.798 kb on + strand, within ABZR86_RS07240 at 1593.798 kb on + strand, within ABZR86_RS07240 at 1593.799 kb on - strand, within ABZR86_RS07240 at 1593.799 kb on - strand, within ABZR86_RS07240 at 1593.799 kb on - strand, within ABZR86_RS07240 at 1593.799 kb on - strand, within ABZR86_RS07240 at 1593.799 kb on - strand, within ABZR86_RS07240 at 1593.799 kb on - strand, within ABZR86_RS07240 at 1593.799 kb on - strand, within ABZR86_RS07240 at 1593.799 kb on - strand, within ABZR86_RS07240 at 1593.799 kb on - strand, within ABZR86_RS07240 at 1593.799 kb on - strand, within ABZR86_RS07240 at 1593.799 kb on - strand, within ABZR86_RS07240 at 1593.799 kb on - strand, within ABZR86_RS07240
Per-strain Table
Position Strand Gene LocusTag Fraction D-Cycloserine 0.032 mg/ml remove 1,590,111 + -0.1 1,590,111 + +0.1 1,590,112 - -0.2 1,590,112 - +0.4 1,590,112 - +0.1 1,590,112 - -0.9 1,590,229 - ABZR86_RS07215 0.15 -2.1 1,590,258 + ABZR86_RS07215 0.19 -1.7 1,590,259 - ABZR86_RS07215 0.19 -1.2 1,590,399 + ABZR86_RS07215 0.37 -2.3 1,590,399 + ABZR86_RS07215 0.37 -0.8 1,590,399 + ABZR86_RS07215 0.37 -1.3 1,590,519 + ABZR86_RS07215 0.53 -3.1 1,590,520 - ABZR86_RS07215 0.53 -1.1 1,590,562 - ABZR86_RS07215 0.58 -0.5 1,590,562 - ABZR86_RS07215 0.58 +0.5 1,590,748 - ABZR86_RS07215 0.82 -0.9 1,590,978 + -0.7 1,590,978 + -1.4 1,590,978 + -0.5 1,590,978 + -0.4 1,590,979 - +0.1 1,590,979 - +0.5 1,590,979 - -1.8 1,591,011 + -0.1 1,591,011 + -0.0 1,591,011 + +0.4 1,591,012 - -1.5 1,591,012 - -0.6 1,591,012 - +0.1 1,591,012 - +0.3 1,591,013 + -0.4 1,591,013 + -0.2 1,591,013 + +0.2 1,591,013 + -0.1 1,591,013 + -0.2 1,591,013 + +0.2 1,591,014 - +0.4 1,591,014 - -0.2 1,591,014 - -0.2 1,591,014 - -0.1 1,591,014 - +0.5 1,591,014 - -0.0 1,591,014 - -0.2 1,591,014 - +0.1 1,591,014 - +0.3 1,591,014 - +0.3 1,591,373 + ABZR86_RS07220 0.18 -0.9 1,591,484 + ABZR86_RS07220 0.24 -1.7 1,591,485 - ABZR86_RS07220 0.24 +0.1 1,591,485 - ABZR86_RS07220 0.24 +1.0 1,591,485 - ABZR86_RS07220 0.24 +0.6 1,591,490 + ABZR86_RS07220 0.25 +0.2 1,591,491 - ABZR86_RS07220 0.25 -0.2 1,591,491 - ABZR86_RS07220 0.25 +0.6 1,591,491 - ABZR86_RS07220 0.25 -0.0 1,591,617 + ABZR86_RS07220 0.32 -0.8 1,591,617 + ABZR86_RS07220 0.32 +0.2 1,591,617 + ABZR86_RS07220 0.32 +0.5 1,591,619 + ABZR86_RS07220 0.32 +0.6 1,591,619 + ABZR86_RS07220 0.32 -0.6 1,591,619 + ABZR86_RS07220 0.32 +1.1 1,591,619 + ABZR86_RS07220 0.32 -0.6 1,591,619 + ABZR86_RS07220 0.32 -1.0 1,591,619 + ABZR86_RS07220 0.32 -0.2 1,591,620 - ABZR86_RS07220 0.32 -0.2 1,591,620 - ABZR86_RS07220 0.32 +0.8 1,591,620 - ABZR86_RS07220 0.32 -0.5 1,591,620 - ABZR86_RS07220 0.32 +0.4 1,591,620 - ABZR86_RS07220 0.32 -0.2 1,591,620 - ABZR86_RS07220 0.32 -0.7 1,591,620 - ABZR86_RS07220 0.32 -0.2 1,591,700 + ABZR86_RS07220 0.36 +0.2 1,591,701 - ABZR86_RS07220 0.36 +0.2 1,591,707 + ABZR86_RS07220 0.37 -0.5 1,591,707 + ABZR86_RS07220 0.37 +0.1 1,591,707 + ABZR86_RS07220 0.37 +0.7 1,591,707 + ABZR86_RS07220 0.37 +0.1 1,591,708 - ABZR86_RS07220 0.37 -0.5 1,591,708 - ABZR86_RS07220 0.37 -0.3 1,591,748 + ABZR86_RS07220 0.39 -0.3 1,591,765 + ABZR86_RS07220 0.40 -0.8 1,591,766 - ABZR86_RS07220 0.40 -0.4 1,591,875 + ABZR86_RS07220 0.46 -0.1 1,591,876 - ABZR86_RS07220 0.46 +0.7 1,591,912 + ABZR86_RS07220 0.48 -1.2 1,591,912 + ABZR86_RS07220 0.48 -0.1 1,591,912 + ABZR86_RS07220 0.48 +0.1 1,591,912 + ABZR86_RS07220 0.48 -0.6 1,591,913 - ABZR86_RS07220 0.48 +0.4 1,591,913 - ABZR86_RS07220 0.48 -0.1 1,591,944 - ABZR86_RS07220 0.50 -0.3 1,591,944 - ABZR86_RS07220 0.50 -0.1 1,591,944 - ABZR86_RS07220 0.50 +0.8 1,592,102 + ABZR86_RS07220 0.59 +0.5 1,592,102 + ABZR86_RS07220 0.59 -1.3 1,592,103 - ABZR86_RS07220 0.59 -0.9 1,592,103 - ABZR86_RS07220 0.59 -0.3 1,592,192 + ABZR86_RS07220 0.64 -0.5 1,592,192 + ABZR86_RS07220 0.64 -0.1 1,592,192 + ABZR86_RS07220 0.64 +0.1 1,592,192 + ABZR86_RS07220 0.64 -0.2 1,592,192 + ABZR86_RS07220 0.64 -0.6 1,592,192 + ABZR86_RS07220 0.64 -0.8 1,592,192 + ABZR86_RS07220 0.64 -0.6 1,592,193 - ABZR86_RS07220 0.64 -0.2 1,592,193 - ABZR86_RS07220 0.64 -0.3 1,592,193 - ABZR86_RS07220 0.64 -0.9 1,592,193 - ABZR86_RS07220 0.64 -0.5 1,592,193 - ABZR86_RS07220 0.64 +0.6 1,592,193 - ABZR86_RS07220 0.64 -0.4 1,592,193 - ABZR86_RS07220 0.64 -2.6 1,592,193 - ABZR86_RS07220 0.64 -0.0 1,592,193 - ABZR86_RS07220 0.64 +0.5 1,592,690 + +2.2 1,592,690 + -0.3 1,592,690 + -0.8 1,592,720 + +1.2 1,592,720 + -0.2 1,592,721 - -0.5 1,592,721 - +0.2 1,592,721 - +1.5 1,592,721 - -0.6 1,592,721 - +0.6 1,592,854 + +0.4 1,592,854 + +0.5 1,592,855 - -0.1 1,592,855 - -0.5 1,592,855 - -0.5 1,592,881 + +0.3 1,592,881 + -0.6 1,592,882 - -0.0 1,592,882 - -0.7 1,593,095 + -0.7 1,593,246 + -1.4 1,593,292 + ABZR86_RS07235 0.26 +1.0 1,593,429 + -0.7 1,593,429 + +0.3 1,593,429 + -0.1 1,593,430 - -0.2 1,593,430 - -0.5 1,593,430 - -0.1 1,593,517 - ABZR86_RS07240 0.18 +0.2 1,593,517 - ABZR86_RS07240 0.18 +0.4 1,593,517 - ABZR86_RS07240 0.18 +0.2 1,593,657 + ABZR86_RS07240 0.46 +0.4 1,593,657 + ABZR86_RS07240 0.46 -0.2 1,593,657 + ABZR86_RS07240 0.46 +1.2 1,593,657 + ABZR86_RS07240 0.46 -0.1 1,593,657 + ABZR86_RS07240 0.46 -0.3 1,593,657 + ABZR86_RS07240 0.46 -0.2 1,593,657 + ABZR86_RS07240 0.46 +0.5 1,593,658 - ABZR86_RS07240 0.46 -0.2 1,593,658 - ABZR86_RS07240 0.46 +0.2 1,593,658 - ABZR86_RS07240 0.46 +0.4 1,593,658 - ABZR86_RS07240 0.46 +0.3 1,593,658 - ABZR86_RS07240 0.46 -0.4 1,593,658 - ABZR86_RS07240 0.46 -0.4 1,593,714 + ABZR86_RS07240 0.57 -0.1 1,593,714 + ABZR86_RS07240 0.57 -0.1 1,593,715 - ABZR86_RS07240 0.57 -0.9 1,593,715 - ABZR86_RS07240 0.57 +0.7 1,593,736 + ABZR86_RS07240 0.61 +0.2 1,593,736 + ABZR86_RS07240 0.61 +0.5 1,593,736 + ABZR86_RS07240 0.61 -0.6 1,593,736 + ABZR86_RS07240 0.61 +0.1 1,593,736 + ABZR86_RS07240 0.61 +0.1 1,593,736 + ABZR86_RS07240 0.61 -0.2 1,593,737 - ABZR86_RS07240 0.62 +0.2 1,593,737 - ABZR86_RS07240 0.62 -0.8 1,593,738 + ABZR86_RS07240 0.62 +0.3 1,593,738 + ABZR86_RS07240 0.62 +0.5 1,593,738 + ABZR86_RS07240 0.62 -0.3 1,593,738 + ABZR86_RS07240 0.62 +0.3 1,593,739 - ABZR86_RS07240 0.62 +0.4 1,593,739 - ABZR86_RS07240 0.62 -0.3 1,593,739 - ABZR86_RS07240 0.62 -0.2 1,593,739 - ABZR86_RS07240 0.62 +0.1 1,593,739 - ABZR86_RS07240 0.62 -0.3 1,593,739 - ABZR86_RS07240 0.62 +0.3 1,593,739 - ABZR86_RS07240 0.62 +0.4 1,593,798 + ABZR86_RS07240 0.74 +0.3 1,593,798 + ABZR86_RS07240 0.74 +0.5 1,593,798 + ABZR86_RS07240 0.74 +0.4 1,593,798 + ABZR86_RS07240 0.74 +0.1 1,593,798 + ABZR86_RS07240 0.74 +0.1 1,593,798 + ABZR86_RS07240 0.74 -0.3 1,593,798 + ABZR86_RS07240 0.74 +0.4 1,593,798 + ABZR86_RS07240 0.74 -0.1 1,593,798 + ABZR86_RS07240 0.74 -0.5 1,593,798 + ABZR86_RS07240 0.74 -0.3 1,593,798 + ABZR86_RS07240 0.74 -0.5 1,593,798 + ABZR86_RS07240 0.74 -0.2 1,593,798 + ABZR86_RS07240 0.74 +0.0 1,593,798 + ABZR86_RS07240 0.74 +0.6 1,593,798 + ABZR86_RS07240 0.74 -0.8 1,593,798 + ABZR86_RS07240 0.74 +0.3 1,593,799 - ABZR86_RS07240 0.74 +0.1 1,593,799 - ABZR86_RS07240 0.74 -0.2 1,593,799 - ABZR86_RS07240 0.74 -0.1 1,593,799 - ABZR86_RS07240 0.74 -0.2 1,593,799 - ABZR86_RS07240 0.74 +0.6 1,593,799 - ABZR86_RS07240 0.74 +0.2 1,593,799 - ABZR86_RS07240 0.74 -0.4 1,593,799 - ABZR86_RS07240 0.74 +0.2 1,593,799 - ABZR86_RS07240 0.74 +0.8 1,593,799 - ABZR86_RS07240 0.74 +0.0 1,593,799 - ABZR86_RS07240 0.74 +0.4 1,593,799 - ABZR86_RS07240 0.74 +1.1
Or see this region's nucleotide sequence