Experiment: D-Cycloserine 0.032 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS00790 and ABZR86_RS00795 are separated by 85 nucleotides ABZR86_RS00795 and ABZR86_RS00800 are separated by 47 nucleotides ABZR86_RS00800 and ABZR86_RS00805 are separated by 166 nucleotides ABZR86_RS00805 and ABZR86_RS00810 overlap by 4 nucleotides ABZR86_RS00810 and ABZR86_RS00815 are separated by 66 nucleotides
ABZR86_RS00790: ABZR86_RS00790 - hypothetical protein, at 154,891 to 155,487
_RS00790
ABZR86_RS00795: ABZR86_RS00795 - ferredoxin FdxA, at 155,573 to 155,896
_RS00795
ABZR86_RS00800: ABZR86_RS00800 - tRNA-Glu, at 155,944 to 156,019
_RS00800
ABZR86_RS00805: ABZR86_RS00805 - polynucleotide adenylyltransferase PcnB, at 156,186 to 157,562
_RS00805
ABZR86_RS00810: ABZR86_RS00810 - 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase, at 157,559 to 158,041
_RS00810
ABZR86_RS00815: ABZR86_RS00815 - 3-methyl-2-oxobutanoate hydroxymethyltransferase, at 158,108 to 158,938
_RS00815
Position (kb) 156
157
158 Strain fitness (log2 ratio) -1
0
1 at 155.251 kb on + strand, within ABZR86_RS00790 at 155.251 kb on + strand, within ABZR86_RS00790 at 155.251 kb on + strand, within ABZR86_RS00790 at 155.251 kb on + strand, within ABZR86_RS00790 at 155.252 kb on - strand, within ABZR86_RS00790 at 155.253 kb on + strand, within ABZR86_RS00790 at 155.253 kb on + strand, within ABZR86_RS00790 at 155.253 kb on + strand, within ABZR86_RS00790 at 155.253 kb on + strand, within ABZR86_RS00790 at 155.254 kb on - strand, within ABZR86_RS00790 at 155.254 kb on - strand, within ABZR86_RS00790 at 155.913 kb on - strand at 155.913 kb on - strand at 155.913 kb on - strand at 155.913 kb on - strand at 155.913 kb on - strand at 155.913 kb on - strand at 155.913 kb on - strand at 155.913 kb on - strand at 155.913 kb on - strand at 155.913 kb on - strand at 155.913 kb on - strand at 155.913 kb on - strand at 155.913 kb on - strand at 155.915 kb on - strand at 155.915 kb on - strand at 155.915 kb on - strand at 156.007 kb on - strand, within ABZR86_RS00800 at 156.043 kb on - strand at 156.044 kb on + strand at 156.294 kb on + strand at 156.474 kb on + strand, within ABZR86_RS00805 at 156.474 kb on + strand, within ABZR86_RS00805 at 156.642 kb on + strand, within ABZR86_RS00805 at 156.645 kb on + strand, within ABZR86_RS00805 at 156.645 kb on + strand, within ABZR86_RS00805 at 156.645 kb on + strand, within ABZR86_RS00805 at 156.675 kb on + strand, within ABZR86_RS00805 at 156.675 kb on + strand, within ABZR86_RS00805 at 156.675 kb on + strand, within ABZR86_RS00805 at 157.457 kb on + strand at 157.457 kb on + strand at 157.459 kb on + strand at 157.459 kb on + strand at 157.459 kb on + strand at 157.460 kb on - strand at 157.460 kb on - strand at 157.460 kb on - strand at 157.571 kb on + strand at 157.571 kb on + strand at 157.571 kb on + strand at 157.571 kb on + strand at 157.571 kb on + strand at 157.571 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Cycloserine 0.032 mg/ml remove 155,251 + ABZR86_RS00790 0.60 -0.4 155,251 + ABZR86_RS00790 0.60 -0.1 155,251 + ABZR86_RS00790 0.60 +0.1 155,251 + ABZR86_RS00790 0.60 -0.2 155,252 - ABZR86_RS00790 0.60 -0.1 155,253 + ABZR86_RS00790 0.61 +0.1 155,253 + ABZR86_RS00790 0.61 +0.3 155,253 + ABZR86_RS00790 0.61 -0.1 155,253 + ABZR86_RS00790 0.61 -0.0 155,254 - ABZR86_RS00790 0.61 -0.6 155,254 - ABZR86_RS00790 0.61 -0.3 155,913 - +1.0 155,913 - -0.3 155,913 - +0.3 155,913 - -0.5 155,913 - +0.1 155,913 - +0.2 155,913 - +0.5 155,913 - -0.7 155,913 - -0.0 155,913 - +1.0 155,913 - -0.2 155,913 - +0.8 155,913 - +1.4 155,915 - +0.2 155,915 - -0.2 155,915 - +1.2 156,007 - ABZR86_RS00800 0.83 -0.1 156,043 - +1.2 156,044 + +1.6 156,294 + -0.0 156,474 + ABZR86_RS00805 0.21 +0.5 156,474 + ABZR86_RS00805 0.21 -0.3 156,642 + ABZR86_RS00805 0.33 -1.0 156,645 + ABZR86_RS00805 0.33 +0.0 156,645 + ABZR86_RS00805 0.33 -0.1 156,645 + ABZR86_RS00805 0.33 -0.7 156,675 + ABZR86_RS00805 0.36 +0.7 156,675 + ABZR86_RS00805 0.36 -1.0 156,675 + ABZR86_RS00805 0.36 +1.0 157,457 + -0.0 157,457 + +0.9 157,459 + +0.2 157,459 + +0.2 157,459 + -0.8 157,460 - -0.6 157,460 - +0.5 157,460 - +0.1 157,571 + +0.3 157,571 + +0.6 157,571 + -0.1 157,571 + -0.3 157,571 + +1.6 157,571 + -0.9
Or see this region's nucleotide sequence