Strain Fitness in Dyella japonica UNC79MFTsu3.2 around ABZR86_RS03295

Experiment: D-Cycloserine 0.032 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABZR86_RS03295 and ABZR86_RS03300 are separated by 1 nucleotides ABZR86_RS03295: ABZR86_RS03295 - DUF4255 domain-containing protein, at 693,306 to 693,962 _RS03295 ABZR86_RS03300: ABZR86_RS03300 - hypothetical protein, at 693,964 to 694,983 _RS03300 Position (kb) 693 694Strain fitness (log2 ratio) -1 0 1at 692.547 kb on - strandat 692.604 kb on + strandat 692.623 kb on - strandat 692.704 kb on + strandat 692.705 kb on - strandat 692.705 kb on - strandat 692.711 kb on + strandat 692.810 kb on + strandat 692.817 kb on + strandat 692.903 kb on - strandat 693.175 kb on + strandat 693.175 kb on + strandat 693.176 kb on - strandat 693.367 kb on - strandat 693.615 kb on + strand, within ABZR86_RS03295at 693.616 kb on - strand, within ABZR86_RS03295at 693.772 kb on - strand, within ABZR86_RS03295at 693.843 kb on + strand, within ABZR86_RS03295at 693.844 kb on - strand, within ABZR86_RS03295at 693.921 kb on - strandat 693.989 kb on - strandat 693.989 kb on - strandat 694.024 kb on + strandat 694.024 kb on + strandat 694.282 kb on + strand, within ABZR86_RS03300at 694.282 kb on + strand, within ABZR86_RS03300at 694.712 kb on + strand, within ABZR86_RS03300at 694.820 kb on - strand, within ABZR86_RS03300

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Cycloserine 0.032 mg/ml
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692,547 - +0.0
692,604 + -0.4
692,623 - -1.0
692,704 + -0.3
692,705 - -0.5
692,705 - +0.6
692,711 + +1.4
692,810 + -0.4
692,817 + -0.3
692,903 - +0.6
693,175 + +0.9
693,175 + -0.4
693,176 - -1.0
693,367 - -0.0
693,615 + ABZR86_RS03295 0.47 +0.5
693,616 - ABZR86_RS03295 0.47 -1.3
693,772 - ABZR86_RS03295 0.71 -0.7
693,843 + ABZR86_RS03295 0.82 +0.4
693,844 - ABZR86_RS03295 0.82 -0.5
693,921 - +0.5
693,989 - +0.1
693,989 - -0.1
694,024 + +0.9
694,024 + -0.6
694,282 + ABZR86_RS03300 0.31 -0.3
694,282 + ABZR86_RS03300 0.31 -0.4
694,712 + ABZR86_RS03300 0.73 +0.2
694,820 - ABZR86_RS03300 0.84 +0.5

Or see this region's nucleotide sequence