Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_2635
Experiment: MoYLS4 with Cephalothin 1.25 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Cephalothin 1.25 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,330,059 | + | DvMF_2634 | 0.49 | -1.9 | |
3,330,059 | + | DvMF_2634 | 0.49 | -1.7 | |
3,330,059 | + | DvMF_2634 | 0.49 | -1.8 | |
3,330,059 | + | DvMF_2634 | 0.49 | -1.9 | |
3,330,059 | + | DvMF_2634 | 0.49 | -1.8 | |
3,330,059 | + | DvMF_2634 | 0.49 | -2.6 | |
3,330,067 | - | DvMF_2634 | 0.50 | -1.4 | |
3,330,090 | - | DvMF_2634 | 0.52 | -2.8 | |
3,330,176 | - | DvMF_2634 | 0.58 | -2.3 | |
3,330,291 | + | DvMF_2634 | 0.66 | -2.3 | |
3,330,449 | - | DvMF_2634 | 0.77 | -1.8 | |
3,330,452 | + | DvMF_2634 | 0.78 | -2.3 | |
3,330,471 | - | DvMF_2634 | 0.79 | -1.8 | |
3,330,811 | + | -0.3 | |||
3,330,956 | + | -0.2 | |||
3,331,032 | - | +0.7 | |||
3,331,070 | - | DvMF_2635 | 0.16 | -0.3 | |
3,331,351 | - | -0.0 | |||
3,331,759 | - | DvMF_2636 | 0.34 | -0.0 | |
3,331,839 | + | DvMF_2636 | 0.43 | -0.8 | |
3,331,839 | + | DvMF_2636 | 0.43 | +0.1 | |
3,331,862 | + | DvMF_2636 | 0.45 | -1.1 | |
3,331,863 | - | DvMF_2636 | 0.46 | -0.3 | |
3,331,897 | - | DvMF_2636 | 0.49 | -0.2 | |
3,331,897 | - | DvMF_2636 | 0.49 | -0.6 |
Or see this region's nucleotide sequence