Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_2568
Experiment: MoYLS4 with Cephalothin 1.25 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Cephalothin 1.25 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,244,834 | + | DvMF_2567 | 0.26 | -0.5 | |
3,244,869 | + | DvMF_2567 | 0.29 | -0.5 | |
3,244,909 | + | DvMF_2567 | 0.32 | -0.4 | |
3,244,941 | - | DvMF_2567 | 0.35 | -0.7 | |
3,244,970 | + | DvMF_2567 | 0.38 | -0.2 | |
3,245,001 | + | DvMF_2567 | 0.40 | -0.1 | |
3,245,268 | + | DvMF_2567 | 0.63 | +0.4 | |
3,245,460 | - | DvMF_2567 | 0.80 | -0.7 | |
3,245,653 | + | +0.0 | |||
3,245,791 | + | -0.7 | |||
3,245,855 | + | -0.3 | |||
3,245,855 | + | -0.2 | |||
3,245,878 | - | -0.0 | |||
3,245,915 | - | -0.2 | |||
3,245,977 | - | DvMF_2568 | 0.15 | +0.5 | |
3,246,247 | + | DvMF_2568 | 0.37 | +0.3 | |
3,246,516 | + | DvMF_2568 | 0.58 | -0.0 | |
3,246,630 | - | DvMF_2568 | 0.68 | -0.7 | |
3,246,716 | + | DvMF_2568 | 0.75 | -0.0 | |
3,246,972 | + | +0.2 | |||
3,246,991 | + | -0.4 | |||
3,247,361 | + | +0.6 | |||
3,247,708 | + | -0.1 | |||
3,247,840 | + | DvMF_2569 | 0.15 | -0.4 | |
3,247,959 | + | DvMF_2569 | 0.27 | -0.1 | |
3,248,023 | + | DvMF_2569 | 0.34 | +0.0 |
Or see this region's nucleotide sequence