Experiment: D-Cycloserine 0.032 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS05265 and ABZR86_RS05270 are separated by 9 nucleotides ABZR86_RS05270 and ABZR86_RS05275 are separated by 104 nucleotides
ABZR86_RS05265: ABZR86_RS05265 - ferritin-like domain-containing protein, at 1,183,940 to 1,185,916
_RS05265
ABZR86_RS05270: ABZR86_RS05270 - alpha/beta hydrolase, at 1,185,926 to 1,186,732
_RS05270
ABZR86_RS05275: ABZR86_RS05275 - PhzF family phenazine biosynthesis protein, at 1,186,837 to 1,187,667
_RS05275
Position (kb)
1185
1186
1187 Strain fitness (log2 ratio)
-1
0
1 at 1185.283 kb on + strand, within ABZR86_RS05265 at 1185.572 kb on + strand, within ABZR86_RS05265 at 1185.573 kb on - strand, within ABZR86_RS05265 at 1185.573 kb on - strand, within ABZR86_RS05265 at 1185.586 kb on - strand, within ABZR86_RS05265 at 1185.610 kb on - strand, within ABZR86_RS05265 at 1185.610 kb on - strand, within ABZR86_RS05265 at 1186.057 kb on + strand, within ABZR86_RS05270 at 1186.140 kb on + strand, within ABZR86_RS05270 at 1186.140 kb on + strand, within ABZR86_RS05270 at 1186.140 kb on + strand, within ABZR86_RS05270 at 1186.141 kb on - strand, within ABZR86_RS05270 at 1186.144 kb on + strand, within ABZR86_RS05270 at 1186.144 kb on + strand, within ABZR86_RS05270 at 1186.145 kb on - strand, within ABZR86_RS05270 at 1186.145 kb on - strand, within ABZR86_RS05270 at 1186.481 kb on - strand, within ABZR86_RS05270 at 1186.481 kb on - strand, within ABZR86_RS05270 at 1186.481 kb on - strand, within ABZR86_RS05270 at 1186.616 kb on + strand, within ABZR86_RS05270 at 1186.616 kb on + strand, within ABZR86_RS05270 at 1186.616 kb on + strand, within ABZR86_RS05270 at 1186.617 kb on - strand, within ABZR86_RS05270 at 1186.709 kb on + strand at 1186.709 kb on + strand at 1186.709 kb on + strand at 1186.710 kb on - strand at 1186.838 kb on + strand at 1186.839 kb on - strand at 1186.975 kb on - strand, within ABZR86_RS05275 at 1187.104 kb on + strand, within ABZR86_RS05275 at 1187.104 kb on + strand, within ABZR86_RS05275 at 1187.104 kb on + strand, within ABZR86_RS05275 at 1187.104 kb on + strand, within ABZR86_RS05275 at 1187.104 kb on + strand, within ABZR86_RS05275 at 1187.105 kb on - strand, within ABZR86_RS05275 at 1187.105 kb on - strand, within ABZR86_RS05275 at 1187.105 kb on - strand, within ABZR86_RS05275
Per-strain Table
Position Strand Gene LocusTag Fraction D-Cycloserine 0.032 mg/ml remove 1,185,283 + ABZR86_RS05265 0.68 +0.0 1,185,572 + ABZR86_RS05265 0.83 -0.1 1,185,573 - ABZR86_RS05265 0.83 +0.3 1,185,573 - ABZR86_RS05265 0.83 -0.1 1,185,586 - ABZR86_RS05265 0.83 -0.1 1,185,610 - ABZR86_RS05265 0.84 -0.3 1,185,610 - ABZR86_RS05265 0.84 -0.9 1,186,057 + ABZR86_RS05270 0.16 +0.0 1,186,140 + ABZR86_RS05270 0.27 -0.1 1,186,140 + ABZR86_RS05270 0.27 -0.5 1,186,140 + ABZR86_RS05270 0.27 +0.1 1,186,141 - ABZR86_RS05270 0.27 -0.6 1,186,144 + ABZR86_RS05270 0.27 +0.3 1,186,144 + ABZR86_RS05270 0.27 -0.2 1,186,145 - ABZR86_RS05270 0.27 +0.0 1,186,145 - ABZR86_RS05270 0.27 -0.3 1,186,481 - ABZR86_RS05270 0.69 +0.3 1,186,481 - ABZR86_RS05270 0.69 +0.4 1,186,481 - ABZR86_RS05270 0.69 -0.1 1,186,616 + ABZR86_RS05270 0.86 -0.8 1,186,616 + ABZR86_RS05270 0.86 +0.4 1,186,616 + ABZR86_RS05270 0.86 -0.5 1,186,617 - ABZR86_RS05270 0.86 -0.5 1,186,709 + -0.2 1,186,709 + -0.3 1,186,709 + +0.1 1,186,710 - +0.7 1,186,838 + +0.1 1,186,839 - -0.4 1,186,975 - ABZR86_RS05275 0.17 -0.3 1,187,104 + ABZR86_RS05275 0.32 +0.1 1,187,104 + ABZR86_RS05275 0.32 -0.3 1,187,104 + ABZR86_RS05275 0.32 -0.5 1,187,104 + ABZR86_RS05275 0.32 +0.6 1,187,104 + ABZR86_RS05275 0.32 -0.3 1,187,105 - ABZR86_RS05275 0.32 -0.1 1,187,105 - ABZR86_RS05275 0.32 -0.6 1,187,105 - ABZR86_RS05275 0.32 -0.2
Or see this region's nucleotide sequence